FastQCFastQC Report
Thu 4 Jan 2024
G219M33_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M33_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23144317
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC392250.16948004989734627No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC276230.11935111327761369No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT259660.11219168835269583No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT246430.10647538227202816No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC240380.10386134963498814No Hit
AGGCTGGACCGGCAGTTGATGGCAGAGATTCAGGCATCATGGAGAGTCCA231570.10005479962964557No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)