FastQCFastQC Report
Thu 18 May 2023
G202M5_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M5_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12829123
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGGAGGATGAGGAGGAGGAGGAAGAAGAGGAGGAAGAAGAAGAAGAA356670.27801588619892414No Hit
GGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAGGAGGCAG312070.24325123393079948No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT304220.23713234334100625No Hit
GGCCAGTGGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAG277480.21628914151029652No Hit
CTGGAATCAGACGCCCACAGGAGCCAGGCAGGACACACAGGGCCTGTGCT275320.2146054722524681No Hit
GCACAATCTCTGCCTCAGTGACATGGCCAGAGGGGCTGGTGACATGGGCA207810.16198301318024622No Hit
GGGCAATGTCACAGGAGAGGCAGTCTGTGTATTTGAGGAGTGTCAGGAAA206600.161039846605259No Hit
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA198140.15444547534543085No Hit
AAACAGACATCTGACACACAAGAAGGAAAAGGCCACGGAGACCAAGCATT189160.1474457763013107No Hit
ATGGCTCCCACTGGGAATCCTGGGCTGGAATACTGACCCAAGTTCAGTGC163920.12777178923298185No Hit
TAGGGAAGTATGACATTCCTGGCTGCAGACCAACTCCACATAACCCTGGA157160.12250252803718541No Hit
ACCAGAGAGGACTGCAGGAAAGCTTGGGAAGTGGCGGGGTAAAACAAACA152470.11884678321347454No Hit
TCAGCTGGGGTGGGGGTGCCCAACACATTGTTTCATGCAGAGTTTCTAAA150020.11693706576825244No Hit
GCCCACCACCCAGCAGAGGTAGTGGAAGAGAAAAGATATCAGGATATGGG143390.11176913651852896No Hit
CTGTTGACAGACAGCACAGAGTGCCATGGGTCAGAGAAATTGGCAGTCAC139440.10869020431092602No Hit
GCCAAGCTGCACCCCCATGACCTACTTAATCCAACCAGGCCAAGCCCCAC138040.10759893719937053No Hit
ACCTAGTGGGTCCACATCAACAAGCCAGCAGGGTGGGCTGGATCAGCACA134210.10461354217275803No Hit
CCCGCATCATGAGACCCCAGTCAGCACAGGCTTCCAGGTACGGTAAAGGG134130.1045511840520977No Hit
GAGAGATAGGAGTGCCCAGCCAGCCACAAAGGCAGAAGAAAAAACACACG133340.10393539761057713No Hit
GCACAATGGGGCCCAATCATAGAAGAGACAGCAGGGCCTGGTCACCCTGC132550.10331961116905654No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG132420.10321827922298352No Hit
TAGAGTTCAAGGGTACTGAGCCCAGAGAGCCCTTTAAAGGCTGAGAGTCA130680.1018619900986217No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)