FastQCFastQC Report
Thu 4 Jan 2024
G219M13_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M13_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19378291
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT301960.15582385464229018No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC264270.13637425508781967No Hit
AGTGTCTCTTCAGGTTCGTGTACCTGTGCCCCAGTGCCCTGGGCACAGGA242880.12533613000238256No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT238460.12305522710955265No Hit
TGGTTATAAAGTCCACGCAGCTCGAGGGCCTCAGATGCCCTGTATTCCAG231580.11950486242569068No Hit
AGACAGGACACCCTCCAGCTCTGGTTCTTGATGACCTCAGCAGCTTCCCC211180.10897761830493721No Hit
GAAGTCATGGTTGTTTGGATAGTTCAGGCCAAACAGGGCCATTTAGTTGG199940.10317731321095344No Hit
AATGCCCTTCACCCCTGCAGCCCAGACAGGTCTTGGACCTTGTGCTTTGC199110.10274899886682475No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)