FastQCFastQC Report
Thu 18 May 2023
G202M8_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M8_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8811250
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA216290.24547027947226557No Hit
AGAAGGAGGATGAGGAGGAGGAGGAAGAAGAGGAGGAAGAAGAAGAAGAA212070.24068094765214926No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT184690.2096070364590722No Hit
CTGGAATCAGACGCCCACAGGAGCCAGGCAGGACACACAGGGCCTGTGCT176040.19979004114058732No Hit
AAACAGACATCTGACACACAAGAAGGAAAAGGCCACGGAGACCAAGCATT173990.19746346999574407No Hit
GAGAGATAGGAGTGCCCAGCCAGCCACAAAGGCAGAAGAAAAAACACACG156350.1774436090225564No Hit
GGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAGGAGGCAG147440.16733153638814016No Hit
GGGCAATGTCACAGGAGAGGCAGTCTGTGTATTTGAGGAGTGTCAGGAAA145310.16491417222301036No Hit
GCCCACCACCCAGCAGAGGTAGTGGAAGAGAAAAGATATCAGGATATGGG125670.14262448574265854No Hit
ACCAGAGAGGACTGCAGGAAAGCTTGGGAAGTGGCGGGGTAAAACAAACA119010.13506596680380195No Hit
GCACAATCTCTGCCTCAGTGACATGGCCAGAGGGGCTGGTGACATGGGCA115640.13124131082423038No Hit
CCCGTTTTCTAAGCCAAACTGAATTCACATTATCAGATATTTTCAAACTA105350.11956305858987089No Hit
GAGCAGAATCAGAGACAGCGACTGCCACAAGAAGAGATAAAGTGGAGCTT105270.11947226556958433No Hit
CCCGCATCATGAGACCCCAGTCAGCACAGGCTTCCAGGTACGGTAAAGGG105050.11922258476379627No Hit
AGGGTAATCTGAGTCCAAGGCCATTCTGGTCTGCAGAGTGCATTCCAGGA103180.11710029791459782No Hit
ATGGCTCCCACTGGGAATCCTGGGCTGGAATACTGACCCAAGTTCAGTGC102550.11638530287984113No Hit
GGCCAGTGGGCAGAGGGCAGAGGGTAAGGGCAGAGGGTAAAGGGTAGCAG102060.1158291956305859No Hit
TAGAGTTCAAGGGTACTGAGCCCAGAGAGCCCTTTAAAGGCTGAGAGTCA102050.11581784650305008No Hit
CTGAGCAGTAGAGCAGGGGTGCTGTGGCACATAGGACAGGAGATAGAGCT98440.11172081146261881No Hit
TTGCAACTCCAACCCCAGAGGATCTGACACCTCTTATGGTGTCATTCAGA98030.11125549723365016No Hit
GCACAATGGGGCCCAATCATAGAAGAGACAGCAGGGCCTGGTCACCCTGC96860.10992764931195913No Hit
CTGTTGACAGACAGCACAGAGTGCCATGGGTCAGAGAAATTGGCAGTCAC94020.10670449709178607No Hit
TGAGAGACATCTATCCTGGGGAAACACAAATAAACATTTACTAACCCCAG93190.10576251950631295No Hit
GCCAAGCTGCACCCCCATGACCTACTTAATCCAACCAGGCCAAGCCCCAC92180.10461625762519507No Hit
TCTAGCCCACTACCCATCAGAGGTAGTAGAAAGGAAAGGCTGATAGGGCA91900.1042984820541921No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)