FastQCFastQC Report
Thu 4 Jan 2024
G219M9_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M9_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18970438
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCATCATGTTCCTCAGGGCTAGAATGAGGATCTGAGCCGACCAGTTAA385480.20320036891082854No Hit
CCACTCTTCCCTTCCCTTTGGGGCCTGAAGCCTTCTTGGTCTAATCTGTT384850.20286827325758108No Hit
AGACAGGACACCCTCCAGCTCTGGTTCTTGATGACCTCAGCAGCTTCCCC335700.17695954094470565No Hit
GCTGCCTCTGCCGCCGCCTCCCCTGGGCTCCGGCCTCTTCCAGGCCGCGC304010.16025460245040204No Hit
ATCATGGAGAGTCCAAGAGCCAAACCCGGAGGTGAGCAGAGTCCAAGAGC300560.15843598339690415No Hit
CCACCCTGTCCCAACCCCCATGCCCTGTTCCTGCAGAGCCTGGCTCAAAG294060.1550095996729227No Hit
AGGCAGCAGAGGTAGAGCTTCCTTGTTGCCACAAATGAGAACACAAGAAT293100.1545035491536885No Hit
TGTAGGCAGATGGGTCCTGGGTTGGCTGAAATGCTAAGAAGGGCACTGGG286210.1508715824062681No Hit
GCTTCCCAGTCTGTGTTCTCCCACTTGGGGGGTAGAGGAACGGCAGACTT282330.14882629489102991No Hit
CCTTTTGTGATGTTCAGCTAATGCCTGTCTGGATCAGGACACAATCTTGA273550.14419804118386723No Hit
AGGACACAATCTTGAAGAGGTGCACTCCAGTGACTTAGGAGGAAGGTCAG271600.1431701260666728No Hit
GGCTCAAGGGGACTCCCAGAGAGAAGCCGAGATCAGGAAGGGCTTTTCAG265440.1399229685682534No Hit
GGAAGGGCTTTTCAGTCAGAAGGGCTGGCGTGGCTGGCGTGGCTGACTGG264700.13953288795967705No Hit
AACTTTCCTCCTGATGGACATCGCATTGGCTCTTTCGTGTGTAGGGACAC248180.13082460194118872No Hit
TCCCCTGAGATGTGATCCTGAGACAGAATCCCAGGGCAAAGTCCTGCAAG236240.12453059860821347No Hit
TAGGAGGAAGGTCAGAAAAACATGGTGATTTCGGGCACAGAATCTGTACT235190.12397710585280107No Hit
TTGGACCACGAACAACAAGATTTTTCCCTTCTGTTAACAGATCAAAGACA217140.11446230181928324No Hit
TAAGTGGATTATGCTGTGTAAAAGATACCATGCTTTCCCATCATGTTCCT215040.11335531630845845No Hit
CCTTGAGGTCAAGGACTTTAGCCTGAGTCTGAGTTGGAGTTTTGTCAACC210810.1111255312080828No Hit
GGCTGGATGCTGCTTGTTGACTTGCTCCACATGAGCAGTGCCAAGCCTCA206210.10870070580341898No Hit
CAGTGCCAAGCCTCAGTTGCCCTCCAAGACCTTTATACCTTTAAAATCAC204950.1080365144969241No Hit
CAGCCCATGACCGACTTGTCCCCTGCAGGCTACACTGGCTGGCAGCCTCT204790.1079521727437184No Hit
ACAACACCTCCCTCAGAGAAGGCTGCCGGGCCTTCCCTTAGTCCAGCTGA193620.1020640640980456No Hit
CCTCATCCTGGATGCTGCTCTTGCCATGGAGTTGCTGTGTACCTCTTTGC191370.10087800819359045No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)