FastQCFastQC Report
Thu 4 Jan 2024
G219M14_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M14_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18728932
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC271410.14491483016757176No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT266040.1420476084808253No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT217580.11617320197435711No Hit
CCACCCTGTCCCAACCCCCATGCCCTGTTCCTGCAGAGCCTGGCTCAAAG215580.11510533542435843No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT207150.11060427791611395No Hit
AATGCCCTTCACCCCTGCAGCCCAGACAGGTCTTGGACCTTGTGCTTTGC197430.10541444648312034No Hit
TGGTTATAAAGTCCACGCAGCTCGAGGGCCTCAGATGCCCTGTATTCCAG190920.10193854086287461No Hit
TTGGACCACGAACAACAAGATTTTTCCCTTCTGTTAACAGATCAAAGACA187610.10017122172262678No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)