FastQCFastQC Report
Thu 18 May 2023
G202M9_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG202M9_CKDL230013148-1A_H5NKYDSX7_L1_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13465061
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGAGATAGGAGTGCCCAGCCAGCCACAAAGGCAGAAGAAAAAACACACG214320.15916749281715098No Hit
CTGGAATCAGACGCCCACAGGAGCCAGGCAGGACACACAGGGCCTGTGCT205860.15288456546910556No Hit
AACTATAGCTTTAAAGCCACAGAAAAATATAAAACCAAATAGTGTAGATA205810.15284743232875067No Hit
AGAAGGAGGATGAGGAGGAGGAGGAAGAAGAGGAGGAAGAAGAAGAAGAA181470.13477101960399585No Hit
GCACAATCTCTGCCTCAGTGACATGGCCAGAGGGGCTGGTGACATGGGCA173130.12857721179280213No Hit
CTCCTGAGCAAACCCTGCAGGACAGGAGACATGACAAATGGTGGGATTGT146270.10862928879416144No Hit
GGGCAATGTCACAGGAGAGGCAGTCTGTGTATTTGAGGAGTGTCAGGAAA138030.10250974726367745No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG137410.10204929632327696No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)