FastQCFastQC Report
Thu 4 Jan 2024
G219M21_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M21_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18188513
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG772410.4246691304561291No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA458780.2522361228760152No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT395210.2172854922224813No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG325830.17914053776688618No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA282100.1550978906302016No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC272700.1499297936010492No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG262280.1442009030644781No Hit
GACACAGGGCATCAAAAGGGACTGCCCAGACCAAAGTCAACAGTACTAGG259400.1426174861023548No Hit
GTCCAGACATCTGGAGGGCCTGGCTCACATGGACCGACTGCCTCTGCGCC245480.13496430411875893No Hit
ACTTCATGGCTCCCACTGGGAATCCTGGGCTGGAATACTGACCCAAGTTC233000.12810283061622463No Hit
ATAGCTTCTTTCCCACCACCTGTCGTTCAGGAAGCCTGGTGCAGGCGGCA229970.12643694402065744No Hit
GAGCGAGTGAGCCACCTGTGGCGCCAGCAGGGTCTGAGCTGGCTCACCTC221140.12158223159859191No Hit
AATGCCCGTGTAGGAGTGCGACTCACCCCTTACATGGCAGGCGGGCGGGC206930.1137696083236711No Hit
ACCAAGAGCAGGGAGAAGAGAACCATGAGGCCGATGTAGGTGGAGTGAGG196570.10807370564047758No Hit
ACATGTGTATACAACTCCCCTGGCCAACCCAAACACATCTGTGGCTGGAA192140.10563810246610045No Hit
CAGGCTGGGGCCCTTGTGGCAGCCAGGTGTGGCTGATGGAAAAGCTGCCA190070.10450002152457433No Hit
ACCACTTTACCCTCCCTCTCCCACTGCAACCAGAGATCAACACAAGCAAT186070.10230083129940308No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)