FastQCFastQC Report
Thu 4 Jan 2024
G219M17_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M17_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17979181
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG897350.4991050482221632No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG287870.1601129662135333No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT241660.13441101683107812No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG230760.12834844924248776No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA220470.12262516295931389No Hit
CAGGTGCCGGCCGCGACCCTCTTCTCAGAGCCCGTTTCTCTTCGGACCCC198750.11054452369104022No Hit
CAGGAGGTGCACAACATCACAGTACAGGCACCCAGAGTCTCCCTGGCCTT190450.10592807314193012No Hit
AACCTTGAAAGCTGCAAAAGAGAAACAGCACGTCCCAACAAGGGAGGCAT183720.10218485480512154No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)