FastQCFastQC Report
Thu 4 Jan 2024
G219M43_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M43_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18798574
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC682470.3630434946820966No Hit
GCAGGGTGTCCGGCAGTGATCACTGGGAACCCTGTTCTTCATTCAAGCTG364970.19414770503337114No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC339980.18085414351109824No Hit
AGGCTGGACCGGCAGTTGATGGCAGAGATTCAGGCATCATGGAGAGTCCA324290.17250776574861476No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC316140.16817233051826166No Hit
CCGGTCAGGTTCAGGCATTGACTACACAAGTACCCAGGCTGGACCGGCAG315620.16789571379190782No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT273150.14530357462220272No Hit
GGCTGGGAAAGTCTGAAACTGCACCCAGATGGCCTTGCTGTTAGGCCTTA239440.1273713633810735No Hit
CAACACTTTGAGGCATGTGTGTACCTGCAGGGCTTCAGATCGGAAGAGCA229610.12214224334250033No Hit
CCACCCTGTCCCAACCCCCATGCCCTGTTCCTGCAGAGCCTGGCTCAAAG224460.11940267384111156No Hit
TGTAGGCAGATGGGTCCTGGGTTGGCTGAAATGCTAAGAAGGGCACTGGG221340.11774297348298866No Hit
CTGGGCTCATTTCCAGTACTGCCCTTGGCTCACCCTCCATTGCTCTGGAC213940.11380650468487663No Hit
TACCATGTAGTCACATAAACCGTGCTGGACTTTACTCTCCCCTGTAAAGA209690.11154569490217714No Hit
GGCTGGATGCTGCTTGTTGACTTGCTCCACATGAGCAGTGCCAAGCCTCA205590.1093646784059259No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT203850.10843907628312657No Hit
TCTTCCAGGCCGCGCCGTTCGGGCTCCGGCTCCGGCCCAGCGCCCGCCGC197730.10518351019603933No Hit
TACCTCCCAGCCTCAGTCTCTGTGCCTCTCTGGAGCCGGTCAGGTTCAGG195520.1040078891090356No Hit
AGCCTGGGGCTTCATGTCAGCCCCTCGCCAGACAGACGGGACCCAGCGCA193400.10288014399390082No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)