FastQCFastQC Report
Thu 4 Jan 2024
G219M13_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M13_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19378291
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG843240.4351467319796158No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG323580.166980669244775No Hit
CAGGAGGTGCACAACATCACAGTACAGGCACCCAGAGTCTCCCTGGCCTT268450.1385313080498172No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG262830.13563115550282528No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT251240.12965023592637762No Hit
CAGGTGCCGGCCGCGACCCTCTTCTCAGAGCCCGTTTCTCTTCGGACCCC240880.12430404724544594No Hit
GCTGCAGGAAGGACACTGGGGACCCTAACAGCCCTGAAGCCCTGGGGCAA215040.11096953802582489No Hit
AAGGACAGGTAAAGTCCAAAGTGAGGGAGTGAGTCACTGCCTTCACAGGC205440.10601554079252913No Hit
AATGCCCGTGTAGGAGTGCGACTCACCCCTTACATGGCAGGCGGGCGGGC198030.10219167417807896No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC196680.10149501831714675No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA194520.1003803689396552No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)