FastQCFastQC Report
Thu 4 Jan 2024
G219M22_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M22_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18542810
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG827150.4460758644455722No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA801440.4322106519993464No Hit
CTTGGGTCACCTCCAGAGCAAGGCATTTCTGCTTTCAGGGAGCAGTACAT565570.3050077091875503No Hit
GACATGGGTAGGAAGCCAGGCATCGATAGCATGCCTAGGTTACTGGGAAG522020.2815215169653359No Hit
GGGGGCGTCACCGGGTCCCCTACCTGTAGGCCAGGGTCATGCACTCGAAG489690.2640861875842982No Hit
TGTTTTCCTAACTGCAGATTGAGTTGATTTAGGGATGACATGATCAAGAG468280.2525399332679351No Hit
TGAGAGTCAGCACACAGAGGCTATGGTCCAGGGGTGACCACGGTTCACTT441340.23801139093805093No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC423500.22839041116206227No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA379700.2047693957927628No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG373580.20146892515212098No Hit
GGTCAGATAGAGACAGTATACACTCTTGTGACCCCATGAGAGAGGACCAA364070.19634025263700594No Hit
ATAGCTTCTTTCCCACCACCTGTCGTTCAGGAAGCCTGGTGCAGGCGGCA362470.19547738449566168No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA329680.17779398052398745No Hit
GGCAGGAGCAAGGTCCTGGTGTCAGGCAAGTTGATGGTGGCACTGTGCCA324470.17498426613873516No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT320070.17261137875003843No Hit
GATCACTGAGGTGACATCTTCTGGGAAGGGTTTCCTGAGAGTCAGCACAC280210.15111517617879922No Hit
AAGGACAGGTAAAGTCCAAAGTGAGGGAGTGAGTCACTGCCTTCACAGGC279550.1507592430704947No Hit
GGCAAGAACAAGGTGCAAGAGAGGGCATGTTTGAGCTGAATTCACGAAGA278680.15029005851863875No Hit
GGCATGAGACCCCTAGTAACCGGAGTAATAAATGATTGTGAGCCACCCTG278660.15027927266687197No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG274650.1481167093876279No Hit
AGCCAGGCCAGACACGCGGCTGCCAGCTCTTGGACTCTGCTCACCTCCGG273500.14749652291103668No Hit
TACTGACCCAAGTTCAGTGCCAGATCAACCAGCTTGGCAGGAGCAAGGTC270840.14606200462605182No Hit
AGCACTGAGCAGTAAGGGGAGGGGCTAGCCTGGACTCAGACTGTCCTCTG267410.14421223104804504No Hit
GACACAGGGCATCAAAAGGGACTGCCCAGACCAAAGTCAACAGTACTAGG238760.12876149839209913No Hit
AAGAGCTCAGGGGTGGCGTGTTTCACCCAAACCCACAACAACCCTCTACT231650.12492712808900054No Hit
AAGGGCAAAGGGCAGGAGGAGGGCACCAGCTGGTTACTGCGGAGATAAGA222730.12011663820100621No Hit
GCTGCAGGAAGGACACTGGGGACCCTAACAGCCCTGAAGCCCTGGGGCAA218500.11783543055232729No Hit
CAGGCTGGGGCCCTTGTGGCAGCCAGGTGTGGCTGATGGAAAAGCTGCCA218380.11777071544172646No Hit
CTGGAGATGGAAAAGAGAGAGTGCAAGATGATCCAGCAGTGAGCAGTGAG215210.11606115793668813No Hit
TGAACCACAGAGTAGATTCTTTCCATTTTTTATTAATTGCAGCACAGAGA212330.11450799528226843No Hit
CTGGTGCAGGCGGCAGCCCAGAGCAGCATGTCAATAGCCAGGCCAGACAC206930.11159581530523152No Hit
GTACCATGAGCTGACCACCAAGAGCAGCAGCAGTGGAGTACAGGCATCTG203230.10960043272837287No Hit
ACCAAGAGCAGGGAGAAGAGAACCATGAGGCCGATGTAGGTGGAGTGAGG201980.10892631699294768No Hit
GCTGCCAGACTTCCCAGCCTCCAGGTGCCTCCTGCCTCAAGGTGACACTC196890.10618131771829621No Hit
GCTGAGCCTCACAGCACCTGTGGCCTGGATGTGACTCAGCAGCCTTGGCC196760.10611120968181198No Hit
TCCGACTTTCATCCCTGGCTCTGTGAGATAAGGCCTAACAGCAAGGCCAT194600.1049463376909972No Hit
AAACTATAAGGACCCACCAGCTGATAAAATATAAATTATTCACCAACACA193210.10419672099320437No Hit
GAGCATCATAATCAGGAGGCAGCCAGACCTATGCCTTATCAGGCCTTATC192880.1040187544390521No Hit
AGAGGGGCCCAGCTCCCTCCCTGAATAAAAACCATCCCTGATGGGGAGAA188690.1017591184939068No Hit
TCACCATGAGATGACCTTCTCCTTCTGGTAGCATCTCTACTTCCTGGTTC187740.10124679053498363No Hit
GAGCGAGTGAGCCACCTGTGGCGCCAGCAGGGTCTGAGCTGGCTCACCTC187200.10095557253727995No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)