FastQCFastQC Report
Thu 4 Jan 2024
G219M43_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M43_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18798574
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1173980.6245048161631834No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA668500.3556120799375527No Hit
TAATCAAACTGCCTGGGAGACTCAGGAAGACAGATTCTGTGTTTAGTACC368910.1962436086907443No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC363000.19309975320468456No Hit
ATAGCTTCTTTCCCACCACCTGTCGTTCAGGAAGCCTGGTGCAGGCGGCA332040.1766304188817726No Hit
CTGGTGCAGGCGGCAGCCCAGAGCAGCATGTCAATAGCCAGGCCAGACAC319830.17013524536488778No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG310650.1652518962342569No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT294780.15680976652803558No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA246950.1313663472559142No Hit
GAAGCCCTGCAGGTACACACATGCCTCAAAGTGTTGAGATCGGAAGAGCG234170.12456795925052613No Hit
GGAGGAGAAGGCAGAGGATCAACCAAGGCCAGCAAAGTCCATGGCACAGA226060.12025380222989254No Hit
TCCAATGGCAGGGACTTCACAGGTCACCCAAGTACACACACTGGCAGAGC225530.11997186595110886No Hit
TGAGAGTCAGCACACAGAGGCTATGGTCCAGGGGTGACCACGGTTCACTT217060.11546620504299954No Hit
TCCGACTTTCATCCCTGGCTCTGTGAGATAAGGCCTAACAGCAAGGCCAT212960.11328518854674828No Hit
GCAGCACAAACAGACTCAAGACAACTGAAACCACAGAAGAACCCGCAGCA211360.1124340601579673No Hit
AGCCAGGCCAGACACGCGGCTGCCAGCTCTTGGACTCTGCTCACCTCCGG210180.11180635297124134No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA199330.10603463858482032No Hit
GGACCGGGGCGACGGCGGCCGCGCGGGGACACGGGGGCGGGGCCGCACCT194140.10327379087371202No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG190300.10123108274063766No Hit
CCGTCACACCCCGCCCCCAGCAGTCAGCTACTCTGAGGGTTTGAGAACTC189570.10084275541325635No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)