FastQCFastQC Report
Thu 4 Jan 2024
G219M7_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M7_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18167962
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC375800.20684763651531196No Hit
AGGACACAATCTTGAAGAGGTGCACTCCAGTGACTTAGGAGGAAGGTCAG313080.17232532740876494No Hit
TCCCATCATGTTCCTCAGGGCTAGAATGAGGATCTGAGCCGACCAGTTAA307650.16933654969115414No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT298170.1641185731233916No Hit
CCTTTTGTGATGTTCAGCTAATGCCTGTCTGGATCAGGACACAATCTTGA271530.1494553984646159No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC268890.1480022910659985No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT260210.14322465007357457No Hit
TAGGAGGAAGGTCAGAAAAACATGGTGATTTCGGGCACAGAATCTGTACT239650.13190802578737232No Hit
AGACAGGACACCCTCCAGCTCTGGTTCTTGATGACCTCAGCAGCTTCCCC230460.12684967086567No Hit
CCACCCTGTCCCAACCCCCATGCCCTGTTCCTGCAGAGCCTGGCTCAAAG226400.12461496782082658No Hit
TGTAGGCAGATGGGTCCTGGGTTGGCTGAAATGCTAAGAAGGGCACTGGG225910.12434526228093168No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT222790.1226279535371111No Hit
AGGCTGGACCGGCAGTTGATGGCAGAGATTCAGGCATCATGGAGAGTCCA213980.11777875801369465No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC206370.11359006585328613No Hit
CCGGTCAGGTTCAGGCATTGACTACACAAGTACCCAGGCTGGACCGGCAG193480.10649515889564279No Hit
CCTTGAGGTCAAGGACTTTAGCCTGAGTCTGAGTTGGAGTTTTGTCAACC189600.10435953135525051No Hit
GGCTGGATGCTGCTTGTTGACTTGCTCCACATGAGCAGTGCCAAGCCTCA182750.10058915799141367No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)