FastQCFastQC Report
Thu 4 Jan 2024
G219M28_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M28_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18292022
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG902860.49358130008809303No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG292600.15996044614422614No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA280400.15329087183472664No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA266560.14572473179837636No Hit
GCTGCAGGAAGGACACTGGGGACCCTAACAGCCCTGAAGCCCTGGGGCAA247290.13519008450788No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG227130.12416888630464144No Hit
GGTCAGATAGAGACAGTATACACTCTTGTGACCCCATGAGAGAGGACCAA215000.11753758004445873No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT206260.11275954074404677No Hit
TCCAATGGCAGGGACTTCACAGGTCACCCAAGTACACACACTGGCAGAGC193110.1055706143366764No Hit
TGAGAGTCAGCACACAGAGGCTATGGTCCAGGGGTGACCACGGTTCACTT192400.10518246697932027No Hit
GGCAGGAGCAAGGTCCTGGTGTCAGGCAAGTTGATGGTGGCACTGTGCCA189480.10358614263639088No Hit
ATAGCTTCTTTCCCACCACCTGTCGTTCAGGAAGCCTGGTGCAGGCGGCA188430.10301212189663889No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC183390.10025682234582924No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)