FastQCFastQC Report
Thu 4 Jan 2024
G219M4_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M4_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20658438
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG787530.3812146881579333No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG523510.2534121892468347No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG356040.17234604087685623No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA314350.1521654250916744No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA308290.14923199905046064No Hit
GACACAGGGCATCAAAAGGGACTGCCCAGACCAAAGTCAACAGTACTAGG305970.14810897125910488No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT299030.144749569159101No Hit
ACCAAGAGCAGGGAGAAGAGAACCATGAGGCCGATGTAGGTGGAGTGAGG298080.14428970864108895No Hit
AATGCCCGTGTAGGAGTGCGACTCACCCCTTACATGGCAGGCGGGCGGGC235940.11420999012606858No Hit
CCGTCACACCCCGCCCCCAGCAGTCAGCTACTCTGAGGGTTTGAGAACTC234010.11327574717894934No Hit
CACCCACCCCCAGTTCCCGGAGCTGCTGTCTGCTTCCTGAGCTCTGGCCC211710.10248112659824522No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)