FastQCFastQC Report
Thu 4 Jan 2024
G219M42_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M42_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21571660
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC835890.3874945182707311No Hit
AGGCTGGACCGGCAGTTGATGGCAGAGATTCAGGCATCATGGAGAGTCCA444370.20599712771293444No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC371650.17228623110136168No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC354550.1643591638288384No Hit
ACAGGATAGAACAGTTGTGGGTGACAGACATGCATAATAAATGAGTCTAA321930.14923747175692553No Hit
CCGGTCAGGTTCAGGCATTGACTACACAAGTACCCAGGCTGGACCGGCAG316550.1467434587787866No Hit
CCACCCTGTCCCAACCCCCATGCCCTGTTCCTGCAGAGCCTGGCTCAAAG306170.14193158987300933No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT276360.1281125328324292No Hit
GGCTGGGAAAGTCTGAAACTGCACCCAGATGGCCTTGCTGTTAGGCCTTA261170.12107088652426377No Hit
AGCTTGCCTGAACACTGTTGTAAGCGCCTTTAATACCCTCCACCTTGGTC250770.11624974619477593No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT238890.11074252051070711No Hit
CTGGGCTCATTTCCAGTACTGCCCTTGGCTCACCCTCCATTGCTCTGGAC234150.10854519309130592No Hit
ACCCCACGGTGTCCTCCGGAGGCCCAGGAAATGGCATGCTGGCTGGCAGG226490.10499423781016388No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)