FastQCFastQC Report
Thu 18 May 2023
G202M4_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M4_CKDL230013148-1A_H5NKYDSX7_L1_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9250365
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAGGTATCCACAACTGGCTCTAGAGTAGATCCAAGTACACCTTCATCTC192350.20793774083509137No Hit
GGCTGGCGTCTGAAGCCCCAGCCTAGCAGCATCGGACCTGAGTTCCTCTG167390.18095502177481645No Hit
AGGCTATCACTGGCTTCCCTTTTGTCTACATAAATGCTTTCACGGGCCTG155230.16780959454032354No Hit
AAGTCCAGCAATATTTCAAATCTAAGTTTGCTCTGAGTCAACTACAGACC155060.16762581800826237No Hit
CGGCTTGCTTGCTTGCTCGCTTTCAGATCTCTAAAGGCATCTTGGTTTCT140810.152221020467841No Hit
GAGCTATTTACTTAAACCTTCAGTATCCTGGCCTTTGTCCCCTCTGCAGA128770.13920531784421478No Hit
TGACTTAGGAGGAAGGTCAGAAAAACATGGTGATTTCGGGCACAGAATCT121680.13154075541884022No Hit
TCAATCAGTGGCATCAATTTGAACAAATTATTGAGAAATGATAAAGCTGT117740.1272814640287167No Hit
TTAGCTCCAGACTGACACAAATGGTTTGAAGCCTGTTGTTTGCTGCTTCT113120.12228706651034851No Hit
TTATGGAAAAAGTCAACAACAGGAGTCAGAGCAGCCGGAAAAGCATGGAC112030.12110873462830928No Hit
TTCCTGTGATTTTTTTTTCTCTTCCAGAGTTCAAAAACTGGTGACGAAAG110920.11990878197779223No Hit
CTCCTGCCTGATGGAGTATCGATTCTCCGAGTGCAAAGTCCAGCATGCCG109270.11812506857837501No Hit
TCTGTCGCCCTGTAGAGGATCCTGGCTCTGGGCCCTGTTCTGCACTGTCT104540.11301175683337901No Hit
TACTGAAAATGCCCCATGAGTATAAACTCCCCAGGGTGATAATTATAAGA97170.10504450364931545No Hit
TATAAAATCAAGGATTGATCAAGGCTGTGGACTTTGGTTCTTATCACTTG95510.10324997986565937No Hit
GGTGCTCGGCTCCCAATCACAGTTTATTTTGTAAAGAGCAGACTTCCAAT92590.10009334766790283No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)