FastQCFastQC Report
Thu 4 Jan 2024
G219M21_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M21_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18188513
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC472720.25990030081073695No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT348910.1918298653661242No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC328330.18051503165761817No Hit
CCACCCTGTCCCAACCCCCATGCCCTGTTCCTGCAGAGCCTGGCTCAAAG285070.15673078937239124No Hit
TCCCCTGAGATGTGATCCTGAGACAGAATCCCAGGGCAAAGTCCTGCAAG259410.14262298407791774No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC256360.14094610153122467No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT252200.1386589436970466No Hit
AAGGCAGAGACGTCTCTCTAGGAACTGTCCAGGTTTTGGATGGAGAAGTT239730.13180296817007525No Hit
AGGCTGGACCGGCAGTTGATGGCAGAGATTCAGGCATCATGGAGAGTCCA234470.12891103302397508No Hit
TAGGAGGAAGGTCAGAAAAACATGGTGATTTCGGGCACAGAATCTGTACT234040.12867462007476918No Hit
CCAGGTCTGGGGGAGTTGGGTCTTGCTCTGCTGCAGTTTGGCTGTGACCC215660.11856934099010732No Hit
TGTGTACCTCTTTGCCTCTAAAGGACATCAGCAGGGCCAGCTTGTGCTGT198000.10885991614597632No Hit
AGGAACGGCAGACTTCCTTTTCATGGTGGTGAGTGCCACCCTGTCCCAAC194080.10670470972530849No Hit
TCTTTTGACCAGGCAGCGGTGTAAGTGACTTTATGGAAGACAAGCCAGCG193560.10641881499603623No Hit
GACAAGAAGTTCCTGTTTCCCTGGCTCTTCCTACTGATGTCTCTTCAAAT187840.10327397297404137No Hit
TTGGACCACGAACAACAAGATTTTTCCCTTCTGTTAACAGATCAAAGACA185940.10222935761708503No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)