FastQCFastQC Report
Thu 4 Jan 2024
G219M20_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M20_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18118358
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG789840.43593354320518446No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA464380.25630357894462624No Hit
TATGCTCCTTCTCAGCCAGGGGGTGGGGGATGTGGGGGCGGGGGTGGAGT339320.18727966408435026No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT309320.17072187225796068No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG285990.15784542948097174No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC271220.14969347663844593No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA270330.14920226214759638No Hit
CACTCCAGGCAGGTCAGGGCTTGAATCCCACACTACGGCTGTAAGCCTGG266890.1473036353515037No Hit
GGGACGTTTTCCAACCTCTGAACAGAACACGGGTTTCAAGGCACTGTTGT257410.1420713731343646No Hit
TGAGAGTCAGCACACAGAGGCTATGGTCCAGGGGTGACCACGGTTCACTT235360.12990139614196827No Hit
CTGGTGCAGGCGGCAGCCCAGAGCAGCATGTCAATAGCCAGGCCAGACAC225630.12453115232627593No Hit
ATAGCTTCTTTCCCACCACCTGTCGTTCAGGAAGCCTGGTGCAGGCGGCA211450.1167048360563358No Hit
ACCCGCGTGCCTCCTGGGACCACAGCATGGGGCCCCGCGGATTCTGGCCA209270.11550163651695149No Hit
ACCAAGAGCAGGGAGAAGAGAACCATGAGGCCGATGTAGGTGGAGTGAGG198170.10937525354118734No Hit
GGTCAGATAGAGACAGTATACACTCTTGTGACCCCATGAGAGAGGACCAA192680.10634517763695805No Hit
AATGCCCGTGTAGGAGTGCGACTCACCCCTTACATGGCAGGCGGGCGGGC192080.10601402180043025No Hit
TGGCCAATGTTGGGCTGTGGGTGGCCACCACCACAGAGATGTTCCTGAGA187410.10343652553945562No Hit
GGGGGAACCAGGCAGAGAAGAGGAGGCCCTGCCGAGTAGTACAAGCCCGC186110.10271902122697874No Hit
CAAGTATGTTTGCTGCTTCAGATTCCAAGTAGACATCTTGAAAGCTAAGG185360.10230507643131899No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA184900.10205119028998103No Hit
GTAAGTAAGGAGTGGGGGGCCAAGATGGTAGGAGTTTGGGCACTAGAGTA182140.10052787344195317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)