FastQCFastQC Report
Thu 4 Jan 2024
G219M42_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M42_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21571660
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1174560.5444921716733899No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA814600.37762508773084685No Hit
AGGGCGACATCTACGTAAGCACTGGGAGCAGCACAGCTGCAAAAACATCT478190.22167510520748057No Hit
ATAGCTTCTTTCCCACCACCTGTCGTTCAGGAAGCCTGGTGCAGGCGGCA473290.2194036063983949No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG373900.17332926626879896No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC368490.17082134615509423No Hit
CTGGTGCAGGCGGCAGCCCAGAGCAGCATGTCAATAGCCAGGCCAGACAC332360.1540725192219792No Hit
CCACCTCTTCCCTGGCAACATTTAATCACCGACCAACTAGGAAACAAACT330310.15312219829164747No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA317730.14729047277770926No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT281980.13071780289509477No Hit
GGAGGAGAAGGCAGAGGATCAACCAAGGCCAGCAAAGTCCATGGCACAGA241630.11201270555905295No Hit
TCCGACTTTCATCCCTGGCTCTGTGAGATAAGGCCTAACAGCAAGGCCAT233170.10809089332948878No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA231650.1073862651274867No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG225500.1045353023364915No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)