FastQCFastQC Report
Thu 4 Jan 2024
G219M28_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M28_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18292022
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC291570.15939735913285039No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT281440.15385942571029051No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT267550.1462659513529997No Hit
AGACAGGACACCCTCCAGCTCTGGTTCTTGATGACCTCAGCAGCTTCCCC250840.1371308212946606No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC229200.12530052719158113No Hit
TCCCATCATGTTCCTCAGGGCTAGAATGAGGATCTGAGCCGACCAGTTAA208400.11392944968030325No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT198130.1083149801591098No Hit
TGTAGGCAGATGGGTCCTGGGTTGGCTGAAATGCTAAGAAGGGCACTGGG189540.10361894382151958No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)