FastQCFastQC Report
Thu 4 Jan 2024
G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG219M9_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18970438
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG702040.3700705276283025No Hit
GGGACAGGAGCTAAAGTCCAACTCTGTCAGCAAGCTGCTAGCCAGATGGG408200.21517689786603766No Hit
GGTCAGATAGAGACAGTATACACTCTTGTGACCCCATGAGAGAGGACCAA399730.21071205630571102No Hit
GCTGCAGGAAGGACACTGGGGACCCTAACAGCCCTGAAGCCCTGGGGCAA333610.1758578267934562No Hit
AGGGTTTGAGAACTCCATTTCCCAGAGTGCTGTGCGGGTCGAGGGTGGTG303690.16008591894399066No Hit
GGCAGGCGGGCGGGCGGGCAGTGTCCCTGAATTACTCAACAGAGCCATCT302540.15947971259282467No Hit
TCCAATGGCAGGGACTTCACAGGTCACCCAAGTACACACACTGGCAGAGC299110.15767163625847752No Hit
TACGCCACAAAACACAGGGCAACAGATGCTCCGCAAATGCCCGTGTAGGA298070.1571234148626405No Hit
GGCAGGAGCAAGGTCCTGGTGTCAGGCAAGTTGATGGTGGCACTGTGCCA293360.15464060450264774No Hit
AGACTAAGTGGCTGCTACTCGCTTGTCCAGCACAGATAGCTTCTTTCCCA293000.15445083555793493No Hit
CCAAGCCGGTGGAGGGGGCGGGGGCCAGGAGGAGGGCCGTTTGCAGGGGA292160.15400804135360502No Hit
TACTGACCCAAGTTCAGTGCCAGATCAACCAGCTTGGCAGGAGCAAGGTC283760.14958009931030586No Hit
TCAGCAGCCTTGGCCTGCTGGGGGCACTTTATCGATTTCTTCTCAGAACC271020.14286438721130215No Hit
GCTGAGCCTCACAGCACCTGTGGCCTGGATGTGACTCAGCAGCCTTGGCC267560.14104049679822891No Hit
GCCTCAAGCAGTGCTGAGACAGTAAACAAGTTCACACAAGTACACTCATC264400.13937474717241638No Hit
GACACAGGGCATCAAAAGGGACTGCCCAGACCAAAGTCAACAGTACTAGG246170.12976505866654212No Hit
ACTTCATGGCTCCCACTGGGAATCCTGGGCTGGAATACTGACCCAAGTTC236500.12466765395717273No Hit
ATGAGAGAGGACCAACAGAGTACACCTGACCTTCGCACACATATGAACTT233050.12284903490367485No Hit
TGAGAGTCAGCACACAGAGGCTATGGTCCAGGGGTGACCACGGTTCACTT223120.11761457484534621No Hit
ACCAAGAGCAGGGAGAAGAGAACCATGAGGCCGATGTAGGTGGAGTGAGG222600.1173404641474277No Hit
GATCACTGAGGTGACATCTTCTGGGAAGGGTTTCCTGAGAGTCAGCACAC219110.1155007596556284No Hit
GGACAAACACATTCCGGAAAGTGGTGACCCACTGCTAAGGGCCACATGGT211650.11156832541241272No Hit
AAACTATAAGGACCCACCAGCTGATAAAATATAAATTATTCACCAACACA211090.11127312927619278No Hit
ATGGAAAAGCTGCCAGAACAAAGGGGTCAGCTCCAGCAGCAGGCACAGGC197370.10404082393880415No Hit
TCGCTAAGTGTAAGACTGACACAGGCACAGGCAGAGCAGGTAGACAGGAA196720.103698185566406No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)