[2024-01-05 01:55:46,023] multiqc [DEBUG ] This is MultiQC v1.12 [2024-01-05 01:55:46,023] multiqc [DEBUG ] No MultiQC config found: /usr/lib/python3.8/site-packages/multiqc_config.yaml [2024-01-05 01:55:46,024] multiqc [DEBUG ] No MultiQC config found: /usr3/graduate/tingyac/.multiqc_config.yaml [2024-01-05 01:55:46,025] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2024-01-05 01:55:46,025] multiqc [DEBUG ] Command used: /usr/bin/multiqc /projectnb2/wax-dk/Sophia/G219 -o Job_Summary/G219_MULTIQC [2024-01-05 01:55:46,268] multiqc [WARNING] MultiQC Version v1.19 now available! [2024-01-05 01:55:46,269] multiqc [DEBUG ] Command : /usr/bin/multiqc /projectnb2/wax-dk/Sophia/G219 -o Job_Summary/G219_MULTIQC [2024-01-05 01:55:46,269] multiqc [DEBUG ] Working dir : /projectnb2/wax-dk/Sophia/G219/Scripts/16_MULTIQC [2024-01-05 01:55:46,269] multiqc [DEBUG ] Template : default [2024-01-05 01:55:46,269] multiqc [DEBUG ] Running Python 3.8.1 (default, Dec 26 2019, 14:42:08) [GCC 9.2.0] [2024-01-05 01:55:46,270] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, pbmarkdup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, odgi, pangolin, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pychopper, pycoqc, minionqc, multivcfanalyzer, clusterflow, checkqc, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype, whatshap [2024-01-05 01:55:46,278] multiqc [DEBUG ] Using temporary directory for creating report: /scratch/tmpufrhw21v [2024-01-05 01:55:46,423] multiqc [INFO ] Search path : /projectnb2/wax-dk/Sophia/G219 [2024-01-05 01:55:49,229] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2024-01-05 01:55:49,231] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2024-01-05 01:55:49,232] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2024-01-05 01:55:49,238] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2024-01-05 01:55:49,251] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_Paired_End_Reads.txt [2024-01-05 01:55:49,259] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: copy_from_indexfile.py [2024-01-05 01:55:49,261] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: copy_from_indexfile.py [2024-01-05 01:55:49,327] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: copy_samples.py [2024-01-05 01:55:49,331] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: copy_samples.py [2024-01-05 01:55:49,332] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: copy_samples.py [2024-01-05 01:55:49,337] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: copy_samples.py [2024-01-05 01:55:49,349] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: copy_samples.py [2024-01-05 01:55:49,376] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:55:49,376] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:55:49,378] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_alignments.bam [2024-01-05 01:55:49,378] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_sorted_mapped.bam [2024-01-05 01:55:49,378] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_alignments.bam.bai [2024-01-05 01:55:49,378] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_sorted_mapped.bam.bai [2024-01-05 01:55:49,410] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:55:49,412] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:55:49,412] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:55:49,416] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:55:49,416] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:55:49,506] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:55:49,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-1-removed.bed [2024-01-05 01:55:49,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:55:49,549] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48-W400-normalized.wig [2024-01-05 01:55:49,551] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48-W400-normalized.wig [2024-01-05 01:55:49,552] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48-W400-normalized.wig [2024-01-05 01:55:49,556] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48-W400-normalized.wig [2024-01-05 01:55:49,770] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48-W400-normalized.wig [2024-01-05 01:55:49,784] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_read_SICER.out1 [2024-01-05 01:55:49,787] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_read_SICER.out1 [2024-01-05 01:55:49,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_read_SICER.out1 [2024-01-05 01:55:49,791] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_read_SICER.out1 [2024-01-05 01:55:49,851] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_read_SICER.out1 [2024-01-05 01:55:49,877] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48-W400.graph [2024-01-05 01:55:49,881] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48-W400.graph [2024-01-05 01:55:49,881] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48-W400.graph [2024-01-05 01:55:49,889] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48-W400.graph [2024-01-05 01:55:49,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48-W400.graph [2024-01-05 01:55:50,108] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48-W400.graph [2024-01-05 01:55:50,147] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:50,157] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:50,158] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:50,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:50,311] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:50,325] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:50,327] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:50,328] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:50,333] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:50,342] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:50,355] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland [2024-01-05 01:55:50,358] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland [2024-01-05 01:55:50,359] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland [2024-01-05 01:55:50,364] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland [2024-01-05 01:55:50,420] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48-W400-G2400-E100.scoreisland [2024-01-05 01:55:50,424] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:55:50,424] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:55:50,424] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:50,425] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:55:50,430] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:50,434] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:50,449] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:55:50,449] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:50,449] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_StrgtPksRm_tab.bed [2024-01-05 01:55:50,449] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_filtered_StrgtPks.bam.bai [2024-01-05 01:55:50,449] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_StrgtPks_tab.bed [2024-01-05 01:55:50,449] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_filtered_StrgtPks.bam [2024-01-05 01:55:50,450] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_filtered_StrgtPks_sorted.bam [2024-01-05 01:55:50,450] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:55:50,456] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,459] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,466] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,467] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,479] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_RiPPM_norm.bw [2024-01-05 01:55:50,486] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_metrics [2024-01-05 01:55:50,490] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_metrics [2024-01-05 01:55:50,507] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_hist.pdf [2024-01-05 01:55:50,539] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:50,542] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:50,543] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:50,548] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:50,558] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:50,591] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:50,595] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:50,596] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:50,602] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:50,603] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:50,675] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:50,680] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:55:50,724] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_read_MACS2_peaks.out1 [2024-01-05 01:55:50,728] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_read_MACS2_peaks.out1 [2024-01-05 01:55:50,729] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_read_MACS2_peaks.out1 [2024-01-05 01:55:50,734] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_read_MACS2_peaks.out1 [2024-01-05 01:55:50,735] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_read_MACS2_peaks.out1 [2024-01-05 01:55:50,805] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_read_MACS2_peaks.out1 [2024-01-05 01:55:50,832] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:50,837] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:50,837] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:50,843] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:50,843] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:50,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:50,994] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:50,999] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:50,999] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:51,011] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:51,011] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:51,078] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:51,083] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_summits.bed [2024-01-05 01:55:51,105] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:55:51,126] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:51,130] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:51,130] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:51,136] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:51,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:51,150] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:51,150] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:55:51,157] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:51,161] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:51,177] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:55:51,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:51,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:55:51,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:55:51,181] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:55:51,183] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:55:51,185] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_alignments.bam.bai [2024-01-05 01:55:51,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_alignments.bam [2024-01-05 01:55:51,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_sorted_mapped.bam [2024-01-05 01:55:51,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_sorted_mapped.bam.bai [2024-01-05 01:55:51,217] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:55:51,227] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:55:51,227] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:55:51,234] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:55:51,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:55:51,333] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:55:51,338] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_filtered_StrgtPks.bam [2024-01-05 01:55:51,338] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:55:51,338] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_filtered_StrgtPks.bam.bai [2024-01-05 01:55:51,338] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_filtered_StrgtPks_sorted.bam [2024-01-05 01:55:51,338] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_StrgtPks_tab.bed [2024-01-05 01:55:51,339] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_StrgtPksRm_tab.bed [2024-01-05 01:55:51,350] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland [2024-01-05 01:55:51,354] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland [2024-01-05 01:55:51,354] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland [2024-01-05 01:55:51,361] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland [2024-01-05 01:55:51,501] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland [2024-01-05 01:55:51,522] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:51,525] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:51,525] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:51,533] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:51,557] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:51,592] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37-W400.graph [2024-01-05 01:55:51,597] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37-W400.graph [2024-01-05 01:55:51,597] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37-W400.graph [2024-01-05 01:55:51,604] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37-W400.graph [2024-01-05 01:55:51,604] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37-W400.graph [2024-01-05 01:55:51,737] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37-W400.graph [2024-01-05 01:55:51,824] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37-W400-normalized.wig [2024-01-05 01:55:51,858] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37-W400-normalized.wig [2024-01-05 01:55:51,862] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37-W400-normalized.wig [2024-01-05 01:55:51,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37-W400-normalized.wig [2024-01-05 01:55:52,023] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37-W400-normalized.wig [2024-01-05 01:55:52,051] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:52,056] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:52,056] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:52,062] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:52,205] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:52,213] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:55:52,221] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_read_SICER.out1 [2024-01-05 01:55:52,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_read_SICER.out1 [2024-01-05 01:55:52,225] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_read_SICER.out1 [2024-01-05 01:55:52,232] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_read_SICER.out1 [2024-01-05 01:55:52,293] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_read_SICER.out1 [2024-01-05 01:55:52,333] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-1-removed.bed [2024-01-05 01:55:52,334] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:52,341] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:52,345] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:52,362] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:55:52,362] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:55:52,362] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:52,363] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:55:52,363] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:55:52,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:55:52,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:52,401] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:52,401] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:52,413] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:52,413] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:52,481] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:52,545] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_read_MACS2_peaks.out1 [2024-01-05 01:55:52,549] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_read_MACS2_peaks.out1 [2024-01-05 01:55:52,550] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_read_MACS2_peaks.out1 [2024-01-05 01:55:52,555] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_read_MACS2_peaks.out1 [2024-01-05 01:55:52,555] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_read_MACS2_peaks.out1 [2024-01-05 01:55:52,636] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_read_MACS2_peaks.out1 [2024-01-05 01:55:52,641] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:55:52,669] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:52,673] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:52,674] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:52,680] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:52,680] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:52,750] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:52,759] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:52,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:52,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:52,767] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:52,775] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:52,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_summits.bed [2024-01-05 01:55:52,892] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:52,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:52,897] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:52,902] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:52,903] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:52,975] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:52,984] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:52,986] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:52,987] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:52,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:53,001] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:53,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:55:53,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:53,010] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:53,015] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:53,036] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:55:53,036] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:53,036] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:55:53,036] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:55:53,041] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,044] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,044] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,055] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,055] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,055] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,056] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,056] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,056] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,056] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,056] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,056] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,064] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_RiPPM_norm.bw [2024-01-05 01:55:53,066] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_hist.pdf [2024-01-05 01:55:53,071] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_metrics [2024-01-05 01:55:53,074] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_metrics [2024-01-05 01:55:53,098] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:55:53,101] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:55:53,101] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_alignments.bam.bai [2024-01-05 01:55:53,101] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_sorted_mapped.bam [2024-01-05 01:55:53,102] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_alignments.bam [2024-01-05 01:55:53,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_sorted_mapped.bam.bai [2024-01-05 01:55:53,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26-W400.graph [2024-01-05 01:55:53,166] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26-W400.graph [2024-01-05 01:55:53,167] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26-W400.graph [2024-01-05 01:55:53,174] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26-W400.graph [2024-01-05 01:55:53,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26-W400.graph [2024-01-05 01:55:53,374] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26-W400.graph [2024-01-05 01:55:53,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-1-removed.bed [2024-01-05 01:55:53,490] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26-W400-normalized.wig [2024-01-05 01:55:53,494] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26-W400-normalized.wig [2024-01-05 01:55:53,495] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26-W400-normalized.wig [2024-01-05 01:55:53,504] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26-W400-normalized.wig [2024-01-05 01:55:53,706] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26-W400-normalized.wig [2024-01-05 01:55:53,718] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:53,720] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:53,721] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:53,725] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:53,732] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:53,736] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:55:53,757] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:53,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:53,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:53,769] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:53,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:53,964] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_read_SICER.out1 [2024-01-05 01:55:53,968] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_read_SICER.out1 [2024-01-05 01:55:53,968] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_read_SICER.out1 [2024-01-05 01:55:53,975] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_read_SICER.out1 [2024-01-05 01:55:54,037] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_read_SICER.out1 [2024-01-05 01:55:54,048] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland [2024-01-05 01:55:54,051] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland [2024-01-05 01:55:54,052] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland [2024-01-05 01:55:54,058] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland [2024-01-05 01:55:54,105] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26-W400-G2400-E100.scoreisland [2024-01-05 01:55:54,109] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:54,110] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:55:54,110] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:55:54,116] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:54,119] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:54,140] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:55:54,140] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:54,140] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:55:54,146] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:55:54,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:55:54,150] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:55:54,155] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:55:54,156] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:55:54,256] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:55:54,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_filtered_StrgtPks.bam [2024-01-05 01:55:54,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_StrgtPks_tab.bed [2024-01-05 01:55:54,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:55:54,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_filtered_StrgtPks_sorted.bam [2024-01-05 01:55:54,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_StrgtPksRm_tab.bed [2024-01-05 01:55:54,262] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_filtered_StrgtPks.bam.bai [2024-01-05 01:55:54,267] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,269] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,270] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,274] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,274] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,274] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,274] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,275] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,275] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,275] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,275] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,275] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,281] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_RiPPM_norm.bw [2024-01-05 01:55:54,283] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_hist.pdf [2024-01-05 01:55:54,289] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_metrics [2024-01-05 01:55:54,293] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_metrics [2024-01-05 01:55:54,329] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:55:54,402] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:54,404] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:54,405] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:54,409] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:54,416] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:54,454] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:54,459] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:54,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:54,466] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:54,467] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:54,528] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:54,567] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_read_MACS2_peaks.out1 [2024-01-05 01:55:54,571] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_read_MACS2_peaks.out1 [2024-01-05 01:55:54,571] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_read_MACS2_peaks.out1 [2024-01-05 01:55:54,578] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_read_MACS2_peaks.out1 [2024-01-05 01:55:54,578] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_read_MACS2_peaks.out1 [2024-01-05 01:55:54,640] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_read_MACS2_peaks.out1 [2024-01-05 01:55:54,651] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:54,653] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:54,654] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:54,666] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:54,674] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:54,675] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_summits.bed [2024-01-05 01:55:54,677] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:55:54,698] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:54,702] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:54,703] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:54,710] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:54,710] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:54,779] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:54,828] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:54,833] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:54,834] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:54,841] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:54,841] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:54,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:54,929] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:54,930] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:55:54,930] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:55:54,939] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:54,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:54,960] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:55:54,961] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:54,961] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:55:54,964] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:55:54,966] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:55:54,967] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_alignments.bam.bai [2024-01-05 01:55:54,973] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_alignments.bam [2024-01-05 01:55:54,973] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_sorted_mapped.bam [2024-01-05 01:55:55,008] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_sorted_mapped.bam.bai [2024-01-05 01:55:55,014] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:55:55,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:55:55,017] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:55:55,022] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:55:55,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:55:55,203] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:55:55,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_filtered_StrgtPks.bam.bai [2024-01-05 01:55:55,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_filtered_StrgtPks.bam [2024-01-05 01:55:55,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:55:55,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_StrgtPks_tab.bed [2024-01-05 01:55:55,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_StrgtPksRm_tab.bed [2024-01-05 01:55:55,210] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_filtered_StrgtPks_sorted.bam [2024-01-05 01:55:55,220] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland [2024-01-05 01:55:55,224] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland [2024-01-05 01:55:55,224] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland [2024-01-05 01:55:55,232] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland [2024-01-05 01:55:55,282] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland [2024-01-05 01:55:55,295] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_read_SICER.out1 [2024-01-05 01:55:55,298] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_read_SICER.out1 [2024-01-05 01:55:55,299] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_read_SICER.out1 [2024-01-05 01:55:55,310] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_read_SICER.out1 [2024-01-05 01:55:55,368] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_read_SICER.out1 [2024-01-05 01:55:55,390] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:55,395] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:55,395] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:55,402] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:55,613] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:55,690] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:55:55,692] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-1-removed.bed [2024-01-05 01:55:55,703] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:55,707] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:55,707] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:55,713] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:55,721] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:55,761] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15-W400.graph [2024-01-05 01:55:55,765] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15-W400.graph [2024-01-05 01:55:55,765] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15-W400.graph [2024-01-05 01:55:55,772] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15-W400.graph [2024-01-05 01:55:55,772] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15-W400.graph [2024-01-05 01:55:55,907] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15-W400.graph [2024-01-05 01:55:56,010] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15-W400-normalized.wig [2024-01-05 01:55:56,014] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15-W400-normalized.wig [2024-01-05 01:55:56,015] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15-W400-normalized.wig [2024-01-05 01:55:56,021] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15-W400-normalized.wig [2024-01-05 01:55:56,158] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15-W400-normalized.wig [2024-01-05 01:55:56,170] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:55:56,170] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:55:56,171] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:56,176] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:56,179] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:56,193] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:55:56,193] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:56,194] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:55:56,199] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,203] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,204] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,212] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,212] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,213] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,213] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,213] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,213] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,213] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,213] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,214] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,222] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_RiPPM_norm.bw [2024-01-05 01:55:56,229] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_metrics [2024-01-05 01:55:56,232] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_metrics [2024-01-05 01:55:56,251] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_hist.pdf [2024-01-05 01:55:56,297] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_summits.bed [2024-01-05 01:55:56,332] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:56,337] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:56,337] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:56,342] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:56,343] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:56,413] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:56,423] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:56,426] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:56,426] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:56,431] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:56,441] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:56,448] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:56,451] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:56,451] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:56,456] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:56,465] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:56,467] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:55:56,496] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:56,500] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:56,501] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:56,507] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:56,507] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:56,572] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:56,576] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:55:56,583] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_read_MACS2_peaks.out1 [2024-01-05 01:55:56,587] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_read_MACS2_peaks.out1 [2024-01-05 01:55:56,587] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_read_MACS2_peaks.out1 [2024-01-05 01:55:56,597] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_read_MACS2_peaks.out1 [2024-01-05 01:55:56,598] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_read_MACS2_peaks.out1 [2024-01-05 01:55:56,660] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_read_MACS2_peaks.out1 [2024-01-05 01:55:56,682] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:56,687] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:56,687] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:56,694] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:56,694] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:56,766] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:56,794] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:55:56,794] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:56,809] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:56,812] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:56,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:56,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:55:56,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:55:56,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:55:56,875] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2024-01-05 01:55:56,914] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2024-01-05 01:55:56,917] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2024-01-05 01:55:56,971] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2024-01-05 01:55:56,995] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.txt [2024-01-05 01:55:57,026] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2024-01-05 01:55:57,031] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2024-01-05 01:55:57,032] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2024-01-05 01:55:57,038] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2024-01-05 01:55:57,038] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2024-01-05 01:55:57,048] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: DNAChIPseq_pipeline.docx [2024-01-05 01:55:57,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: DNAChIPseq_pipeline.pdf [2024-01-05 01:55:57,052] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:55:57,055] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:55:57,055] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_alignments.bam.bai [2024-01-05 01:55:57,056] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_sorted_mapped.bam.bai [2024-01-05 01:55:57,056] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_sorted_mapped.bam [2024-01-05 01:55:57,064] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_alignments.bam [2024-01-05 01:55:57,098] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:55:57,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:55:57,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:55:57,107] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:55:57,107] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:55:57,196] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:55:57,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:55:57,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_filtered_StrgtPks.bam.bai [2024-01-05 01:55:57,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_filtered_StrgtPks.bam [2024-01-05 01:55:57,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_StrgtPks_tab.bed [2024-01-05 01:55:57,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_filtered_StrgtPks_sorted.bam [2024-01-05 01:55:57,201] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_StrgtPksRm_tab.bed [2024-01-05 01:55:57,202] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-1-removed.bed [2024-01-05 01:55:57,203] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:55:57,282] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:57,318] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:57,321] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:57,346] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:57,492] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:57,558] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45-W400.graph [2024-01-05 01:55:57,563] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45-W400.graph [2024-01-05 01:55:57,563] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45-W400.graph [2024-01-05 01:55:57,570] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45-W400.graph [2024-01-05 01:55:57,570] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45-W400.graph [2024-01-05 01:55:57,718] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45-W400.graph [2024-01-05 01:55:57,731] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:57,734] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:57,734] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:57,738] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:57,747] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:57,786] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_read_SICER.out1 [2024-01-05 01:55:57,788] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_read_SICER.out1 [2024-01-05 01:55:57,788] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_read_SICER.out1 [2024-01-05 01:55:57,793] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_read_SICER.out1 [2024-01-05 01:55:57,846] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_read_SICER.out1 [2024-01-05 01:55:57,882] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45-W400-normalized.wig [2024-01-05 01:55:57,887] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45-W400-normalized.wig [2024-01-05 01:55:57,888] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45-W400-normalized.wig [2024-01-05 01:55:57,895] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45-W400-normalized.wig [2024-01-05 01:55:58,037] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45-W400-normalized.wig [2024-01-05 01:55:58,051] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland [2024-01-05 01:55:58,054] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland [2024-01-05 01:55:58,054] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland [2024-01-05 01:55:58,061] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland [2024-01-05 01:55:58,118] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45-W400-G2400-E100.scoreisland [2024-01-05 01:55:58,121] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:58,126] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:58,128] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:58,144] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:55:58,144] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:55:58,144] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:58,144] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:55:58,144] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:55:58,149] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,152] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,153] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,156] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,157] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,163] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_RiPPM_norm.bw [2024-01-05 01:55:58,169] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_metrics [2024-01-05 01:55:58,172] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_metrics [2024-01-05 01:55:58,202] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_hist.pdf [2024-01-05 01:55:58,242] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:55:58,253] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:58,256] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:58,257] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:58,262] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:58,272] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:55:58,319] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:58,323] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:58,324] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:58,330] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:58,330] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:58,404] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:55:58,417] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_read_MACS2_peaks.out1 [2024-01-05 01:55:58,422] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_read_MACS2_peaks.out1 [2024-01-05 01:55:58,423] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_read_MACS2_peaks.out1 [2024-01-05 01:55:58,431] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_read_MACS2_peaks.out1 [2024-01-05 01:55:58,431] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_read_MACS2_peaks.out1 [2024-01-05 01:55:58,498] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_read_MACS2_peaks.out1 [2024-01-05 01:55:58,514] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:58,517] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:58,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:58,523] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:58,530] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:55:58,566] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_summits.bed [2024-01-05 01:55:58,626] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:58,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:58,631] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:58,638] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:58,638] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:58,792] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.gappedPeak [2024-01-05 01:55:58,832] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:58,837] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:58,838] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:58,846] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:58,846] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:58,913] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_broad_MACS2_peaks.broadPeak [2024-01-05 01:55:58,918] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:55:58,938] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:55:58,939] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:55:58,949] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:58,954] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:55:58,970] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:55:58,970] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:55:58,970] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:55:58,970] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:55:58,973] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:55:58,976] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:55:58,980] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_alignments.bam [2024-01-05 01:55:59,005] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_sorted_mapped.bam.bai [2024-01-05 01:55:59,005] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_alignments.bam.bai [2024-01-05 01:55:59,005] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_sorted_mapped.bam [2024-01-05 01:55:59,010] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:55:59,012] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:55:59,013] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:55:59,018] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:55:59,019] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:55:59,183] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:55:59,190] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-1-removed.bed [2024-01-05 01:55:59,228] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:59,230] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:59,231] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:59,235] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:59,242] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland.bb [2024-01-05 01:55:59,249] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland [2024-01-05 01:55:59,251] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland [2024-01-05 01:55:59,252] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland [2024-01-05 01:55:59,262] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland [2024-01-05 01:55:59,309] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100.scoreisland [2024-01-05 01:55:59,321] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_read_SICER.out1 [2024-01-05 01:55:59,324] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_read_SICER.out1 [2024-01-05 01:55:59,325] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_read_SICER.out1 [2024-01-05 01:55:59,332] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_read_SICER.out1 [2024-01-05 01:55:59,393] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_read_SICER.out1 [2024-01-05 01:55:59,423] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34-W400.graph [2024-01-05 01:55:59,428] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34-W400.graph [2024-01-05 01:55:59,428] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34-W400.graph [2024-01-05 01:55:59,435] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34-W400.graph [2024-01-05 01:55:59,435] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34-W400.graph [2024-01-05 01:55:59,575] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34-W400.graph [2024-01-05 01:55:59,619] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34-W400-normalized.wig [2024-01-05 01:55:59,624] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34-W400-normalized.wig [2024-01-05 01:55:59,624] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34-W400-normalized.wig [2024-01-05 01:55:59,630] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34-W400-normalized.wig [2024-01-05 01:55:59,774] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34-W400-normalized.wig [2024-01-05 01:55:59,845] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:59,850] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:59,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:59,859] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:55:59,992] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:00,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:00,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:00,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:00,006] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:00,009] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:00,032] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:00,032] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:00,033] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:00,033] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:00,033] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_filtered_StrgtPks.bam [2024-01-05 01:56:00,034] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_filtered_StrgtPks.bam.bai [2024-01-05 01:56:00,034] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_StrgtPksRm_tab.bed [2024-01-05 01:56:00,034] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_StrgtPks_tab.bed [2024-01-05 01:56:00,034] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:00,035] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:00,067] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:00,071] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:00,072] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:00,078] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:00,078] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:00,147] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:00,159] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:00,161] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:00,162] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:00,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:00,173] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:00,186] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_read_MACS2_peaks.out1 [2024-01-05 01:56:00,189] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_read_MACS2_peaks.out1 [2024-01-05 01:56:00,190] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_read_MACS2_peaks.out1 [2024-01-05 01:56:00,196] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_read_MACS2_peaks.out1 [2024-01-05 01:56:00,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_read_MACS2_peaks.out1 [2024-01-05 01:56:00,273] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_read_MACS2_peaks.out1 [2024-01-05 01:56:00,312] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:00,315] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:00,316] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:00,322] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:00,330] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:00,332] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:00,405] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:00,410] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:00,410] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:00,416] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:00,417] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:00,486] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:00,490] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_summits.bed [2024-01-05 01:56:00,496] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:00,523] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:00,527] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:00,527] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:00,535] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:00,535] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:00,606] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:00,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:00,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:00,663] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:00,708] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:00,782] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:00,782] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:00,782] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:00,782] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:00,789] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,792] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,792] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,797] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,797] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,798] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,806] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_RiPPM_norm.bw [2024-01-05 01:56:00,812] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_metrics [2024-01-05 01:56:00,816] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_metrics [2024-01-05 01:56:00,833] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_hist.pdf [2024-01-05 01:56:00,836] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:00,839] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:00,839] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_sorted_mapped.bam.bai [2024-01-05 01:56:00,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_alignments.bam.bai [2024-01-05 01:56:00,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_alignments.bam [2024-01-05 01:56:00,865] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_sorted_mapped.bam [2024-01-05 01:56:00,879] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:56:00,883] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:56:00,883] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:56:00,889] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:56:00,890] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:56:00,992] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:56:00,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-1-removed.bed [2024-01-05 01:56:01,107] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:01,143] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:01,147] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:01,183] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:01,326] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:01,360] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23-W400.graph [2024-01-05 01:56:01,363] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23-W400.graph [2024-01-05 01:56:01,364] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23-W400.graph [2024-01-05 01:56:01,371] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23-W400.graph [2024-01-05 01:56:01,371] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23-W400.graph [2024-01-05 01:56:01,507] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23-W400.graph [2024-01-05 01:56:01,527] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:01,529] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:01,530] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:01,536] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:01,546] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:01,574] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23-W400-normalized.wig [2024-01-05 01:56:01,578] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23-W400-normalized.wig [2024-01-05 01:56:01,579] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23-W400-normalized.wig [2024-01-05 01:56:01,586] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23-W400-normalized.wig [2024-01-05 01:56:01,718] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23-W400-normalized.wig [2024-01-05 01:56:01,728] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:01,742] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland [2024-01-05 01:56:01,744] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland [2024-01-05 01:56:01,744] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland [2024-01-05 01:56:01,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland [2024-01-05 01:56:01,796] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23-W400-G2400-E100.scoreisland [2024-01-05 01:56:01,805] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_read_SICER.out1 [2024-01-05 01:56:01,808] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_read_SICER.out1 [2024-01-05 01:56:01,808] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_read_SICER.out1 [2024-01-05 01:56:01,814] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_read_SICER.out1 [2024-01-05 01:56:01,880] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_read_SICER.out1 [2024-01-05 01:56:01,909] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:01,909] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:01,914] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:01,917] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:01,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:01,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:01,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:01,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:01,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_filtered_StrgtPks.bam.bai [2024-01-05 01:56:01,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_StrgtPksRm_tab.bed [2024-01-05 01:56:01,936] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_StrgtPks_tab.bed [2024-01-05 01:56:01,936] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:01,936] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_filtered_StrgtPks.bam [2024-01-05 01:56:01,936] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:01,943] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,946] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,946] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,956] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,956] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,956] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,957] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,957] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,957] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,957] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,957] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,957] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,962] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_RiPPM_norm.bw [2024-01-05 01:56:01,970] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_metrics [2024-01-05 01:56:01,974] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_metrics [2024-01-05 01:56:01,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_hist.pdf [2024-01-05 01:56:02,067] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:02,071] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:02,072] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:02,079] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:02,079] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:02,145] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:02,154] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:02,156] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:02,157] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:02,161] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:02,174] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:02,202] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:02,207] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:02,207] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:02,213] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:02,214] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:02,289] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:02,317] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_summits.bed [2024-01-05 01:56:02,328] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:02,332] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:02,333] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:02,338] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:02,346] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:02,389] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:02,393] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:02,394] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:02,400] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:02,401] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:02,466] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:02,529] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:02,530] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:02,566] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_read_MACS2_peaks.out1 [2024-01-05 01:56:02,570] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_read_MACS2_peaks.out1 [2024-01-05 01:56:02,570] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_read_MACS2_peaks.out1 [2024-01-05 01:56:02,611] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_read_MACS2_peaks.out1 [2024-01-05 01:56:02,613] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_read_MACS2_peaks.out1 [2024-01-05 01:56:02,749] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_read_MACS2_peaks.out1 [2024-01-05 01:56:02,752] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:02,752] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:02,753] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:02,753] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:02,759] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:02,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:02,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:02,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:02,780] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:02,783] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:02,783] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_sorted_mapped.bam.bai [2024-01-05 01:56:02,784] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_sorted_mapped.bam [2024-01-05 01:56:02,784] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_alignments.bam [2024-01-05 01:56:02,784] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_alignments.bam.bai [2024-01-05 01:56:02,818] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:56:02,821] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:56:02,822] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:56:02,827] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:56:02,827] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:56:02,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:56:02,920] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_filtered_StrgtPks.bam.bai [2024-01-05 01:56:02,920] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_filtered_StrgtPks.bam [2024-01-05 01:56:02,920] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_StrgtPksRm_tab.bed [2024-01-05 01:56:02,920] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:02,920] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:02,921] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_StrgtPks_tab.bed [2024-01-05 01:56:02,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland [2024-01-05 01:56:02,932] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland [2024-01-05 01:56:02,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland [2024-01-05 01:56:02,938] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland [2024-01-05 01:56:03,052] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland [2024-01-05 01:56:03,073] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-1-removed.bed [2024-01-05 01:56:03,105] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:03,109] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:03,110] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:03,117] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:03,254] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:03,280] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12-W400.graph [2024-01-05 01:56:03,283] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12-W400.graph [2024-01-05 01:56:03,284] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12-W400.graph [2024-01-05 01:56:03,290] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12-W400.graph [2024-01-05 01:56:03,291] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12-W400.graph [2024-01-05 01:56:03,435] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12-W400.graph [2024-01-05 01:56:03,451] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_read_SICER.out1 [2024-01-05 01:56:03,459] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_read_SICER.out1 [2024-01-05 01:56:03,459] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_read_SICER.out1 [2024-01-05 01:56:03,465] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_read_SICER.out1 [2024-01-05 01:56:03,518] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_read_SICER.out1 [2024-01-05 01:56:03,609] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12-W400-normalized.wig [2024-01-05 01:56:03,614] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12-W400-normalized.wig [2024-01-05 01:56:03,614] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12-W400-normalized.wig [2024-01-05 01:56:03,621] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12-W400-normalized.wig [2024-01-05 01:56:03,759] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12-W400-normalized.wig [2024-01-05 01:56:03,768] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:03,774] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:03,782] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:03,782] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:03,786] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:03,794] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:03,795] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:03,795] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:03,802] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:03,806] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:03,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:03,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:03,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:03,822] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:03,828] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,831] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,832] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,837] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,844] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_RiPPM_norm.bw [2024-01-05 01:56:03,846] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_hist.pdf [2024-01-05 01:56:03,853] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_metrics [2024-01-05 01:56:03,856] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_metrics [2024-01-05 01:56:03,877] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:03,888] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:03,890] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:03,891] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:03,895] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:03,902] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:03,924] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:03,928] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:03,929] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:03,935] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:03,935] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:04,006] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:04,054] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:04,058] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:04,059] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:04,064] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:04,065] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:04,132] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:04,172] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_read_MACS2_peaks.out1 [2024-01-05 01:56:04,174] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_read_MACS2_peaks.out1 [2024-01-05 01:56:04,175] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_read_MACS2_peaks.out1 [2024-01-05 01:56:04,181] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_read_MACS2_peaks.out1 [2024-01-05 01:56:04,181] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_read_MACS2_peaks.out1 [2024-01-05 01:56:04,258] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_read_MACS2_peaks.out1 [2024-01-05 01:56:04,306] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:04,316] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:04,316] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:04,325] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:04,325] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:04,409] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:04,413] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_summits.bed [2024-01-05 01:56:04,419] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:04,426] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,429] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,431] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,501] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,563] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,564] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:04,565] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:04,565] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:04,573] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:04,578] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:04,597] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:04,597] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:04,597] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:04,600] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:04,603] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:04,603] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_alignments.bam.bai [2024-01-05 01:56:04,607] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_sorted_mapped.bam [2024-01-05 01:56:04,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_fragments.bed [2024-01-05 01:56:04,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_alignments.bam [2024-01-05 01:56:04,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_sorted_mapped.bam.bai [2024-01-05 01:56:04,646] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:56:04,648] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:56:04,648] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:56:04,653] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:56:04,654] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:56:04,747] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:56:04,760] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,763] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,763] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,769] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,777] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:04,784] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:04,787] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:04,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:04,792] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:04,799] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:04,802] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:04,866] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_read_MACS2_peaks.out1 [2024-01-05 01:56:04,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_read_MACS2_peaks.out1 [2024-01-05 01:56:04,904] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_read_MACS2_peaks.out1 [2024-01-05 01:56:04,937] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_read_MACS2_peaks.out1 [2024-01-05 01:56:04,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_read_MACS2_peaks.out1 [2024-01-05 01:56:05,017] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_read_MACS2_peaks.out1 [2024-01-05 01:56:05,066] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:05,071] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:05,071] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:05,078] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:05,079] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:05,140] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:05,164] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_summits.bed [2024-01-05 01:56:05,193] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:05,198] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:05,199] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:05,205] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:05,205] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:05,273] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:05,323] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:05,329] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:05,329] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:05,336] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:05,336] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:05,407] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:05,412] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:05,412] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:05,413] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:05,413] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:05,420] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:05,424] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:05,440] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:05,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:05,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:05,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_filtered_StrgtPks.bam [2024-01-05 01:56:05,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_StrgtPks_tab.bed [2024-01-05 01:56:05,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_StrgtPksRm_tab.bed [2024-01-05 01:56:05,442] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:05,442] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:05,442] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_filtered_StrgtPks.bam.bai [2024-01-05 01:56:05,450] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,454] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,454] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,460] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,469] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_RiPPM_norm.bw [2024-01-05 01:56:05,475] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:05,478] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:05,478] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:05,488] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:05,495] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:05,496] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-1-removed.bed [2024-01-05 01:56:05,535] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_read_SICER.out1 [2024-01-05 01:56:05,537] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_read_SICER.out1 [2024-01-05 01:56:05,538] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_read_SICER.out1 [2024-01-05 01:56:05,543] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_read_SICER.out1 [2024-01-05 01:56:05,606] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_read_SICER.out1 [2024-01-05 01:56:05,665] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2-W400-normalized.wig [2024-01-05 01:56:05,669] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2-W400-normalized.wig [2024-01-05 01:56:05,670] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2-W400-normalized.wig [2024-01-05 01:56:05,677] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2-W400-normalized.wig [2024-01-05 01:56:05,821] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2-W400-normalized.wig [2024-01-05 01:56:05,851] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:05,855] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:05,856] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:05,863] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:05,991] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:05,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:06,006] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland [2024-01-05 01:56:06,009] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland [2024-01-05 01:56:06,009] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland [2024-01-05 01:56:06,015] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland [2024-01-05 01:56:06,072] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2-W400-G2400-E100.scoreisland [2024-01-05 01:56:06,104] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2-W400.graph [2024-01-05 01:56:06,109] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2-W400.graph [2024-01-05 01:56:06,109] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2-W400.graph [2024-01-05 01:56:06,116] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2-W400.graph [2024-01-05 01:56:06,116] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2-W400.graph [2024-01-05 01:56:06,253] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2-W400.graph [2024-01-05 01:56:06,260] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:06,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:06,266] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:06,270] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:06,289] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:06,289] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:06,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:06,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:06,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_metrics [2024-01-05 01:56:06,300] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_metrics [2024-01-05 01:56:06,322] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_hist.pdf [2024-01-05 01:56:06,325] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:06,328] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:06,328] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_sorted_mapped.bam.bai [2024-01-05 01:56:06,354] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_alignments.bam [2024-01-05 01:56:06,356] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_sorted_mapped.bam [2024-01-05 01:56:06,478] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_alignments.bam.bai [2024-01-05 01:56:06,484] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:56:06,487] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:56:06,488] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:56:06,493] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:56:06,493] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:56:06,577] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:56:06,582] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:06,628] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19-W400-normalized.wig [2024-01-05 01:56:06,633] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19-W400-normalized.wig [2024-01-05 01:56:06,634] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19-W400-normalized.wig [2024-01-05 01:56:06,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19-W400-normalized.wig [2024-01-05 01:56:06,835] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19-W400-normalized.wig [2024-01-05 01:56:06,850] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_read_SICER.out1 [2024-01-05 01:56:06,853] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_read_SICER.out1 [2024-01-05 01:56:06,854] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_read_SICER.out1 [2024-01-05 01:56:06,859] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_read_SICER.out1 [2024-01-05 01:56:06,920] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_read_SICER.out1 [2024-01-05 01:56:06,966] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-1-removed.bed [2024-01-05 01:56:07,023] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:07,027] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:07,027] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:07,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:07,155] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:07,168] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland [2024-01-05 01:56:07,171] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland [2024-01-05 01:56:07,171] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland [2024-01-05 01:56:07,177] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland [2024-01-05 01:56:07,237] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland [2024-01-05 01:56:07,261] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19-W400.graph [2024-01-05 01:56:07,265] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19-W400.graph [2024-01-05 01:56:07,266] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19-W400.graph [2024-01-05 01:56:07,273] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19-W400.graph [2024-01-05 01:56:07,273] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19-W400.graph [2024-01-05 01:56:07,404] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19-W400.graph [2024-01-05 01:56:07,417] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:07,426] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:07,427] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:07,435] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:07,445] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:07,446] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:07,446] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:07,453] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:07,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:07,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:07,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:07,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:07,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:07,493] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:07,498] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:07,498] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:07,505] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:07,505] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:07,575] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:07,580] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:07,591] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_read_MACS2_peaks.out1 [2024-01-05 01:56:07,594] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_read_MACS2_peaks.out1 [2024-01-05 01:56:07,595] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_read_MACS2_peaks.out1 [2024-01-05 01:56:07,600] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_read_MACS2_peaks.out1 [2024-01-05 01:56:07,600] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_read_MACS2_peaks.out1 [2024-01-05 01:56:07,672] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_read_MACS2_peaks.out1 [2024-01-05 01:56:07,679] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:07,685] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:07,688] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:07,688] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:07,695] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:07,708] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:07,770] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:07,775] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:07,775] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:07,782] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:07,782] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:07,853] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:07,878] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:07,882] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:07,883] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:07,889] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:07,890] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:07,962] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:07,991] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_summits.bed [2024-01-05 01:56:08,002] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:08,006] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:08,006] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:08,011] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:08,020] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:08,021] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:08,021] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:08,028] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:08,031] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:08,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:08,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:08,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:08,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:08,050] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_StrgtPks_tab.bed [2024-01-05 01:56:08,050] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:08,050] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_filtered_StrgtPks.bam [2024-01-05 01:56:08,050] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:08,050] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_StrgtPksRm_tab.bed [2024-01-05 01:56:08,051] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_filtered_StrgtPks.bam.bai [2024-01-05 01:56:08,057] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,066] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,066] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,070] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,077] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_RiPPM_norm.bw [2024-01-05 01:56:08,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_hist.pdf [2024-01-05 01:56:08,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_metrics [2024-01-05 01:56:08,088] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_metrics [2024-01-05 01:56:08,116] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:08,119] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:08,119] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_alignments.bam.bai [2024-01-05 01:56:08,119] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_sorted_mapped.bam.bai [2024-01-05 01:56:08,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_alignments.bam [2024-01-05 01:56:08,145] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_sorted_mapped.bam [2024-01-05 01:56:08,164] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43-W400-normalized.wig [2024-01-05 01:56:08,174] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43-W400-normalized.wig [2024-01-05 01:56:08,178] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43-W400-normalized.wig [2024-01-05 01:56:08,249] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43-W400-normalized.wig [2024-01-05 01:56:08,413] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43-W400-normalized.wig [2024-01-05 01:56:08,460] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:08,465] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:08,465] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:08,472] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:08,671] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:08,734] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:08,738] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:08,739] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:08,744] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:08,752] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:08,776] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43-W400.graph [2024-01-05 01:56:08,780] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43-W400.graph [2024-01-05 01:56:08,781] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43-W400.graph [2024-01-05 01:56:08,786] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43-W400.graph [2024-01-05 01:56:08,787] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43-W400.graph [2024-01-05 01:56:08,933] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43-W400.graph [2024-01-05 01:56:08,944] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:08,951] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland [2024-01-05 01:56:08,953] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland [2024-01-05 01:56:08,954] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland [2024-01-05 01:56:08,958] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland [2024-01-05 01:56:09,009] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43-W400-G2400-E100.scoreisland [2024-01-05 01:56:09,014] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-1-removed.bed [2024-01-05 01:56:09,020] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_read_SICER.out1 [2024-01-05 01:56:09,023] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_read_SICER.out1 [2024-01-05 01:56:09,023] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_read_SICER.out1 [2024-01-05 01:56:09,034] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_read_SICER.out1 [2024-01-05 01:56:09,086] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_read_SICER.out1 [2024-01-05 01:56:09,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:09,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:09,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:09,095] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:09,098] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:09,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:09,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:09,113] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:09,121] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:56:09,126] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:56:09,126] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:56:09,133] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:56:09,134] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:56:09,223] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:56:09,230] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_filtered_StrgtPks.bam [2024-01-05 01:56:09,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_filtered_StrgtPks.bam.bai [2024-01-05 01:56:09,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:09,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:09,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_StrgtPks_tab.bed [2024-01-05 01:56:09,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_StrgtPksRm_tab.bed [2024-01-05 01:56:09,237] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,240] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,241] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,251] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,260] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_RiPPM_norm.bw [2024-01-05 01:56:09,267] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_metrics [2024-01-05 01:56:09,271] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_metrics [2024-01-05 01:56:09,288] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_hist.pdf [2024-01-05 01:56:09,321] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:09,326] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:09,326] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:09,333] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:09,333] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:09,403] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:09,438] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_summits.bed [2024-01-05 01:56:09,468] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:09,472] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:09,473] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:09,479] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:09,479] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:09,546] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:09,555] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:09,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:09,558] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:09,569] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:09,578] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:09,621] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:09,626] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:09,627] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:09,634] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:09,634] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:09,706] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:09,714] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:09,716] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:09,717] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:09,722] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:09,730] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:09,732] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:09,735] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:09,743] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_read_MACS2_peaks.out1 [2024-01-05 01:56:09,745] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_read_MACS2_peaks.out1 [2024-01-05 01:56:09,745] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_read_MACS2_peaks.out1 [2024-01-05 01:56:09,752] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_read_MACS2_peaks.out1 [2024-01-05 01:56:09,752] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_read_MACS2_peaks.out1 [2024-01-05 01:56:09,824] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_read_MACS2_peaks.out1 [2024-01-05 01:56:09,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:09,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:09,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:09,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:09,852] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:09,852] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:09,853] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:09,853] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:09,856] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:09,858] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:09,859] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_sorted_mapped.bam [2024-01-05 01:56:09,861] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_sorted_mapped.bam.bai [2024-01-05 01:56:09,892] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_alignments.bam.bai [2024-01-05 01:56:09,892] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_alignments.bam [2024-01-05 01:56:09,899] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:56:09,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:56:09,902] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:56:09,907] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:56:09,907] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:56:09,994] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:56:09,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_filtered_StrgtPks.bam.bai [2024-01-05 01:56:09,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_StrgtPks_tab.bed [2024-01-05 01:56:09,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:09,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_filtered_StrgtPks.bam [2024-01-05 01:56:09,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:09,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_StrgtPksRm_tab.bed [2024-01-05 01:56:10,059] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:10,103] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:10,107] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:10,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:10,139] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:10,141] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_summits.bed [2024-01-05 01:56:10,178] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_read_MACS2_peaks.out1 [2024-01-05 01:56:10,180] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_read_MACS2_peaks.out1 [2024-01-05 01:56:10,180] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_read_MACS2_peaks.out1 [2024-01-05 01:56:10,185] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_read_MACS2_peaks.out1 [2024-01-05 01:56:10,185] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_read_MACS2_peaks.out1 [2024-01-05 01:56:10,253] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_read_MACS2_peaks.out1 [2024-01-05 01:56:10,263] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:10,265] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:10,266] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:10,271] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:10,279] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:10,280] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:10,303] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:10,307] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:10,313] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:10,320] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:10,320] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:10,447] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:10,476] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:10,534] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:10,538] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:10,539] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:10,546] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:10,547] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:10,615] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:10,656] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:10,660] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:10,660] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:10,667] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:10,668] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:10,740] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:10,745] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:10,745] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:10,750] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:10,754] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:10,772] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:10,772] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:10,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:10,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:10,778] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,780] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,781] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,786] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,786] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,786] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,786] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,787] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,787] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,787] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,787] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,787] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,794] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_RiPPM_norm.bw [2024-01-05 01:56:10,795] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_hist.pdf [2024-01-05 01:56:10,802] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_metrics [2024-01-05 01:56:10,806] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_metrics [2024-01-05 01:56:10,844] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32-W400-normalized.wig [2024-01-05 01:56:10,848] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32-W400-normalized.wig [2024-01-05 01:56:10,848] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32-W400-normalized.wig [2024-01-05 01:56:10,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32-W400-normalized.wig [2024-01-05 01:56:11,004] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32-W400-normalized.wig [2024-01-05 01:56:11,020] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland [2024-01-05 01:56:11,023] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland [2024-01-05 01:56:11,023] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland [2024-01-05 01:56:11,028] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland [2024-01-05 01:56:11,085] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland [2024-01-05 01:56:11,113] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32-W400.graph [2024-01-05 01:56:11,118] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32-W400.graph [2024-01-05 01:56:11,118] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32-W400.graph [2024-01-05 01:56:11,126] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32-W400.graph [2024-01-05 01:56:11,126] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32-W400.graph [2024-01-05 01:56:11,277] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32-W400.graph [2024-01-05 01:56:11,321] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:11,325] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:11,325] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:11,331] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:11,464] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:11,473] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:11,516] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_read_SICER.out1 [2024-01-05 01:56:11,519] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_read_SICER.out1 [2024-01-05 01:56:11,519] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_read_SICER.out1 [2024-01-05 01:56:11,526] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_read_SICER.out1 [2024-01-05 01:56:11,585] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_read_SICER.out1 [2024-01-05 01:56:11,591] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-1-removed.bed [2024-01-05 01:56:11,602] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:11,605] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:11,605] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:11,610] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:11,619] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:11,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:11,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:11,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:11,625] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:11,629] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:11,653] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:11,653] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:11,653] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:11,656] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:11,659] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:11,659] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_alignments.bam [2024-01-05 01:56:11,660] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_sorted_mapped.bam [2024-01-05 01:56:11,690] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_sorted_mapped.bam.bai [2024-01-05 01:56:11,691] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_alignments.bam.bai [2024-01-05 01:56:11,696] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:56:11,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:56:11,705] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:56:11,711] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:56:11,711] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:56:11,796] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:56:11,816] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:11,820] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:11,820] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:11,826] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:11,826] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:11,980] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:11,989] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:11,992] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:11,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:11,998] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:12,007] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:12,015] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_read_MACS2_peaks.out1 [2024-01-05 01:56:12,024] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_read_MACS2_peaks.out1 [2024-01-05 01:56:12,024] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_read_MACS2_peaks.out1 [2024-01-05 01:56:12,030] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_read_MACS2_peaks.out1 [2024-01-05 01:56:12,031] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_read_MACS2_peaks.out1 [2024-01-05 01:56:12,100] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_read_MACS2_peaks.out1 [2024-01-05 01:56:12,109] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:12,142] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:12,162] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:12,165] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:12,166] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:12,173] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:12,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:12,314] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:12,341] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_summits.bed [2024-01-05 01:56:12,349] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:12,352] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:12,352] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:12,358] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:12,367] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:12,386] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:12,389] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:12,389] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:12,396] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:12,397] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:12,468] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:12,473] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:12,474] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:12,474] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:12,479] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:12,482] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:12,501] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:12,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:12,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:12,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_filtered_StrgtPks.bam [2024-01-05 01:56:12,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_StrgtPksRm_tab.bed [2024-01-05 01:56:12,502] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:12,503] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_filtered_StrgtPks.bam.bai [2024-01-05 01:56:12,503] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:12,503] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_StrgtPks_tab.bed [2024-01-05 01:56:12,535] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:12,540] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:12,540] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:12,547] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:12,686] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:12,702] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:12,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:12,705] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:12,710] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:12,719] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:12,729] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland [2024-01-05 01:56:12,731] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland [2024-01-05 01:56:12,731] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland [2024-01-05 01:56:12,736] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland [2024-01-05 01:56:12,796] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21-W400-G2400-E100.scoreisland [2024-01-05 01:56:12,826] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21-W400-normalized.wig [2024-01-05 01:56:12,830] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21-W400-normalized.wig [2024-01-05 01:56:12,831] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21-W400-normalized.wig [2024-01-05 01:56:12,838] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21-W400-normalized.wig [2024-01-05 01:56:12,967] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21-W400-normalized.wig [2024-01-05 01:56:12,975] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-1-removed.bed [2024-01-05 01:56:13,018] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21-W400.graph [2024-01-05 01:56:13,021] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21-W400.graph [2024-01-05 01:56:13,022] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21-W400.graph [2024-01-05 01:56:13,028] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21-W400.graph [2024-01-05 01:56:13,028] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21-W400.graph [2024-01-05 01:56:13,164] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21-W400.graph [2024-01-05 01:56:13,213] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_read_SICER.out1 [2024-01-05 01:56:13,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_read_SICER.out1 [2024-01-05 01:56:13,218] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_read_SICER.out1 [2024-01-05 01:56:13,226] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_read_SICER.out1 [2024-01-05 01:56:13,284] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_read_SICER.out1 [2024-01-05 01:56:13,330] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:13,330] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:13,330] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:13,337] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:13,340] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:13,355] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:13,356] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:13,356] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:13,356] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:13,363] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,365] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,366] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,370] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,370] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,370] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,370] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,371] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,371] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,371] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,377] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_RiPPM_norm.bw [2024-01-05 01:56:13,384] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_metrics [2024-01-05 01:56:13,387] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_metrics [2024-01-05 01:56:13,401] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_hist.pdf [2024-01-05 01:56:13,403] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:13,406] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:13,407] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_alignments.bam [2024-01-05 01:56:13,407] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_sorted_mapped.bam.bai [2024-01-05 01:56:13,407] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_alignments.bam.bai [2024-01-05 01:56:13,440] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_sorted_mapped.bam [2024-01-05 01:56:13,444] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:56:13,447] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:56:13,447] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:56:13,453] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:56:13,453] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:56:13,546] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:56:13,550] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_filtered_StrgtPks.bam.bai [2024-01-05 01:56:13,550] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_StrgtPksRm_tab.bed [2024-01-05 01:56:13,551] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_StrgtPks_tab.bed [2024-01-05 01:56:13,551] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:13,551] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_filtered_StrgtPks.bam [2024-01-05 01:56:13,551] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:13,578] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:13,581] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:13,581] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:13,587] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:13,597] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:13,615] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:13,619] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:13,619] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:13,626] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:13,626] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:13,694] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:13,704] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:13,707] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:13,707] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:13,712] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:13,721] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:13,724] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:13,751] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_read_MACS2_peaks.out1 [2024-01-05 01:56:13,756] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_read_MACS2_peaks.out1 [2024-01-05 01:56:13,757] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_read_MACS2_peaks.out1 [2024-01-05 01:56:13,762] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_read_MACS2_peaks.out1 [2024-01-05 01:56:13,763] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_read_MACS2_peaks.out1 [2024-01-05 01:56:13,922] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_read_MACS2_peaks.out1 [2024-01-05 01:56:13,956] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_summits.bed [2024-01-05 01:56:13,956] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:14,022] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:14,027] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:14,028] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:14,034] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:14,035] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:14,105] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:14,135] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:14,139] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:14,140] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:14,146] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:14,146] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:14,311] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:14,326] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:14,326] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:14,334] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:14,338] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:14,354] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:14,355] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:14,355] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:14,355] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:14,362] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,364] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,364] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,370] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,384] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_RiPPM_norm.bw [2024-01-05 01:56:14,385] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_hist.pdf [2024-01-05 01:56:14,392] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_metrics [2024-01-05 01:56:14,395] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_metrics [2024-01-05 01:56:14,418] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_read_SICER.out1 [2024-01-05 01:56:14,422] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_read_SICER.out1 [2024-01-05 01:56:14,422] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_read_SICER.out1 [2024-01-05 01:56:14,429] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_read_SICER.out1 [2024-01-05 01:56:14,492] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_read_SICER.out1 [2024-01-05 01:56:14,497] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-1-removed.bed [2024-01-05 01:56:14,557] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10-W400-normalized.wig [2024-01-05 01:56:14,562] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10-W400-normalized.wig [2024-01-05 01:56:14,563] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10-W400-normalized.wig [2024-01-05 01:56:14,569] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10-W400-normalized.wig [2024-01-05 01:56:14,690] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10-W400-normalized.wig [2024-01-05 01:56:14,697] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:14,712] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:14,715] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:14,715] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:14,722] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:14,845] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:14,861] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland [2024-01-05 01:56:14,864] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland [2024-01-05 01:56:14,864] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland [2024-01-05 01:56:14,870] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland [2024-01-05 01:56:14,923] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland [2024-01-05 01:56:14,930] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:14,933] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:14,933] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:14,939] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:14,947] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:14,975] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10-W400.graph [2024-01-05 01:56:14,980] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10-W400.graph [2024-01-05 01:56:14,980] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10-W400.graph [2024-01-05 01:56:14,986] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10-W400.graph [2024-01-05 01:56:14,986] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10-W400.graph [2024-01-05 01:56:15,111] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10-W400.graph [2024-01-05 01:56:15,118] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:15,124] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:15,127] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:15,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:15,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:15,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:15,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:15,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:15,150] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:15,152] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:15,153] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_sorted_mapped.bam [2024-01-05 01:56:15,156] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_fragments.bed [2024-01-05 01:56:15,156] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_sorted_mapped.bam.bai [2024-01-05 01:56:15,156] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_alignments.bam [2024-01-05 01:56:15,157] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_alignments.bam.bai [2024-01-05 01:56:15,190] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:15,194] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:15,194] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:15,199] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:15,208] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:15,233] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_summits.bed [2024-01-05 01:56:15,308] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:15,312] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:15,313] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:15,319] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:15,319] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:15,390] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:15,397] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:15,432] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_read_MACS2_peaks.out1 [2024-01-05 01:56:15,435] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_read_MACS2_peaks.out1 [2024-01-05 01:56:15,436] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_read_MACS2_peaks.out1 [2024-01-05 01:56:15,441] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_read_MACS2_peaks.out1 [2024-01-05 01:56:15,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_read_MACS2_peaks.out1 [2024-01-05 01:56:15,515] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_read_MACS2_peaks.out1 [2024-01-05 01:56:15,536] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:15,541] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:15,541] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:15,548] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:15,548] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:15,620] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:15,740] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:15,745] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:15,746] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:15,754] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:15,754] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:15,828] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:15,866] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:15,938] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:15,942] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:15,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:15,950] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:15,960] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:15,961] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:15,961] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:15,961] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:15,966] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:15,970] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:15,989] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:15,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:15,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:16,004] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:56:16,033] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:56:16,037] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:56:16,106] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:56:16,108] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:56:16,201] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:56:16,211] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_StrgtPksRm_tab.bed [2024-01-05 01:56:16,211] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:16,211] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:16,211] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_filtered_StrgtPks.bam.bai [2024-01-05 01:56:16,212] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_filtered_StrgtPks.bam [2024-01-05 01:56:16,212] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_StrgtPks_tab.bed [2024-01-05 01:56:16,218] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,222] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,226] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,227] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,227] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,227] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,227] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,227] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,235] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_RiPPM_norm.bw [2024-01-05 01:56:16,235] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_hist.pdf [2024-01-05 01:56:16,240] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_metrics [2024-01-05 01:56:16,244] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_metrics [2024-01-05 01:56:16,261] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-1-removed.bed [2024-01-05 01:56:16,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_read_SICER.out1 [2024-01-05 01:56:16,316] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_read_SICER.out1 [2024-01-05 01:56:16,317] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_read_SICER.out1 [2024-01-05 01:56:16,323] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_read_SICER.out1 [2024-01-05 01:56:16,373] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_read_SICER.out1 [2024-01-05 01:56:16,472] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland [2024-01-05 01:56:16,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland [2024-01-05 01:56:16,486] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland [2024-01-05 01:56:16,495] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland [2024-01-05 01:56:16,557] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland [2024-01-05 01:56:16,623] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4-W400.graph [2024-01-05 01:56:16,627] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4-W400.graph [2024-01-05 01:56:16,628] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4-W400.graph [2024-01-05 01:56:16,640] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4-W400.graph [2024-01-05 01:56:16,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4-W400.graph [2024-01-05 01:56:16,774] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4-W400.graph [2024-01-05 01:56:16,826] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:16,830] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:16,830] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:16,837] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:16,975] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:17,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:17,023] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4-W400-normalized.wig [2024-01-05 01:56:17,027] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4-W400-normalized.wig [2024-01-05 01:56:17,028] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4-W400-normalized.wig [2024-01-05 01:56:17,034] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4-W400-normalized.wig [2024-01-05 01:56:17,160] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4-W400-normalized.wig [2024-01-05 01:56:17,177] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:17,181] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:17,182] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:17,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:17,198] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:17,200] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:17,200] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:17,200] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:17,207] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:17,210] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:17,224] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:17,224] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:17,224] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:17,224] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_fragments.bed [2024-01-05 01:56:17,225] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_fragments.bed [2024-01-05 01:56:17,225] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9_STARR9_ATAC1789.bed [2024-01-05 01:56:17,225] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_fragments.bed [2024-01-05 01:56:17,225] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9_STARR9_34918_coor.bed [2024-01-05 01:56:17,225] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_fragments.bed [2024-01-05 01:56:17,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:17,234] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:17,234] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_alignments.bam.bai [2024-01-05 01:56:17,235] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_sorted_mapped.bam.bai [2024-01-05 01:56:17,264] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_alignments.bam [2024-01-05 01:56:17,264] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_sorted_mapped.bam [2024-01-05 01:56:17,271] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:56:17,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:56:17,274] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:56:17,284] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:56:17,285] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:56:17,376] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:56:17,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_StrgtPks_tab.bed [2024-01-05 01:56:17,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:17,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_filtered_StrgtPks.bam [2024-01-05 01:56:17,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_StrgtPksRm_tab.bed [2024-01-05 01:56:17,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:17,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_filtered_StrgtPks.bam.bai [2024-01-05 01:56:17,536] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:17,539] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:17,539] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:17,545] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:17,553] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:17,557] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_summits.bed [2024-01-05 01:56:17,560] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:17,568] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_read_MACS2_peaks.out1 [2024-01-05 01:56:17,570] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_read_MACS2_peaks.out1 [2024-01-05 01:56:17,570] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_read_MACS2_peaks.out1 [2024-01-05 01:56:17,575] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_read_MACS2_peaks.out1 [2024-01-05 01:56:17,575] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_read_MACS2_peaks.out1 [2024-01-05 01:56:17,643] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_read_MACS2_peaks.out1 [2024-01-05 01:56:17,648] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:17,713] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:17,717] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:17,718] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:17,726] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:17,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:17,847] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:17,899] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:17,904] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:17,904] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:17,911] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:17,925] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:17,946] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:17,950] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:17,951] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:17,958] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:17,958] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:18,031] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:18,078] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:18,082] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:18,082] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:18,089] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:18,089] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:18,178] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:18,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:18,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:18,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:18,192] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:18,207] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:18,207] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:18,207] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:18,207] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:18,211] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-1-removed.bed [2024-01-05 01:56:18,221] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland [2024-01-05 01:56:18,225] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland [2024-01-05 01:56:18,226] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland [2024-01-05 01:56:18,232] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland [2024-01-05 01:56:18,286] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland [2024-01-05 01:56:18,295] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:18,298] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:18,298] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:18,304] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:18,310] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:18,319] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_read_SICER.out1 [2024-01-05 01:56:18,322] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_read_SICER.out1 [2024-01-05 01:56:18,323] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_read_SICER.out1 [2024-01-05 01:56:18,329] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_read_SICER.out1 [2024-01-05 01:56:18,392] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_read_SICER.out1 [2024-01-05 01:56:18,416] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:18,420] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:18,421] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:18,427] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:18,571] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:18,581] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:18,601] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40-W400.graph [2024-01-05 01:56:18,605] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40-W400.graph [2024-01-05 01:56:18,606] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40-W400.graph [2024-01-05 01:56:18,612] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40-W400.graph [2024-01-05 01:56:18,613] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40-W400.graph [2024-01-05 01:56:18,756] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40-W400.graph [2024-01-05 01:56:18,845] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40-W400-normalized.wig [2024-01-05 01:56:18,850] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40-W400-normalized.wig [2024-01-05 01:56:18,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40-W400-normalized.wig [2024-01-05 01:56:18,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40-W400-normalized.wig [2024-01-05 01:56:18,995] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40-W400-normalized.wig [2024-01-05 01:56:19,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:19,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:19,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:19,008] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:19,012] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:19,029] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:19,029] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:19,029] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:19,035] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,038] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,039] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,043] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,044] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,052] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_RiPPM_norm.bw [2024-01-05 01:56:19,059] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_metrics [2024-01-05 01:56:19,063] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_metrics [2024-01-05 01:56:19,080] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_hist.pdf [2024-01-05 01:56:19,085] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:19,088] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:19,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_sorted_mapped.bam [2024-01-05 01:56:19,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_alignments.bam.bai [2024-01-05 01:56:19,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_alignments.bam [2024-01-05 01:56:19,126] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_sorted_mapped.bam.bai [2024-01-05 01:56:19,132] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:56:19,135] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:56:19,135] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:56:19,142] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:56:19,142] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:56:19,280] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:56:19,301] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_StrgtPks_tab.bed [2024-01-05 01:56:19,303] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:19,304] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_StrgtPksRm_tab.bed [2024-01-05 01:56:19,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_filtered_StrgtPks.bam.bai [2024-01-05 01:56:19,308] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_filtered_StrgtPks.bam [2024-01-05 01:56:19,315] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:19,342] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:19,347] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:19,348] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:19,353] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:19,353] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:19,430] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:19,434] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_summits.bed [2024-01-05 01:56:19,457] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:19,461] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:19,461] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:19,468] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:19,468] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:19,541] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:19,551] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:19,556] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:19,557] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:19,564] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:19,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:19,581] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_read_MACS2_peaks.out1 [2024-01-05 01:56:19,590] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_read_MACS2_peaks.out1 [2024-01-05 01:56:19,596] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_read_MACS2_peaks.out1 [2024-01-05 01:56:19,662] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_read_MACS2_peaks.out1 [2024-01-05 01:56:19,664] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_read_MACS2_peaks.out1 [2024-01-05 01:56:19,763] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_read_MACS2_peaks.out1 [2024-01-05 01:56:19,790] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:19,801] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:19,805] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:19,805] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:19,811] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:19,818] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:19,882] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:19,886] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:19,886] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:19,894] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:19,894] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:19,970] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:19,978] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:19,979] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:19,979] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:19,979] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:19,979] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:19,984] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:19,989] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:20,006] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:20,007] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:20,014] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,016] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,021] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,022] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,029] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_RiPPM_norm.bw [2024-01-05 01:56:20,031] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_hist.pdf [2024-01-05 01:56:20,041] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_metrics [2024-01-05 01:56:20,046] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_metrics [2024-01-05 01:56:20,069] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:20,116] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39-W400-normalized.wig [2024-01-05 01:56:20,121] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39-W400-normalized.wig [2024-01-05 01:56:20,122] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39-W400-normalized.wig [2024-01-05 01:56:20,128] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39-W400-normalized.wig [2024-01-05 01:56:20,264] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39-W400-normalized.wig [2024-01-05 01:56:20,278] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-1-removed.bed [2024-01-05 01:56:20,283] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:20,285] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:20,285] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:20,290] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:20,298] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:20,306] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_read_SICER.out1 [2024-01-05 01:56:20,309] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_read_SICER.out1 [2024-01-05 01:56:20,310] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_read_SICER.out1 [2024-01-05 01:56:20,315] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_read_SICER.out1 [2024-01-05 01:56:20,368] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_read_SICER.out1 [2024-01-05 01:56:20,385] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland [2024-01-05 01:56:20,387] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland [2024-01-05 01:56:20,387] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland [2024-01-05 01:56:20,392] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland [2024-01-05 01:56:20,444] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100.scoreisland [2024-01-05 01:56:20,472] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:20,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:20,477] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:20,483] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:20,627] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:20,686] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39-W400.graph [2024-01-05 01:56:20,690] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39-W400.graph [2024-01-05 01:56:20,691] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39-W400.graph [2024-01-05 01:56:20,696] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39-W400.graph [2024-01-05 01:56:20,697] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39-W400.graph [2024-01-05 01:56:20,842] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39-W400.graph [2024-01-05 01:56:20,850] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:20,850] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:20,850] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:20,856] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:20,859] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:20,877] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:20,877] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:20,878] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:20,883] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:20,886] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:20,886] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_sorted_mapped.bam [2024-01-05 01:56:20,887] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_sorted_mapped.bam.bai [2024-01-05 01:56:20,889] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_alignments.bam [2024-01-05 01:56:20,914] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_alignments.bam.bai [2024-01-05 01:56:20,927] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:56:20,929] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:56:20,929] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:56:20,933] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:56:20,934] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:56:21,037] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:56:21,043] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_filtered_StrgtPks.bam [2024-01-05 01:56:21,043] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:21,044] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_filtered_StrgtPks.bam.bai [2024-01-05 01:56:21,044] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_StrgtPks_tab.bed [2024-01-05 01:56:21,044] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_StrgtPksRm_tab.bed [2024-01-05 01:56:21,044] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:21,122] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:21,138] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:21,141] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:21,142] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:21,147] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:21,155] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:21,164] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:21,167] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:21,168] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:21,173] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:21,182] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:21,207] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:21,212] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:21,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:21,218] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:21,219] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:21,386] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:21,391] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:21,419] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_summits.bed [2024-01-05 01:56:21,431] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_read_MACS2_peaks.out1 [2024-01-05 01:56:21,435] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_read_MACS2_peaks.out1 [2024-01-05 01:56:21,435] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_read_MACS2_peaks.out1 [2024-01-05 01:56:21,441] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_read_MACS2_peaks.out1 [2024-01-05 01:56:21,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_read_MACS2_peaks.out1 [2024-01-05 01:56:21,510] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_read_MACS2_peaks.out1 [2024-01-05 01:56:21,567] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:21,572] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:21,572] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:21,580] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:21,580] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:21,664] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:21,785] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:21,789] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:21,790] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:21,796] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:21,797] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:21,866] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:21,870] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:21,870] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:21,870] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:21,882] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:21,885] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:21,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:21,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:21,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:21,921] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28-W400.graph [2024-01-05 01:56:21,925] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28-W400.graph [2024-01-05 01:56:21,926] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28-W400.graph [2024-01-05 01:56:21,933] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28-W400.graph [2024-01-05 01:56:21,933] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28-W400.graph [2024-01-05 01:56:22,074] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28-W400.graph [2024-01-05 01:56:22,089] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland [2024-01-05 01:56:22,097] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland [2024-01-05 01:56:22,097] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland [2024-01-05 01:56:22,106] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland [2024-01-05 01:56:22,159] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland [2024-01-05 01:56:22,222] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28-W400-normalized.wig [2024-01-05 01:56:22,226] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28-W400-normalized.wig [2024-01-05 01:56:22,227] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28-W400-normalized.wig [2024-01-05 01:56:22,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28-W400-normalized.wig [2024-01-05 01:56:22,370] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28-W400-normalized.wig [2024-01-05 01:56:22,386] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_read_SICER.out1 [2024-01-05 01:56:22,389] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_read_SICER.out1 [2024-01-05 01:56:22,390] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_read_SICER.out1 [2024-01-05 01:56:22,395] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_read_SICER.out1 [2024-01-05 01:56:22,457] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_read_SICER.out1 [2024-01-05 01:56:22,460] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-1-removed.bed [2024-01-05 01:56:22,496] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:22,501] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:22,501] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:22,508] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:22,647] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:22,660] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:22,663] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:22,664] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:22,669] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:22,678] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:22,731] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:22,732] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:22,732] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:22,733] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:22,733] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:22,748] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:22,753] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:22,775] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:22,775] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:22,782] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,785] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,786] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,793] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,793] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,793] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,793] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,794] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,794] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,794] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,794] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,794] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,804] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_RiPPM_norm.bw [2024-01-05 01:56:22,806] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_hist.pdf [2024-01-05 01:56:22,812] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_metrics [2024-01-05 01:56:22,815] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_metrics [2024-01-05 01:56:22,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:22,848] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:22,848] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_alignments.bam.bai [2024-01-05 01:56:22,848] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_sorted_mapped.bam [2024-01-05 01:56:22,848] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_alignments.bam [2024-01-05 01:56:22,849] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_sorted_mapped.bam.bai [2024-01-05 01:56:22,886] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:56:22,889] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:56:22,889] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:56:22,895] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:56:22,895] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:56:22,996] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:56:23,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:23,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_filtered_StrgtPks.bam [2024-01-05 01:56:23,004] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_StrgtPks_tab.bed [2024-01-05 01:56:23,004] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_filtered_StrgtPks.bam.bai [2024-01-05 01:56:23,004] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:23,004] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_StrgtPksRm_tab.bed [2024-01-05 01:56:23,010] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:23,015] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:23,016] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:23,023] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:23,034] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:23,041] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:23,043] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:23,044] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:23,048] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:23,063] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:23,090] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:23,094] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:23,094] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:23,101] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:23,101] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:23,221] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:23,245] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:23,247] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_summits.bed [2024-01-05 01:56:23,299] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:23,304] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:23,304] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:23,312] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:23,312] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:23,386] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:23,443] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:23,447] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:23,447] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:23,455] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:23,455] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:23,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:23,533] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:23,704] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_read_MACS2_peaks.out1 [2024-01-05 01:56:23,709] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_read_MACS2_peaks.out1 [2024-01-05 01:56:23,709] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_read_MACS2_peaks.out1 [2024-01-05 01:56:23,717] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_read_MACS2_peaks.out1 [2024-01-05 01:56:23,717] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_read_MACS2_peaks.out1 [2024-01-05 01:56:23,788] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_read_MACS2_peaks.out1 [2024-01-05 01:56:23,792] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:23,798] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:23,808] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:23,823] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:23,823] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:23,823] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:23,823] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:23,824] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:23,830] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,833] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,834] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,839] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,848] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_RiPPM_norm.bw [2024-01-05 01:56:23,856] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_metrics [2024-01-05 01:56:23,860] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_metrics [2024-01-05 01:56:23,880] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_hist.pdf [2024-01-05 01:56:23,888] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland [2024-01-05 01:56:23,890] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland [2024-01-05 01:56:23,890] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland [2024-01-05 01:56:23,895] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland [2024-01-05 01:56:23,951] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland [2024-01-05 01:56:23,960] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:23,962] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:23,962] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:23,967] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:23,976] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:23,985] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_read_SICER.out1 [2024-01-05 01:56:23,988] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_read_SICER.out1 [2024-01-05 01:56:23,989] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_read_SICER.out1 [2024-01-05 01:56:23,993] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_read_SICER.out1 [2024-01-05 01:56:24,053] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_read_SICER.out1 [2024-01-05 01:56:24,089] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:24,093] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:24,093] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:24,101] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:24,239] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:24,247] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-1-removed.bed [2024-01-05 01:56:24,277] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17-W400-normalized.wig [2024-01-05 01:56:24,281] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17-W400-normalized.wig [2024-01-05 01:56:24,282] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17-W400-normalized.wig [2024-01-05 01:56:24,289] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17-W400-normalized.wig [2024-01-05 01:56:24,429] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17-W400-normalized.wig [2024-01-05 01:56:24,518] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17-W400.graph [2024-01-05 01:56:24,522] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17-W400.graph [2024-01-05 01:56:24,523] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17-W400.graph [2024-01-05 01:56:24,528] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17-W400.graph [2024-01-05 01:56:24,529] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17-W400.graph [2024-01-05 01:56:24,679] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17-W400.graph [2024-01-05 01:56:24,689] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:24,689] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:24,689] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:24,695] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:24,699] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:24,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:24,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:24,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:24,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:24,719] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:24,721] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:24,749] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_alignments.bam.bai [2024-01-05 01:56:24,749] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_alignments.bam [2024-01-05 01:56:24,749] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_sorted_mapped.bam [2024-01-05 01:56:24,749] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_sorted_mapped.bam.bai [2024-01-05 01:56:24,756] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:56:24,758] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:56:24,758] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:56:24,763] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:56:24,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:56:24,862] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:56:24,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_filtered_StrgtPks.bam.bai [2024-01-05 01:56:24,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_filtered_StrgtPks.bam [2024-01-05 01:56:24,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_StrgtPks_tab.bed [2024-01-05 01:56:24,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_StrgtPksRm_tab.bed [2024-01-05 01:56:24,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:24,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:24,927] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7-W400.graph [2024-01-05 01:56:24,932] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7-W400.graph [2024-01-05 01:56:24,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7-W400.graph [2024-01-05 01:56:24,939] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7-W400.graph [2024-01-05 01:56:24,939] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7-W400.graph [2024-01-05 01:56:25,084] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7-W400.graph [2024-01-05 01:56:25,103] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:25,106] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:25,106] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:25,113] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:25,123] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:25,231] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:25,266] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:25,269] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:25,286] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:25,424] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:25,439] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland [2024-01-05 01:56:25,441] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland [2024-01-05 01:56:25,442] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland [2024-01-05 01:56:25,447] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland [2024-01-05 01:56:25,495] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7-W400-G2400-E100.scoreisland [2024-01-05 01:56:25,531] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_read_SICER.out1 [2024-01-05 01:56:25,536] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_read_SICER.out1 [2024-01-05 01:56:25,537] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_read_SICER.out1 [2024-01-05 01:56:25,544] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_read_SICER.out1 [2024-01-05 01:56:25,710] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_read_SICER.out1 [2024-01-05 01:56:25,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:25,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-1-removed.bed [2024-01-05 01:56:25,746] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7-W400-normalized.wig [2024-01-05 01:56:25,751] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7-W400-normalized.wig [2024-01-05 01:56:25,751] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7-W400-normalized.wig [2024-01-05 01:56:25,758] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7-W400-normalized.wig [2024-01-05 01:56:25,903] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7-W400-normalized.wig [2024-01-05 01:56:25,911] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:25,911] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:25,917] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:25,919] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:25,937] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:25,937] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:25,937] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:25,937] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:25,943] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,945] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,946] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,950] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,951] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,951] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,962] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_RiPPM_norm.bw [2024-01-05 01:56:25,963] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_hist.pdf [2024-01-05 01:56:25,968] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_metrics [2024-01-05 01:56:25,972] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_metrics [2024-01-05 01:56:25,991] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:25,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_summits.bed [2024-01-05 01:56:25,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:26,017] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:26,021] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:26,022] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:26,029] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:26,029] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:26,112] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:26,155] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,159] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,160] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,171] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,172] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,237] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,267] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_read_MACS2_peaks.out1 [2024-01-05 01:56:26,270] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_read_MACS2_peaks.out1 [2024-01-05 01:56:26,276] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_read_MACS2_peaks.out1 [2024-01-05 01:56:26,282] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_read_MACS2_peaks.out1 [2024-01-05 01:56:26,282] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_read_MACS2_peaks.out1 [2024-01-05 01:56:26,347] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_read_MACS2_peaks.out1 [2024-01-05 01:56:26,394] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:26,398] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:26,399] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:26,405] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:26,412] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:26,418] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:26,423] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:26,424] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:26,431] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:26,440] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:26,467] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:26,471] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:26,471] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:26,478] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:26,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:26,550] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:26,554] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:26,560] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:26,564] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:26,577] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:26,577] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:26,595] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:26,596] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:26,596] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:26,640] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: process_output_extradetailed.R [2024-01-05 01:56:26,645] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: process_output_extradetailed.R [2024-01-05 01:56:26,645] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: process_output_extradetailed.R [2024-01-05 01:56:26,653] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: process_output_extradetailed.R [2024-01-05 01:56:26,668] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: process_output_extradetailed.R [2024-01-05 01:56:26,676] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: run.sh [2024-01-05 01:56:26,680] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: run.sh [2024-01-05 01:56:26,686] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: run.sh [2024-01-05 01:56:26,707] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: process_output_compact.R [2024-01-05 01:56:26,709] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: process_output_compact.R [2024-01-05 01:56:26,738] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: process_output_detailed.R [2024-01-05 01:56:26,741] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: process_output_detailed.R [2024-01-05 01:56:26,748] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: process_output_detailed.R [2024-01-05 01:56:26,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Undetermined_Undetermined_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:26,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Undetermined_Undetermined_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:26,783] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:26,786] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:26,787] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_alignments.bam.bai [2024-01-05 01:56:26,787] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_sorted_mapped.bam.bai [2024-01-05 01:56:26,787] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_sorted_mapped.bam [2024-01-05 01:56:26,827] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_alignments.bam [2024-01-05 01:56:26,857] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_summits.bed [2024-01-05 01:56:26,890] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,894] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,895] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,901] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:26,902] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:27,056] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:27,088] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:27,092] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:27,093] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:27,100] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:27,100] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:27,171] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:27,179] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:27,182] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:27,182] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:27,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:27,200] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:27,258] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:27,263] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:27,263] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:27,284] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:27,286] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:27,427] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:27,438] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:27,441] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:27,442] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:27,452] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:27,459] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:27,466] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_read_MACS2_peaks.out1 [2024-01-05 01:56:27,469] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_read_MACS2_peaks.out1 [2024-01-05 01:56:27,469] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_read_MACS2_peaks.out1 [2024-01-05 01:56:27,475] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_read_MACS2_peaks.out1 [2024-01-05 01:56:27,475] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_read_MACS2_peaks.out1 [2024-01-05 01:56:27,538] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_read_MACS2_peaks.out1 [2024-01-05 01:56:27,588] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:27,614] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:27,630] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:27,631] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:27,631] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:27,641] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:27,644] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:27,667] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:27,667] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:27,667] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:27,672] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:56:27,675] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:56:27,675] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:56:27,679] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:56:27,680] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:56:27,773] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:56:27,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_StrgtPks_tab.bed [2024-01-05 01:56:27,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_filtered_StrgtPks.bam.bai [2024-01-05 01:56:27,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_filtered_StrgtPks.bam [2024-01-05 01:56:27,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:27,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:27,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_StrgtPksRm_tab.bed [2024-01-05 01:56:27,814] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,818] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,818] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,824] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,832] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_RiPPM_norm.bw [2024-01-05 01:56:27,833] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_hist.pdf [2024-01-05 01:56:27,840] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_metrics [2024-01-05 01:56:27,843] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_metrics [2024-01-05 01:56:27,888] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47-W400.graph [2024-01-05 01:56:27,893] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47-W400.graph [2024-01-05 01:56:27,893] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47-W400.graph [2024-01-05 01:56:27,899] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47-W400.graph [2024-01-05 01:56:27,899] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47-W400.graph [2024-01-05 01:56:28,041] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47-W400.graph [2024-01-05 01:56:28,056] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:28,065] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:28,068] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:28,069] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:28,075] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:28,083] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:28,096] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland [2024-01-05 01:56:28,099] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland [2024-01-05 01:56:28,099] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland [2024-01-05 01:56:28,104] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland [2024-01-05 01:56:28,159] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100.scoreisland [2024-01-05 01:56:28,166] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-1-removed.bed [2024-01-05 01:56:28,215] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_read_SICER.out1 [2024-01-05 01:56:28,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_read_SICER.out1 [2024-01-05 01:56:28,218] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_read_SICER.out1 [2024-01-05 01:56:28,224] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_read_SICER.out1 [2024-01-05 01:56:28,280] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_read_SICER.out1 [2024-01-05 01:56:28,310] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47-W400-normalized.wig [2024-01-05 01:56:28,315] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47-W400-normalized.wig [2024-01-05 01:56:28,316] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47-W400-normalized.wig [2024-01-05 01:56:28,322] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47-W400-normalized.wig [2024-01-05 01:56:28,467] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47-W400-normalized.wig [2024-01-05 01:56:28,522] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:28,527] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:28,528] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:28,534] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:28,663] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:28,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:28,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:28,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:28,671] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:28,676] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:28,680] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:28,698] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:28,698] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:28,703] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:28,706] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:28,711] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_alignments.bam.bai [2024-01-05 01:56:28,711] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_sorted_mapped.bam.bai [2024-01-05 01:56:28,712] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_sorted_mapped.bam [2024-01-05 01:56:28,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_alignments.bam [2024-01-05 01:56:28,749] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:56:28,751] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:56:28,752] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:56:28,757] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:56:28,758] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:56:28,921] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:56:28,925] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_filtered_StrgtPks.bam.bai [2024-01-05 01:56:28,925] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:28,925] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_filtered_StrgtPks.bam [2024-01-05 01:56:28,926] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_StrgtPks_tab.bed [2024-01-05 01:56:28,926] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_StrgtPksRm_tab.bed [2024-01-05 01:56:28,926] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:28,932] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,935] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,935] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,941] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,942] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,956] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_RiPPM_norm.bw [2024-01-05 01:56:28,958] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_hist.pdf [2024-01-05 01:56:28,966] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_metrics [2024-01-05 01:56:28,969] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_metrics [2024-01-05 01:56:29,004] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36-W400-normalized.wig [2024-01-05 01:56:29,007] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36-W400-normalized.wig [2024-01-05 01:56:29,008] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36-W400-normalized.wig [2024-01-05 01:56:29,015] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36-W400-normalized.wig [2024-01-05 01:56:29,139] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36-W400-normalized.wig [2024-01-05 01:56:29,217] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:29,254] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:29,257] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:29,278] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:29,288] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:29,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_read_SICER.out1 [2024-01-05 01:56:29,299] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_read_SICER.out1 [2024-01-05 01:56:29,299] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_read_SICER.out1 [2024-01-05 01:56:29,303] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_read_SICER.out1 [2024-01-05 01:56:29,367] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_read_SICER.out1 [2024-01-05 01:56:29,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36-W400.graph [2024-01-05 01:56:29,406] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36-W400.graph [2024-01-05 01:56:29,407] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36-W400.graph [2024-01-05 01:56:29,413] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36-W400.graph [2024-01-05 01:56:29,413] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36-W400.graph [2024-01-05 01:56:29,560] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36-W400.graph [2024-01-05 01:56:29,576] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland [2024-01-05 01:56:29,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland [2024-01-05 01:56:29,579] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland [2024-01-05 01:56:29,584] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland [2024-01-05 01:56:29,644] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100.scoreisland [2024-01-05 01:56:29,648] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-1-removed.bed [2024-01-05 01:56:29,675] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:29,680] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:29,681] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:29,687] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:29,829] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:29,866] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:29,867] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:29,867] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:29,867] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:29,873] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:29,876] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:29,890] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:29,890] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:29,891] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:29,926] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:29,938] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_read_MACS2_peaks.out1 [2024-01-05 01:56:29,942] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_read_MACS2_peaks.out1 [2024-01-05 01:56:29,942] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_read_MACS2_peaks.out1 [2024-01-05 01:56:29,948] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_read_MACS2_peaks.out1 [2024-01-05 01:56:29,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_read_MACS2_peaks.out1 [2024-01-05 01:56:30,021] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_read_MACS2_peaks.out1 [2024-01-05 01:56:30,026] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_summits.bed [2024-01-05 01:56:30,065] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:30,069] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:30,070] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:30,077] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:30,077] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:30,155] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:30,186] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:30,190] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:30,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:30,197] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:30,198] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:30,270] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:30,280] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:30,284] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:30,284] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:30,289] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:30,298] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:30,304] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:30,307] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:30,307] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:30,314] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:30,322] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:30,325] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:30,351] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:30,355] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:30,355] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:30,362] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:30,362] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:30,428] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:30,432] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:30,438] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:30,441] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:30,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:30,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:30,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:30,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:30,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:30,473] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:30,476] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:30,476] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_sorted_mapped.bam [2024-01-05 01:56:30,477] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_alignments.bam [2024-01-05 01:56:30,478] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_sorted_mapped.bam.bai [2024-01-05 01:56:30,478] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_alignments.bam.bai [2024-01-05 01:56:30,536] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:30,540] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:30,540] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:30,547] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:30,744] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:30,759] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland [2024-01-05 01:56:30,762] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland [2024-01-05 01:56:30,763] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland [2024-01-05 01:56:30,775] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland [2024-01-05 01:56:30,833] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland [2024-01-05 01:56:30,901] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:30,904] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:30,905] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:30,911] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:30,919] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:30,945] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-1-removed.bed [2024-01-05 01:56:31,016] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_read_SICER.out1 [2024-01-05 01:56:31,052] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_read_SICER.out1 [2024-01-05 01:56:31,055] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_read_SICER.out1 [2024-01-05 01:56:31,071] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_read_SICER.out1 [2024-01-05 01:56:31,136] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_read_SICER.out1 [2024-01-05 01:56:31,159] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25-W400-normalized.wig [2024-01-05 01:56:31,163] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25-W400-normalized.wig [2024-01-05 01:56:31,164] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25-W400-normalized.wig [2024-01-05 01:56:31,171] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25-W400-normalized.wig [2024-01-05 01:56:31,317] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25-W400-normalized.wig [2024-01-05 01:56:31,393] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25-W400.graph [2024-01-05 01:56:31,398] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25-W400.graph [2024-01-05 01:56:31,398] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25-W400.graph [2024-01-05 01:56:31,405] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25-W400.graph [2024-01-05 01:56:31,405] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25-W400.graph [2024-01-05 01:56:31,556] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25-W400.graph [2024-01-05 01:56:31,566] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:31,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:31,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:31,573] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:31,576] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:31,594] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:31,595] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:31,611] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:31,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:31,622] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:56:31,625] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:56:31,625] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:56:31,636] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:56:31,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:56:31,730] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:56:31,740] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:31,740] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_filtered_StrgtPks.bam [2024-01-05 01:56:31,740] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:31,740] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_StrgtPks_tab.bed [2024-01-05 01:56:31,741] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_filtered_StrgtPks.bam.bai [2024-01-05 01:56:31,741] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_StrgtPksRm_tab.bed [2024-01-05 01:56:31,746] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:31,750] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:31,750] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:31,755] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:31,764] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:31,770] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:31,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:31,783] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:31,786] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:31,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:31,792] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:31,802] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:31,805] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_summits.bed [2024-01-05 01:56:31,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_read_MACS2_peaks.out1 [2024-01-05 01:56:31,836] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_read_MACS2_peaks.out1 [2024-01-05 01:56:31,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_read_MACS2_peaks.out1 [2024-01-05 01:56:31,847] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_read_MACS2_peaks.out1 [2024-01-05 01:56:31,847] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_read_MACS2_peaks.out1 [2024-01-05 01:56:31,909] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_read_MACS2_peaks.out1 [2024-01-05 01:56:31,958] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:31,963] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:31,963] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:31,969] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:31,969] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:32,032] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:32,101] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:32,105] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:32,106] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:32,111] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:32,111] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:32,184] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:32,231] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:32,235] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:32,235] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:32,240] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:32,240] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:32,311] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:32,315] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:32,315] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:32,315] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:32,321] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:32,324] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:32,340] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:32,341] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:32,341] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:32,349] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,352] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,352] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,358] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,358] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,358] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,358] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,359] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,359] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,359] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,359] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,359] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,366] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_RiPPM_norm.bw [2024-01-05 01:56:32,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_hist.pdf [2024-01-05 01:56:32,379] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_metrics [2024-01-05 01:56:32,382] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_metrics [2024-01-05 01:56:32,402] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:32,405] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:32,406] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_sorted_mapped.bam [2024-01-05 01:56:32,406] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_sorted_mapped.bam.bai [2024-01-05 01:56:32,408] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_alignments.bam [2024-01-05 01:56:32,433] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_alignments.bam.bai [2024-01-05 01:56:32,440] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:56:32,443] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:56:32,443] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:56:32,474] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:56:32,476] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:56:32,642] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:56:32,649] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-1-removed.bed [2024-01-05 01:56:32,654] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:32,658] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:32,658] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:32,664] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:32,673] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:32,709] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14-W400.graph [2024-01-05 01:56:32,713] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14-W400.graph [2024-01-05 01:56:32,713] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14-W400.graph [2024-01-05 01:56:32,720] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14-W400.graph [2024-01-05 01:56:32,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14-W400.graph [2024-01-05 01:56:32,863] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14-W400.graph [2024-01-05 01:56:32,958] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_read_SICER.out1 [2024-01-05 01:56:32,988] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_read_SICER.out1 [2024-01-05 01:56:32,989] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_read_SICER.out1 [2024-01-05 01:56:32,997] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_read_SICER.out1 [2024-01-05 01:56:33,067] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_read_SICER.out1 [2024-01-05 01:56:33,094] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14-W400-normalized.wig [2024-01-05 01:56:33,098] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14-W400-normalized.wig [2024-01-05 01:56:33,098] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14-W400-normalized.wig [2024-01-05 01:56:33,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14-W400-normalized.wig [2024-01-05 01:56:33,248] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14-W400-normalized.wig [2024-01-05 01:56:33,290] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland [2024-01-05 01:56:33,294] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland [2024-01-05 01:56:33,294] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland [2024-01-05 01:56:33,299] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland [2024-01-05 01:56:33,354] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100.scoreisland [2024-01-05 01:56:33,384] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:33,388] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:33,388] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:33,394] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:33,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:33,536] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:33,536] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:33,542] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:33,545] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:33,561] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:33,561] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:33,561] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:33,561] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:33,562] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:33,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:33,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_StrgtPks_tab.bed [2024-01-05 01:56:33,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:33,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_filtered_StrgtPks.bam [2024-01-05 01:56:33,568] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_filtered_StrgtPks.bam.bai [2024-01-05 01:56:33,568] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_StrgtPksRm_tab.bed [2024-01-05 01:56:33,575] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,578] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,578] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,585] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,585] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,585] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,585] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,585] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,586] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,586] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,595] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_RiPPM_norm.bw [2024-01-05 01:56:33,601] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_metrics [2024-01-05 01:56:33,605] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_metrics [2024-01-05 01:56:33,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_hist.pdf [2024-01-05 01:56:33,623] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_summits.bed [2024-01-05 01:56:33,680] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:33,684] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:33,685] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:33,692] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:33,692] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:33,761] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:33,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_read_MACS2_peaks.out1 [2024-01-05 01:56:33,781] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_read_MACS2_peaks.out1 [2024-01-05 01:56:33,782] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_read_MACS2_peaks.out1 [2024-01-05 01:56:33,787] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_read_MACS2_peaks.out1 [2024-01-05 01:56:33,787] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_read_MACS2_peaks.out1 [2024-01-05 01:56:33,854] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_read_MACS2_peaks.out1 [2024-01-05 01:56:33,905] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:33,910] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:33,910] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:33,916] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:33,916] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:33,980] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:34,039] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:34,044] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:34,044] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:34,050] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:34,051] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:34,121] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:34,131] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:34,134] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:34,134] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:34,139] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:34,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:34,151] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:34,158] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:34,161] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:34,162] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:34,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:34,176] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:34,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:34,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:34,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:34,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:34,184] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:34,186] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:34,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:34,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:34,209] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:34,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:34,218] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:34,218] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_sorted_mapped.bam [2024-01-05 01:56:34,218] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_sorted_mapped.bam.bai [2024-01-05 01:56:34,221] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_alignments.bam.bai [2024-01-05 01:56:34,221] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_alignments.bam [2024-01-05 01:56:34,253] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:56:34,255] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:56:34,255] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:56:34,262] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:56:34,263] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:56:34,430] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:56:34,436] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_StrgtPks_tab.bed [2024-01-05 01:56:34,436] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_StrgtPksRm_tab.bed [2024-01-05 01:56:34,436] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:34,436] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_filtered_StrgtPks.bam [2024-01-05 01:56:34,437] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_filtered_StrgtPks.bam.bai [2024-01-05 01:56:34,437] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:34,442] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,445] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,445] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,450] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,459] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_RiPPM_norm.bw [2024-01-05 01:56:34,467] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_metrics [2024-01-05 01:56:34,470] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_metrics [2024-01-05 01:56:34,485] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_hist.pdf [2024-01-05 01:56:34,485] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-1-removed.bed [2024-01-05 01:56:34,511] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:34,516] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:34,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:34,528] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:34,701] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:34,758] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9-W400.graph [2024-01-05 01:56:34,761] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9-W400.graph [2024-01-05 01:56:34,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9-W400.graph [2024-01-05 01:56:34,769] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9-W400.graph [2024-01-05 01:56:34,770] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9-W400.graph [2024-01-05 01:56:34,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9-W400.graph [2024-01-05 01:56:34,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:34,930] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:34,931] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:34,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:34,946] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:34,949] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:34,975] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9-W400-normalized.wig [2024-01-05 01:56:34,979] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9-W400-normalized.wig [2024-01-05 01:56:34,980] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9-W400-normalized.wig [2024-01-05 01:56:34,987] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9-W400-normalized.wig [2024-01-05 01:56:35,123] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9-W400-normalized.wig [2024-01-05 01:56:35,138] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland [2024-01-05 01:56:35,141] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland [2024-01-05 01:56:35,141] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland [2024-01-05 01:56:35,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland [2024-01-05 01:56:35,210] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9-W400-G2400-E100.scoreisland [2024-01-05 01:56:35,239] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_read_SICER.out1 [2024-01-05 01:56:35,244] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_read_SICER.out1 [2024-01-05 01:56:35,244] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_read_SICER.out1 [2024-01-05 01:56:35,251] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_read_SICER.out1 [2024-01-05 01:56:35,309] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_read_SICER.out1 [2024-01-05 01:56:35,341] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:35,348] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:35,352] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:35,367] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:35,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:35,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:35,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:35,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:35,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:35,401] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:35,401] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:35,409] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:35,409] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:35,479] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:35,488] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:35,497] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:35,498] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:35,506] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:35,516] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:35,519] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:35,524] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:35,526] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:35,527] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:35,531] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:35,544] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:35,577] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_summits.bed [2024-01-05 01:56:35,608] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:35,613] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:35,614] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:35,620] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:35,620] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:35,689] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:35,713] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:35,717] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:35,718] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:35,724] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:35,725] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:35,797] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:35,803] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:35,816] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_read_MACS2_peaks.out1 [2024-01-05 01:56:35,820] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_read_MACS2_peaks.out1 [2024-01-05 01:56:35,820] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_read_MACS2_peaks.out1 [2024-01-05 01:56:35,829] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_read_MACS2_peaks.out1 [2024-01-05 01:56:35,829] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_read_MACS2_peaks.out1 [2024-01-05 01:56:35,899] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_read_MACS2_peaks.out1 [2024-01-05 01:56:35,903] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:35,903] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:35,903] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:35,908] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:35,911] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:35,931] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:35,931] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:35,932] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:35,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:35,937] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:35,938] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_alignments.bam.bai [2024-01-05 01:56:35,940] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_alignments.bam [2024-01-05 01:56:35,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_sorted_mapped.bam.bai [2024-01-05 01:56:35,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_sorted_mapped.bam [2024-01-05 01:56:35,968] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:56:35,972] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:56:35,973] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:56:35,979] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:56:35,979] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:56:36,073] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:56:36,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_filtered_StrgtPks.bam [2024-01-05 01:56:36,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_StrgtPksRm_tab.bed [2024-01-05 01:56:36,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:36,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_StrgtPks_tab.bed [2024-01-05 01:56:36,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_filtered_StrgtPks.bam.bai [2024-01-05 01:56:36,078] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:36,241] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11-W400-normalized.wig [2024-01-05 01:56:36,277] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11-W400-normalized.wig [2024-01-05 01:56:36,280] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11-W400-normalized.wig [2024-01-05 01:56:36,302] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11-W400-normalized.wig [2024-01-05 01:56:36,442] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11-W400-normalized.wig [2024-01-05 01:56:36,457] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-1-removed.bed [2024-01-05 01:56:36,458] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:36,496] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_read_SICER.out1 [2024-01-05 01:56:36,500] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_read_SICER.out1 [2024-01-05 01:56:36,501] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_read_SICER.out1 [2024-01-05 01:56:36,508] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_read_SICER.out1 [2024-01-05 01:56:36,581] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_read_SICER.out1 [2024-01-05 01:56:36,668] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland [2024-01-05 01:56:36,692] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland [2024-01-05 01:56:36,693] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland [2024-01-05 01:56:36,701] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland [2024-01-05 01:56:36,763] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland [2024-01-05 01:56:36,809] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:36,813] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:36,814] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:36,821] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:36,962] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:36,974] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:36,977] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:36,977] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:36,988] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:36,998] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:37,064] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11-W400.graph [2024-01-05 01:56:37,069] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11-W400.graph [2024-01-05 01:56:37,069] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11-W400.graph [2024-01-05 01:56:37,075] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11-W400.graph [2024-01-05 01:56:37,075] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11-W400.graph [2024-01-05 01:56:37,224] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11-W400.graph [2024-01-05 01:56:37,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:37,232] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:37,232] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:37,239] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:37,241] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:37,257] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:37,257] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:37,257] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:37,259] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:37,260] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_summits.bed [2024-01-05 01:56:37,320] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:37,325] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:37,325] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:37,334] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:37,334] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:37,411] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:37,445] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:37,450] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:37,451] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:37,458] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:37,459] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:37,537] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:37,547] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:37,550] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:37,550] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:37,556] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:37,566] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:37,577] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_read_MACS2_peaks.out1 [2024-01-05 01:56:37,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_read_MACS2_peaks.out1 [2024-01-05 01:56:37,579] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_read_MACS2_peaks.out1 [2024-01-05 01:56:37,585] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_read_MACS2_peaks.out1 [2024-01-05 01:56:37,585] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_read_MACS2_peaks.out1 [2024-01-05 01:56:37,654] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_read_MACS2_peaks.out1 [2024-01-05 01:56:37,660] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:37,695] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:37,700] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:37,700] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:37,708] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:37,708] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:37,778] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:37,787] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:37,789] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:37,790] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:37,795] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:37,802] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:37,803] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:37,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:37,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:37,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:37,809] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:37,813] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:37,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:37,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:37,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,836] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,842] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,842] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,842] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,842] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,843] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,848] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,848] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,848] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,849] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_RiPPM_norm.bw [2024-01-05 01:56:37,857] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_hist.pdf [2024-01-05 01:56:37,863] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_metrics [2024-01-05 01:56:37,867] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_metrics [2024-01-05 01:56:37,896] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:37,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:37,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_fragments.bed [2024-01-05 01:56:37,900] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_sorted_mapped.bam.bai [2024-01-05 01:56:37,903] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_alignments.bam [2024-01-05 01:56:37,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_alignments.bam.bai [2024-01-05 01:56:37,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_sorted_mapped.bam [2024-01-05 01:56:37,942] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:56:37,945] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:56:37,945] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:56:37,955] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:56:37,955] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:56:38,043] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:56:38,048] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_filtered_StrgtPks.bam.bai [2024-01-05 01:56:38,048] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_StrgtPks_tab.bed [2024-01-05 01:56:38,048] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:38,048] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:38,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_filtered_StrgtPks.bam [2024-01-05 01:56:38,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_StrgtPksRm_tab.bed [2024-01-05 01:56:38,069] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3-W400.graph [2024-01-05 01:56:38,071] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3-W400.graph [2024-01-05 01:56:38,072] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3-W400.graph [2024-01-05 01:56:38,078] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3-W400.graph [2024-01-05 01:56:38,078] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3-W400.graph [2024-01-05 01:56:38,222] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3-W400.graph [2024-01-05 01:56:38,263] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:38,266] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:38,266] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:38,277] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:38,288] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:38,363] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_read_SICER.out1 [2024-01-05 01:56:38,401] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_read_SICER.out1 [2024-01-05 01:56:38,405] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_read_SICER.out1 [2024-01-05 01:56:38,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_read_SICER.out1 [2024-01-05 01:56:38,559] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_read_SICER.out1 [2024-01-05 01:56:38,632] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3-W400-normalized.wig [2024-01-05 01:56:38,636] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3-W400-normalized.wig [2024-01-05 01:56:38,637] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3-W400-normalized.wig [2024-01-05 01:56:38,644] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3-W400-normalized.wig [2024-01-05 01:56:38,777] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3-W400-normalized.wig [2024-01-05 01:56:38,870] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:38,905] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:38,907] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:38,966] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:39,100] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:39,108] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-1-removed.bed [2024-01-05 01:56:39,116] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland [2024-01-05 01:56:39,119] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland [2024-01-05 01:56:39,119] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland [2024-01-05 01:56:39,131] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland [2024-01-05 01:56:39,185] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3-W400-G2400-E100.scoreisland [2024-01-05 01:56:39,189] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:39,189] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:39,195] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:39,198] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:39,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:39,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:39,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:39,215] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:39,216] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:39,221] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,223] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,224] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,234] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,234] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,235] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,235] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,235] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,235] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,235] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,236] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,246] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_RiPPM_norm.bw [2024-01-05 01:56:39,255] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_metrics [2024-01-05 01:56:39,258] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_metrics [2024-01-05 01:56:39,272] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_hist.pdf [2024-01-05 01:56:39,278] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_read_MACS2_peaks.out1 [2024-01-05 01:56:39,281] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_read_MACS2_peaks.out1 [2024-01-05 01:56:39,282] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_read_MACS2_peaks.out1 [2024-01-05 01:56:39,290] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_read_MACS2_peaks.out1 [2024-01-05 01:56:39,290] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_read_MACS2_peaks.out1 [2024-01-05 01:56:39,375] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_read_MACS2_peaks.out1 [2024-01-05 01:56:39,386] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:39,388] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:39,388] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:39,393] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:39,400] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:39,421] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:39,425] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:39,426] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:39,432] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:39,432] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:39,500] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:39,511] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:39,514] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:39,514] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:39,520] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:39,530] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:39,596] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_summits.bed [2024-01-05 01:56:39,598] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:39,632] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:39,636] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:39,636] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:39,643] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:39,644] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:39,718] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:39,752] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:39,755] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:39,756] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:39,767] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:39,767] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:39,834] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:39,839] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:39,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:39,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:39,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:39,847] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:39,849] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:39,863] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:39,863] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:39,864] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:39,871] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:39,874] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:39,874] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_alignments.bam [2024-01-05 01:56:39,876] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_alignments.bam.bai [2024-01-05 01:56:39,903] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_sorted_mapped.bam.bai [2024-01-05 01:56:39,907] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_sorted_mapped.bam [2024-01-05 01:56:39,913] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:56:39,916] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:56:39,917] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:56:39,923] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:56:39,923] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:56:40,013] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:56:40,024] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_read_MACS2_peaks.out1 [2024-01-05 01:56:40,027] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_read_MACS2_peaks.out1 [2024-01-05 01:56:40,027] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_read_MACS2_peaks.out1 [2024-01-05 01:56:40,032] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_read_MACS2_peaks.out1 [2024-01-05 01:56:40,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_read_MACS2_peaks.out1 [2024-01-05 01:56:40,105] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_read_MACS2_peaks.out1 [2024-01-05 01:56:40,152] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:40,157] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:40,158] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:40,164] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:40,164] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:40,234] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:40,286] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:40,290] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:40,290] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:40,296] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:40,296] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:40,363] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:40,439] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:40,442] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:40,443] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:40,449] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:40,449] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:40,519] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:40,527] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:40,529] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:40,530] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:40,534] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:40,541] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:40,548] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:40,551] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:40,551] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:40,556] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:40,565] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:40,566] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:40,567] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:40,569] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_summits.bed [2024-01-05 01:56:40,628] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:40,629] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:40,631] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:40,687] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:40,736] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:40,772] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:40,772] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:40,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:40,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_filtered_StrgtPks.bam [2024-01-05 01:56:40,773] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_filtered_StrgtPks.bam.bai [2024-01-05 01:56:40,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_StrgtPks_tab.bed [2024-01-05 01:56:40,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_StrgtPksRm_tab.bed [2024-01-05 01:56:40,774] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:40,775] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:40,781] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,784] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,784] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,788] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,788] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,789] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,795] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_RiPPM_norm.bw [2024-01-05 01:56:40,859] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:40,864] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:40,865] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:40,871] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:40,997] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:41,027] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-1-removed.bed [2024-01-05 01:56:41,038] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_read_SICER.out1 [2024-01-05 01:56:41,041] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_read_SICER.out1 [2024-01-05 01:56:41,042] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_read_SICER.out1 [2024-01-05 01:56:41,053] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_read_SICER.out1 [2024-01-05 01:56:41,226] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_read_SICER.out1 [2024-01-05 01:56:41,239] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland [2024-01-05 01:56:41,241] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland [2024-01-05 01:56:41,241] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland [2024-01-05 01:56:41,248] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland [2024-01-05 01:56:41,310] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland [2024-01-05 01:56:41,377] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42-W400-normalized.wig [2024-01-05 01:56:41,381] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42-W400-normalized.wig [2024-01-05 01:56:41,382] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42-W400-normalized.wig [2024-01-05 01:56:41,389] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42-W400-normalized.wig [2024-01-05 01:56:41,525] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42-W400-normalized.wig [2024-01-05 01:56:41,544] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:41,555] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:41,559] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:41,560] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:41,566] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:41,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:41,623] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42-W400.graph [2024-01-05 01:56:41,628] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42-W400.graph [2024-01-05 01:56:41,628] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42-W400.graph [2024-01-05 01:56:41,635] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42-W400.graph [2024-01-05 01:56:41,635] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42-W400.graph [2024-01-05 01:56:41,772] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42-W400.graph [2024-01-05 01:56:41,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:41,786] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:41,786] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:41,793] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:41,802] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:41,818] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:41,818] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:41,819] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:41,826] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_metrics [2024-01-05 01:56:41,829] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_metrics [2024-01-05 01:56:41,853] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_hist.pdf [2024-01-05 01:56:41,858] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:41,861] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:41,861] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_alignments.bam [2024-01-05 01:56:41,863] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_sorted_mapped.bam.bai [2024-01-05 01:56:41,886] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_sorted_mapped.bam [2024-01-05 01:56:41,886] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_alignments.bam.bai [2024-01-05 01:56:41,949] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31-W400.graph [2024-01-05 01:56:41,953] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31-W400.graph [2024-01-05 01:56:41,954] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31-W400.graph [2024-01-05 01:56:41,959] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31-W400.graph [2024-01-05 01:56:41,959] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31-W400.graph [2024-01-05 01:56:42,108] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31-W400.graph [2024-01-05 01:56:42,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-1-removed.bed [2024-01-05 01:56:42,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:42,166] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31-W400-normalized.wig [2024-01-05 01:56:42,170] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31-W400-normalized.wig [2024-01-05 01:56:42,170] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31-W400-normalized.wig [2024-01-05 01:56:42,178] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31-W400-normalized.wig [2024-01-05 01:56:42,318] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31-W400-normalized.wig [2024-01-05 01:56:42,332] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland [2024-01-05 01:56:42,340] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland [2024-01-05 01:56:42,340] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland [2024-01-05 01:56:42,344] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland [2024-01-05 01:56:42,401] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland [2024-01-05 01:56:42,451] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:42,455] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:42,456] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:42,463] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:42,627] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:42,711] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:42,716] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:42,716] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:42,723] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:42,731] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:42,740] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_read_SICER.out1 [2024-01-05 01:56:42,742] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_read_SICER.out1 [2024-01-05 01:56:42,743] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_read_SICER.out1 [2024-01-05 01:56:42,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_read_SICER.out1 [2024-01-05 01:56:42,811] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_read_SICER.out1 [2024-01-05 01:56:42,815] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:42,821] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:42,824] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:42,842] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:42,842] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:42,843] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:42,843] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:42,843] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:42,850] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:56:42,852] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:56:42,853] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:56:42,857] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:56:42,858] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:56:42,954] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:56:42,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_StrgtPksRm_tab.bed [2024-01-05 01:56:42,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_filtered_StrgtPks.bam.bai [2024-01-05 01:56:42,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:42,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:42,962] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_filtered_StrgtPks.bam [2024-01-05 01:56:42,963] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_StrgtPks_tab.bed [2024-01-05 01:56:42,969] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:42,997] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,000] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,063] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,063] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,065] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,065] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,065] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,065] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,065] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,066] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,067] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,115] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_RiPPM_norm.bw [2024-01-05 01:56:43,117] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_summits.bed [2024-01-05 01:56:43,145] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:43,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:43,150] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:43,157] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:43,158] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:43,241] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:43,251] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:43,254] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:43,254] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:43,259] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:43,268] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:43,356] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:43,360] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:43,361] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:43,368] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:43,368] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:43,442] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:43,472] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:43,486] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_read_MACS2_peaks.out1 [2024-01-05 01:56:43,490] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_read_MACS2_peaks.out1 [2024-01-05 01:56:43,490] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_read_MACS2_peaks.out1 [2024-01-05 01:56:43,495] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_read_MACS2_peaks.out1 [2024-01-05 01:56:43,495] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_read_MACS2_peaks.out1 [2024-01-05 01:56:43,568] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_read_MACS2_peaks.out1 [2024-01-05 01:56:43,635] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:43,640] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:43,640] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:43,648] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:43,659] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:43,688] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:43,692] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:43,692] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:43,699] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:43,700] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:43,770] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:43,775] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:43,776] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:43,781] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:43,785] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:43,803] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:43,803] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:43,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:43,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:43,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:43,804] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_hist.pdf [2024-01-05 01:56:43,811] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_metrics [2024-01-05 01:56:43,815] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_metrics [2024-01-05 01:56:43,841] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:43,844] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:43,844] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_alignments.bam [2024-01-05 01:56:43,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_alignments.bam.bai [2024-01-05 01:56:43,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_sorted_mapped.bam.bai [2024-01-05 01:56:43,845] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_sorted_mapped.bam [2024-01-05 01:56:43,880] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:56:43,883] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:56:43,883] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:56:43,889] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:56:43,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:56:43,982] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:56:44,036] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20-W400.graph [2024-01-05 01:56:44,040] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20-W400.graph [2024-01-05 01:56:44,041] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20-W400.graph [2024-01-05 01:56:44,053] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20-W400.graph [2024-01-05 01:56:44,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20-W400.graph [2024-01-05 01:56:44,184] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20-W400.graph [2024-01-05 01:56:44,197] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:44,199] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:44,199] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:44,204] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:44,211] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:44,270] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland [2024-01-05 01:56:44,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland [2024-01-05 01:56:44,274] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland [2024-01-05 01:56:44,283] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland [2024-01-05 01:56:44,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100.scoreisland [2024-01-05 01:56:44,337] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-1-removed.bed [2024-01-05 01:56:44,356] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20-W400-normalized.wig [2024-01-05 01:56:44,360] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20-W400-normalized.wig [2024-01-05 01:56:44,361] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20-W400-normalized.wig [2024-01-05 01:56:44,374] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20-W400-normalized.wig [2024-01-05 01:56:44,502] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20-W400-normalized.wig [2024-01-05 01:56:44,510] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:44,527] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:44,530] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:44,530] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:44,536] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:44,660] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:44,750] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_read_SICER.out1 [2024-01-05 01:56:44,785] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_read_SICER.out1 [2024-01-05 01:56:44,789] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_read_SICER.out1 [2024-01-05 01:56:44,813] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_read_SICER.out1 [2024-01-05 01:56:44,871] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_read_SICER.out1 [2024-01-05 01:56:44,875] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:44,875] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:44,880] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:44,883] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:44,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:44,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:44,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:44,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:44,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_filtered_StrgtPks.bam.bai [2024-01-05 01:56:44,899] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_StrgtPksRm_tab.bed [2024-01-05 01:56:44,900] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_StrgtPks_tab.bed [2024-01-05 01:56:44,900] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_filtered_StrgtPks.bam [2024-01-05 01:56:44,906] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:44,906] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:44,908] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:44,966] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:44,971] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:44,971] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:44,977] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:44,978] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:45,050] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:45,092] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:45,138] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:45,142] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:45,208] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:45,210] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:45,295] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:45,334] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:45,339] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:45,339] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:45,347] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:45,347] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:45,410] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:45,460] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:45,468] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:45,472] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:45,472] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:45,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:45,486] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:45,492] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:45,495] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:45,495] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:45,501] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:45,508] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:45,510] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_summits.bed [2024-01-05 01:56:45,517] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_read_MACS2_peaks.out1 [2024-01-05 01:56:45,520] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_read_MACS2_peaks.out1 [2024-01-05 01:56:45,520] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_read_MACS2_peaks.out1 [2024-01-05 01:56:45,526] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_read_MACS2_peaks.out1 [2024-01-05 01:56:45,527] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_read_MACS2_peaks.out1 [2024-01-05 01:56:45,604] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_read_MACS2_peaks.out1 [2024-01-05 01:56:45,608] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:45,614] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:45,618] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:45,639] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:45,639] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:45,639] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:45,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:45,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:45,653] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,655] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,656] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,664] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,665] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,665] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,665] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,665] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,665] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,665] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,674] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_RiPPM_norm.bw [2024-01-05 01:56:45,682] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_metrics [2024-01-05 01:56:45,685] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_metrics [2024-01-05 01:56:45,706] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_hist.pdf [2024-01-05 01:56:45,712] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:45,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:45,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_alignments.bam.bai [2024-01-05 01:56:45,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_sorted_mapped.bam.bai [2024-01-05 01:56:45,715] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_sorted_mapped.bam [2024-01-05 01:56:45,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_fragments.bed [2024-01-05 01:56:45,742] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_alignments.bam [2024-01-05 01:56:45,747] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:56:45,750] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:56:45,751] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:56:45,765] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:56:45,766] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:56:45,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:56:45,868] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:45,878] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_read_MACS2_peaks.out1 [2024-01-05 01:56:45,881] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_read_MACS2_peaks.out1 [2024-01-05 01:56:45,882] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_read_MACS2_peaks.out1 [2024-01-05 01:56:45,888] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_read_MACS2_peaks.out1 [2024-01-05 01:56:45,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_read_MACS2_peaks.out1 [2024-01-05 01:56:45,949] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_read_MACS2_peaks.out1 [2024-01-05 01:56:45,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:46,015] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:46,020] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:46,021] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:46,026] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:46,027] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:46,098] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:46,109] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:46,111] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:46,112] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:46,117] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:46,125] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:46,131] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:46,134] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:46,134] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:46,140] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:46,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:46,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:46,193] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:46,193] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:46,200] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:46,200] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:46,269] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:46,298] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_summits.bed [2024-01-05 01:56:46,339] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:46,344] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:46,344] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:46,351] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:46,351] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:46,420] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:46,424] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:46,424] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:46,425] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:46,432] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:46,435] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:46,453] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:46,453] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:46,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:46,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_filtered_StrgtPks.bam [2024-01-05 01:56:46,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_StrgtPks_tab.bed [2024-01-05 01:56:46,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_filtered_StrgtPks.bam.bai [2024-01-05 01:56:46,454] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:46,455] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_StrgtPksRm_tab.bed [2024-01-05 01:56:46,455] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:46,490] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_read_SICER.out1 [2024-01-05 01:56:46,495] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_read_SICER.out1 [2024-01-05 01:56:46,495] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_read_SICER.out1 [2024-01-05 01:56:46,507] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_read_SICER.out1 [2024-01-05 01:56:46,567] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_read_SICER.out1 [2024-01-05 01:56:46,615] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland [2024-01-05 01:56:46,619] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland [2024-01-05 01:56:46,619] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland [2024-01-05 01:56:46,626] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland [2024-01-05 01:56:46,679] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland [2024-01-05 01:56:46,683] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:46,743] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5-W400-normalized.wig [2024-01-05 01:56:46,747] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5-W400-normalized.wig [2024-01-05 01:56:46,748] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5-W400-normalized.wig [2024-01-05 01:56:46,754] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5-W400-normalized.wig [2024-01-05 01:56:46,955] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5-W400-normalized.wig [2024-01-05 01:56:47,004] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5-W400.graph [2024-01-05 01:56:47,009] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5-W400.graph [2024-01-05 01:56:47,009] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5-W400.graph [2024-01-05 01:56:47,015] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5-W400.graph [2024-01-05 01:56:47,015] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5-W400.graph [2024-01-05 01:56:47,145] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5-W400.graph [2024-01-05 01:56:47,204] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:47,208] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:47,209] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:47,216] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:47,426] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:47,473] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:47,477] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:47,478] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:47,485] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:47,493] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:47,552] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-1-removed.bed [2024-01-05 01:56:47,552] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:47,553] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:47,559] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:47,562] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:47,582] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:47,582] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:47,582] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:47,582] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:47,588] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,592] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,592] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,597] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,598] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,598] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,598] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,598] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,598] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,598] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,605] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_RiPPM_norm.bw [2024-01-05 01:56:47,613] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_metrics [2024-01-05 01:56:47,616] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_metrics [2024-01-05 01:56:47,632] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_hist.pdf [2024-01-05 01:56:47,649] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:47,652] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:47,693] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_sorted_mapped.bam.bai [2024-01-05 01:56:47,693] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_alignments.bam [2024-01-05 01:56:47,693] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_alignments.bam.bai [2024-01-05 01:56:47,693] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_sorted_mapped.bam [2024-01-05 01:56:47,731] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:47,735] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:47,736] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:47,742] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:47,742] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:47,816] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:47,897] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:47,901] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:47,902] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:47,910] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:47,910] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:47,992] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:48,012] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:48,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:48,016] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:48,021] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:48,029] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:48,037] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:48,040] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:48,040] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:48,045] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:48,055] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:48,086] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_summits.bed [2024-01-05 01:56:48,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:48,090] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:48,119] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:48,123] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:48,124] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:48,130] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:48,130] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:48,199] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:48,215] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_read_MACS2_peaks.out1 [2024-01-05 01:56:48,217] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_read_MACS2_peaks.out1 [2024-01-05 01:56:48,217] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_read_MACS2_peaks.out1 [2024-01-05 01:56:48,221] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_read_MACS2_peaks.out1 [2024-01-05 01:56:48,221] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_read_MACS2_peaks.out1 [2024-01-05 01:56:48,286] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_read_MACS2_peaks.out1 [2024-01-05 01:56:48,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:48,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:48,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:48,299] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:48,319] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:48,319] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:48,319] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:48,319] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:48,327] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:56:48,329] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:56:48,330] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:56:48,335] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:56:48,335] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:56:48,429] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:56:48,434] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_filtered_StrgtPks.bam [2024-01-05 01:56:48,434] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_filtered_StrgtPks.bam.bai [2024-01-05 01:56:48,434] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_StrgtPks_tab.bed [2024-01-05 01:56:48,434] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_StrgtPksRm_tab.bed [2024-01-05 01:56:48,435] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:48,435] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:48,440] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,443] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,444] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,448] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,449] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,457] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_RiPPM_norm.bw [2024-01-05 01:56:48,459] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_hist.pdf [2024-01-05 01:56:48,469] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_metrics [2024-01-05 01:56:48,473] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_metrics [2024-01-05 01:56:48,513] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50-W400.graph [2024-01-05 01:56:48,516] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50-W400.graph [2024-01-05 01:56:48,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50-W400.graph [2024-01-05 01:56:48,524] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50-W400.graph [2024-01-05 01:56:48,530] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50-W400.graph [2024-01-05 01:56:48,701] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50-W400.graph [2024-01-05 01:56:48,711] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:48,717] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:48,720] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:48,720] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:48,725] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:48,733] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:48,757] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:48,761] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:48,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:48,768] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:48,953] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:49,016] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50-W400-normalized.wig [2024-01-05 01:56:49,019] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50-W400-normalized.wig [2024-01-05 01:56:49,020] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50-W400-normalized.wig [2024-01-05 01:56:49,026] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50-W400-normalized.wig [2024-01-05 01:56:49,027] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50-W400-normalized.wig [2024-01-05 01:56:49,190] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50-W400-normalized.wig [2024-01-05 01:56:49,204] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-1-removed.bed [2024-01-05 01:56:49,211] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_read_SICER.out1 [2024-01-05 01:56:49,215] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_read_SICER.out1 [2024-01-05 01:56:49,215] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_read_SICER.out1 [2024-01-05 01:56:49,221] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_read_SICER.out1 [2024-01-05 01:56:49,347] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_read_SICER.out1 [2024-01-05 01:56:49,387] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland [2024-01-05 01:56:49,396] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland [2024-01-05 01:56:49,397] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland [2024-01-05 01:56:49,402] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland [2024-01-05 01:56:49,460] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50-W400-G2400-E100.scoreisland [2024-01-05 01:56:49,491] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:49,492] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:49,502] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:49,505] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:49,517] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:49,517] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:49,518] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:49,518] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:49,526] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:49,528] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:49,529] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_sorted_mapped.bam.bai [2024-01-05 01:56:49,529] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_sorted_mapped.bam [2024-01-05 01:56:49,536] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_alignments.bam [2024-01-05 01:56:49,536] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_alignments.bam.bai [2024-01-05 01:56:49,576] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:56:49,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:56:49,579] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:56:49,585] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:56:49,585] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:56:49,681] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:56:49,686] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_StrgtPksRm_tab.bed [2024-01-05 01:56:49,687] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_filtered_StrgtPks.bam [2024-01-05 01:56:49,687] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:49,687] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_filtered_StrgtPks.bam.bai [2024-01-05 01:56:49,688] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_StrgtPks_tab.bed [2024-01-05 01:56:49,688] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:49,694] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,697] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,697] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,702] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,703] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,715] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_RiPPM_norm.bw [2024-01-05 01:56:49,716] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_hist.pdf [2024-01-05 01:56:49,722] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_metrics [2024-01-05 01:56:49,725] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_metrics [2024-01-05 01:56:49,747] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_summits.bed [2024-01-05 01:56:49,774] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:49,777] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:49,778] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:49,785] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:49,785] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:49,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:49,867] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_read_MACS2_peaks.out1 [2024-01-05 01:56:49,869] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_read_MACS2_peaks.out1 [2024-01-05 01:56:49,870] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_read_MACS2_peaks.out1 [2024-01-05 01:56:49,875] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_read_MACS2_peaks.out1 [2024-01-05 01:56:49,876] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_read_MACS2_peaks.out1 [2024-01-05 01:56:49,947] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_read_MACS2_peaks.out1 [2024-01-05 01:56:49,956] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:49,959] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:49,959] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:49,964] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:49,972] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:50,077] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:50,082] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:50,082] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:50,089] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:50,089] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:50,157] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:50,163] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:50,183] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:50,188] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:50,188] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:50,195] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:50,195] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:50,264] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:50,274] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:50,277] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:50,278] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:50,284] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:50,291] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:50,295] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:50,295] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:50,295] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:50,302] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:50,307] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:50,327] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:50,328] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:50,328] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:50,328] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:50,333] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:50,336] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:50,336] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:50,341] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:50,355] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:50,395] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49-W400-normalized.wig [2024-01-05 01:56:50,399] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49-W400-normalized.wig [2024-01-05 01:56:50,400] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49-W400-normalized.wig [2024-01-05 01:56:50,405] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49-W400-normalized.wig [2024-01-05 01:56:50,406] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49-W400-normalized.wig [2024-01-05 01:56:50,562] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49-W400-normalized.wig [2024-01-05 01:56:50,603] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49-W400.graph [2024-01-05 01:56:50,607] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49-W400.graph [2024-01-05 01:56:50,608] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49-W400.graph [2024-01-05 01:56:50,615] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49-W400.graph [2024-01-05 01:56:50,615] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49-W400.graph [2024-01-05 01:56:50,789] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49-W400.graph [2024-01-05 01:56:50,826] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:50,830] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:50,831] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:50,837] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:51,047] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:51,094] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_read_SICER.out1 [2024-01-05 01:56:51,097] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_read_SICER.out1 [2024-01-05 01:56:51,098] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_read_SICER.out1 [2024-01-05 01:56:51,109] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_read_SICER.out1 [2024-01-05 01:56:51,163] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_read_SICER.out1 [2024-01-05 01:56:51,168] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:51,175] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland [2024-01-05 01:56:51,178] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland [2024-01-05 01:56:51,178] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland [2024-01-05 01:56:51,184] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland [2024-01-05 01:56:51,239] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49-W400-G2400-E100.scoreisland [2024-01-05 01:56:51,244] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-1-removed.bed [2024-01-05 01:56:51,244] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:51,244] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:51,244] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:51,251] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:51,254] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:51,267] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:51,268] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:51,268] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:51,273] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:51,276] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:51,304] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_sorted_mapped.bam [2024-01-05 01:56:51,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_alignments.bam.bai [2024-01-05 01:56:51,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_alignments.bam [2024-01-05 01:56:51,306] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_sorted_mapped.bam.bai [2024-01-05 01:56:51,313] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:56:51,321] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:56:51,321] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:56:51,327] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:56:51,328] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:56:51,506] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:56:51,513] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_StrgtPksRm_tab.bed [2024-01-05 01:56:51,513] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:51,514] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:51,514] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_StrgtPks_tab.bed [2024-01-05 01:56:51,514] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_filtered_StrgtPks.bam.bai [2024-01-05 01:56:51,514] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_filtered_StrgtPks.bam [2024-01-05 01:56:51,521] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:51,524] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:51,524] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:51,529] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:51,544] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:51,547] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:51,593] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:51,598] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:51,599] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:51,606] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:51,606] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:51,679] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:51,706] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:51,711] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:51,712] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:51,718] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:51,719] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:51,798] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:51,866] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:51,871] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:51,871] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:51,878] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:51,878] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:51,949] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:51,963] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:51,966] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:51,966] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:51,971] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:51,978] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:51,988] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_read_MACS2_peaks.out1 [2024-01-05 01:56:51,991] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_read_MACS2_peaks.out1 [2024-01-05 01:56:51,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_read_MACS2_peaks.out1 [2024-01-05 01:56:52,001] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_read_MACS2_peaks.out1 [2024-01-05 01:56:52,001] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_read_MACS2_peaks.out1 [2024-01-05 01:56:52,079] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_read_MACS2_peaks.out1 [2024-01-05 01:56:52,092] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_summits.bed [2024-01-05 01:56:52,097] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:52,097] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:52,106] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:52,109] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:52,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:52,123] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:52,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:52,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:52,124] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:52,126] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-1-removed.bed [2024-01-05 01:56:52,182] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38-W400-normalized.wig [2024-01-05 01:56:52,187] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38-W400-normalized.wig [2024-01-05 01:56:52,187] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38-W400-normalized.wig [2024-01-05 01:56:52,194] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38-W400-normalized.wig [2024-01-05 01:56:52,328] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38-W400-normalized.wig [2024-01-05 01:56:52,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38-W400.graph [2024-01-05 01:56:52,400] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38-W400.graph [2024-01-05 01:56:52,401] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38-W400.graph [2024-01-05 01:56:52,409] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38-W400.graph [2024-01-05 01:56:52,409] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38-W400.graph [2024-01-05 01:56:52,554] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38-W400.graph [2024-01-05 01:56:52,569] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_read_SICER.out1 [2024-01-05 01:56:52,572] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_read_SICER.out1 [2024-01-05 01:56:52,572] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_read_SICER.out1 [2024-01-05 01:56:52,580] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_read_SICER.out1 [2024-01-05 01:56:52,651] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_read_SICER.out1 [2024-01-05 01:56:52,679] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:52,683] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:52,684] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:52,691] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:52,829] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:52,840] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:52,849] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:52,853] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:52,853] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:52,859] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:52,867] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:52,874] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland [2024-01-05 01:56:52,878] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland [2024-01-05 01:56:52,878] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland [2024-01-05 01:56:52,883] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,031] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:53,040] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:53,045] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:53,049] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:53,062] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:53,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:53,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:53,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:53,069] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,073] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,073] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,078] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,085] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_RiPPM_norm.bw [2024-01-05 01:56:53,093] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_metrics [2024-01-05 01:56:53,096] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_metrics [2024-01-05 01:56:53,111] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_hist.pdf [2024-01-05 01:56:53,116] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:53,119] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:53,120] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_alignments.bam.bai [2024-01-05 01:56:53,120] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_alignments.bam [2024-01-05 01:56:53,161] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_sorted_mapped.bam.bai [2024-01-05 01:56:53,162] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_sorted_mapped.bam [2024-01-05 01:56:53,168] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:53,170] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:53,170] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:53,176] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:53,185] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:53,217] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27-W400.graph [2024-01-05 01:56:53,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27-W400.graph [2024-01-05 01:56:53,222] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27-W400.graph [2024-01-05 01:56:53,228] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27-W400.graph [2024-01-05 01:56:53,229] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27-W400.graph [2024-01-05 01:56:53,441] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27-W400.graph [2024-01-05 01:56:53,456] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_read_SICER.out1 [2024-01-05 01:56:53,458] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_read_SICER.out1 [2024-01-05 01:56:53,459] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_read_SICER.out1 [2024-01-05 01:56:53,465] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_read_SICER.out1 [2024-01-05 01:56:53,528] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_read_SICER.out1 [2024-01-05 01:56:53,568] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,571] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,572] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,584] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,634] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100.scoreisland [2024-01-05 01:56:53,640] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:53,641] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-1-removed.bed [2024-01-05 01:56:53,670] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27-W400-normalized.wig [2024-01-05 01:56:53,675] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27-W400-normalized.wig [2024-01-05 01:56:53,675] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27-W400-normalized.wig [2024-01-05 01:56:53,683] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27-W400-normalized.wig [2024-01-05 01:56:53,831] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27-W400-normalized.wig [2024-01-05 01:56:53,864] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:53,868] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:53,869] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:53,875] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:54,008] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:54,021] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:54,021] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:54,021] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:54,027] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:54,030] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:54,054] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:54,054] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:54,054] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:54,062] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:56:54,065] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:56:54,065] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:56:54,071] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:56:54,072] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:56:54,169] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:56:54,175] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:54,175] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_filtered_StrgtPks.bam.bai [2024-01-05 01:56:54,175] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_StrgtPksRm_tab.bed [2024-01-05 01:56:54,176] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:54,176] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_StrgtPks_tab.bed [2024-01-05 01:56:54,176] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_filtered_StrgtPks.bam [2024-01-05 01:56:54,178] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:54,179] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_summits.bed [2024-01-05 01:56:54,266] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:54,271] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:54,272] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:54,278] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:54,278] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:54,350] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:54,362] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_read_MACS2_peaks.out1 [2024-01-05 01:56:54,365] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_read_MACS2_peaks.out1 [2024-01-05 01:56:54,366] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_read_MACS2_peaks.out1 [2024-01-05 01:56:54,372] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_read_MACS2_peaks.out1 [2024-01-05 01:56:54,373] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_read_MACS2_peaks.out1 [2024-01-05 01:56:54,434] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_read_MACS2_peaks.out1 [2024-01-05 01:56:54,459] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:54,463] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:54,464] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:54,472] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:54,472] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:54,538] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:54,546] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:54,549] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:54,549] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:54,559] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:54,567] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:54,578] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:54,582] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:54,582] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:54,588] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:54,597] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:54,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:54,626] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:54,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:54,630] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:54,638] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:54,639] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:54,793] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:54,797] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:54,797] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:54,797] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:54,798] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:54,804] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:54,808] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:54,824] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:54,824] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:54,830] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,833] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,833] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,838] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,838] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,839] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,848] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_RiPPM_norm.bw [2024-01-05 01:56:54,856] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_metrics [2024-01-05 01:56:54,859] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_metrics [2024-01-05 01:56:54,886] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_hist.pdf [2024-01-05 01:56:54,891] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:54,894] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:54,897] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_sorted_mapped.bam [2024-01-05 01:56:54,897] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_alignments.bam.bai [2024-01-05 01:56:54,922] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_sorted_mapped.bam.bai [2024-01-05 01:56:54,923] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_alignments.bam [2024-01-05 01:56:54,925] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-1-removed.bed [2024-01-05 01:56:54,933] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland [2024-01-05 01:56:54,936] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland [2024-01-05 01:56:54,936] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland [2024-01-05 01:56:54,942] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland [2024-01-05 01:56:54,996] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland [2024-01-05 01:56:55,072] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16-W400.graph [2024-01-05 01:56:55,115] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16-W400.graph [2024-01-05 01:56:55,119] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16-W400.graph [2024-01-05 01:56:55,132] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16-W400.graph [2024-01-05 01:56:55,133] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16-W400.graph [2024-01-05 01:56:55,278] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16-W400.graph [2024-01-05 01:56:55,311] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:55,338] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16-W400-normalized.wig [2024-01-05 01:56:55,342] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16-W400-normalized.wig [2024-01-05 01:56:55,343] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16-W400-normalized.wig [2024-01-05 01:56:55,349] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16-W400-normalized.wig [2024-01-05 01:56:55,489] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16-W400-normalized.wig [2024-01-05 01:56:55,503] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:55,506] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:55,507] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:55,512] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:55,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:55,635] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_read_SICER.out1 [2024-01-05 01:56:55,639] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_read_SICER.out1 [2024-01-05 01:56:55,640] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_read_SICER.out1 [2024-01-05 01:56:55,647] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_read_SICER.out1 [2024-01-05 01:56:55,701] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_read_SICER.out1 [2024-01-05 01:56:55,725] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:55,734] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:55,735] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:55,742] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:55,873] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:55,880] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:55,880] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:55,880] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:55,887] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:55,890] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:55,906] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:55,906] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:55,906] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:55,911] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:56:55,914] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:56:55,915] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:56:55,919] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:56:55,919] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:56:56,015] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:56:56,057] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_read_MACS2_peaks.out1 [2024-01-05 01:56:56,060] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_read_MACS2_peaks.out1 [2024-01-05 01:56:56,061] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_read_MACS2_peaks.out1 [2024-01-05 01:56:56,070] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_read_MACS2_peaks.out1 [2024-01-05 01:56:56,070] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_read_MACS2_peaks.out1 [2024-01-05 01:56:56,141] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_read_MACS2_peaks.out1 [2024-01-05 01:56:56,150] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:56,153] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:56,153] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:56,164] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:56,170] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:56,172] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:56,174] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_summits.bed [2024-01-05 01:56:56,272] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:56,277] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:56,277] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:56,284] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:56,285] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:56,389] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:56,451] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:56,455] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:56,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:56,462] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:56,462] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:56,533] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:56,560] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:56,564] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:56,564] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:56,570] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:56,570] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:56,644] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:56,653] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:56,656] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:56,656] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:56,662] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:56,687] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:56,709] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:56,712] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:56,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:56,771] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:56,787] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:56,811] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:56,811] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:56,811] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:56,812] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:56,812] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:56,812] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:56,813] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_filtered_StrgtPks.bam.bai [2024-01-05 01:56:56,813] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_StrgtPks_tab.bed [2024-01-05 01:56:56,813] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_filtered_StrgtPks.bam [2024-01-05 01:56:56,813] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_StrgtPksRm_tab.bed [2024-01-05 01:56:56,820] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,823] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,823] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,828] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,829] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,829] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,829] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,829] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,829] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,829] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,836] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_RiPPM_norm.bw [2024-01-05 01:56:56,837] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_hist.pdf [2024-01-05 01:56:56,843] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_metrics [2024-01-05 01:56:56,846] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_metrics [2024-01-05 01:56:56,873] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:56,876] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:56,909] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_alignments.bam [2024-01-05 01:56:56,910] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_sorted_mapped.bam [2024-01-05 01:56:56,911] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_alignments.bam.bai [2024-01-05 01:56:56,911] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_sorted_mapped.bam.bai [2024-01-05 01:56:56,916] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:56:56,919] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:56:56,919] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:56:56,924] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:56:56,925] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:56:57,021] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:56:57,026] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_filtered_StrgtPks.bam.bai [2024-01-05 01:56:57,026] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_StrgtPks_tab.bed [2024-01-05 01:56:57,026] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:57,027] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_filtered_StrgtPks.bam [2024-01-05 01:56:57,027] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:57,027] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_StrgtPksRm_tab.bed [2024-01-05 01:56:57,030] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:57,065] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:57,069] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:57,069] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:57,076] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:57,076] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:57,150] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:57,196] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:57,201] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:57,201] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:57,208] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:57,208] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:57,281] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:57,342] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_summits.bed [2024-01-05 01:56:57,397] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:57,402] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:57,402] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:57,408] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:57,408] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:57,474] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:57,483] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:57,486] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:57,486] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:57,492] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:57,502] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:57,504] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:57,511] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:57,513] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:57,514] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:57,519] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:57,527] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:57,537] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_read_MACS2_peaks.out1 [2024-01-05 01:56:57,540] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_read_MACS2_peaks.out1 [2024-01-05 01:56:57,540] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_read_MACS2_peaks.out1 [2024-01-05 01:56:57,550] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_read_MACS2_peaks.out1 [2024-01-05 01:56:57,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_read_MACS2_peaks.out1 [2024-01-05 01:56:57,614] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_read_MACS2_peaks.out1 [2024-01-05 01:56:57,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:57,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:57,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:57,623] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:57,626] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:57,642] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:57,642] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:57,642] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:57,648] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,656] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,656] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,660] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,661] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,667] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_RiPPM_norm.bw [2024-01-05 01:56:57,668] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_hist.pdf [2024-01-05 01:56:57,674] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_metrics [2024-01-05 01:56:57,677] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_metrics [2024-01-05 01:56:57,704] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-1-removed.bed [2024-01-05 01:56:57,735] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8-W400-normalized.wig [2024-01-05 01:56:57,739] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8-W400-normalized.wig [2024-01-05 01:56:57,739] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8-W400-normalized.wig [2024-01-05 01:56:57,747] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8-W400-normalized.wig [2024-01-05 01:56:57,891] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8-W400-normalized.wig [2024-01-05 01:56:57,923] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:57,927] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:57,927] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:57,934] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:58,077] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:58,089] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:56:58,097] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland [2024-01-05 01:56:58,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland [2024-01-05 01:56:58,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland [2024-01-05 01:56:58,108] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland [2024-01-05 01:56:58,157] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland [2024-01-05 01:56:58,209] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8-W400.graph [2024-01-05 01:56:58,214] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8-W400.graph [2024-01-05 01:56:58,214] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8-W400.graph [2024-01-05 01:56:58,221] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8-W400.graph [2024-01-05 01:56:58,222] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8-W400.graph [2024-01-05 01:56:58,430] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8-W400.graph [2024-01-05 01:56:58,464] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_read_SICER.out1 [2024-01-05 01:56:58,469] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_read_SICER.out1 [2024-01-05 01:56:58,469] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_read_SICER.out1 [2024-01-05 01:56:58,476] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_read_SICER.out1 [2024-01-05 01:56:58,534] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_read_SICER.out1 [2024-01-05 01:56:58,569] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:58,572] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:58,572] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:58,577] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:58,587] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8-W400-G2400-E100.scoreisland.bb [2024-01-05 01:56:58,588] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:56:58,589] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:58,589] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:56:58,595] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:58,598] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:58,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:56:58,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:58,612] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:56:58,617] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:56:58,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:56:58,649] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_sorted_mapped.bam [2024-01-05 01:56:58,649] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_alignments.bam.bai [2024-01-05 01:56:58,650] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_sorted_mapped.bam.bai [2024-01-05 01:56:58,653] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_alignments.bam [2024-01-05 01:56:58,659] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:56:58,661] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:56:58,662] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:56:58,678] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:56:58,680] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:56:58,854] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:56:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_filtered_StrgtPks_sorted.bam [2024-01-05 01:56:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_StrgtPks_tab.bed [2024-01-05 01:56:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_filtered_StrgtPks.bam.bai [2024-01-05 01:56:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_StrgtPksRm_tab.bed [2024-01-05 01:56:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_filtered_StrgtPks.bam [2024-01-05 01:56:58,860] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:56:58,861] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_summits.bed [2024-01-05 01:56:58,862] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:56:58,888] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:58,893] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:58,893] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:58,900] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:58,900] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:58,972] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak [2024-01-05 01:56:58,981] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:58,984] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:58,984] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:58,990] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:58,998] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:56:59,118] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:59,122] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:59,123] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:59,130] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:59,130] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:59,202] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:56:59,211] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:59,214] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:59,215] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:59,220] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:59,229] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:56:59,237] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_read_MACS2_peaks.out1 [2024-01-05 01:56:59,240] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_read_MACS2_peaks.out1 [2024-01-05 01:56:59,241] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_read_MACS2_peaks.out1 [2024-01-05 01:56:59,247] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_read_MACS2_peaks.out1 [2024-01-05 01:56:59,247] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_read_MACS2_peaks.out1 [2024-01-05 01:56:59,315] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_read_MACS2_peaks.out1 [2024-01-05 01:56:59,320] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:56:59,349] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:59,353] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:59,353] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:59,360] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:59,361] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:59,433] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_broad_MACS2_peaks.gappedPeak [2024-01-05 01:56:59,438] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:56:59,438] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:56:59,444] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:59,447] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:56:59,465] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:56:59,465] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:56:59,465] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:56:59,466] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:56:59,472] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,476] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,482] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,482] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,482] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,482] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,483] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,483] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,483] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,483] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,488] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,496] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_RiPPM_norm.bw [2024-01-05 01:56:59,503] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_metrics [2024-01-05 01:56:59,507] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_metrics [2024-01-05 01:56:59,526] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_hist.pdf [2024-01-05 01:56:59,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46-W400-normalized.wig [2024-01-05 01:56:59,557] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46-W400-normalized.wig [2024-01-05 01:56:59,558] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46-W400-normalized.wig [2024-01-05 01:56:59,565] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46-W400-normalized.wig [2024-01-05 01:56:59,714] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46-W400-normalized.wig [2024-01-05 01:56:59,723] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-1-removed.bed [2024-01-05 01:56:59,730] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland [2024-01-05 01:56:59,733] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland [2024-01-05 01:56:59,733] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland [2024-01-05 01:56:59,739] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland [2024-01-05 01:56:59,787] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland [2024-01-05 01:56:59,835] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:59,839] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:59,840] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:59,848] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:56:59,989] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:00,005] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,008] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,008] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,014] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,028] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,048] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46-W400.graph [2024-01-05 01:57:00,052] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46-W400.graph [2024-01-05 01:57:00,053] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46-W400.graph [2024-01-05 01:57:00,059] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46-W400.graph [2024-01-05 01:57:00,060] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46-W400.graph [2024-01-05 01:57:00,270] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46-W400.graph [2024-01-05 01:57:00,284] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_read_SICER.out1 [2024-01-05 01:57:00,286] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_read_SICER.out1 [2024-01-05 01:57:00,286] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_read_SICER.out1 [2024-01-05 01:57:00,293] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_read_SICER.out1 [2024-01-05 01:57:00,357] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_read_SICER.out1 [2024-01-05 01:57:00,361] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:00,362] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:00,362] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:00,368] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:00,371] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:00,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:00,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:00,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:00,390] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:00,395] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:00,398] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:00,398] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_alignments.bam [2024-01-05 01:57:00,422] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_sorted_mapped.bam.bai [2024-01-05 01:57:00,422] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_alignments.bam.bai [2024-01-05 01:57:00,422] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_sorted_mapped.bam [2024-01-05 01:57:00,429] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:00,433] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:00,434] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:00,438] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:00,439] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:00,609] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:00,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:00,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_StrgtPks_tab.bed [2024-01-05 01:57:00,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_filtered_StrgtPks.bam [2024-01-05 01:57:00,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:00,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_filtered_StrgtPks.bam.bai [2024-01-05 01:57:00,615] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_StrgtPksRm_tab.bed [2024-01-05 01:57:00,659] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland [2024-01-05 01:57:00,663] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland [2024-01-05 01:57:00,663] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland [2024-01-05 01:57:00,674] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland [2024-01-05 01:57:00,725] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland [2024-01-05 01:57:00,752] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35-W400-normalized.wig [2024-01-05 01:57:00,756] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35-W400-normalized.wig [2024-01-05 01:57:00,757] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35-W400-normalized.wig [2024-01-05 01:57:00,764] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35-W400-normalized.wig [2024-01-05 01:57:00,914] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35-W400-normalized.wig [2024-01-05 01:57:00,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,931] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,931] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,946] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:00,975] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:00,976] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-1-removed.bed [2024-01-05 01:57:01,014] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_read_SICER.out1 [2024-01-05 01:57:01,017] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_read_SICER.out1 [2024-01-05 01:57:01,017] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_read_SICER.out1 [2024-01-05 01:57:01,023] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_read_SICER.out1 [2024-01-05 01:57:01,079] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_read_SICER.out1 [2024-01-05 01:57:01,110] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35-W400.graph [2024-01-05 01:57:01,114] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35-W400.graph [2024-01-05 01:57:01,115] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35-W400.graph [2024-01-05 01:57:01,121] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35-W400.graph [2024-01-05 01:57:01,122] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35-W400.graph [2024-01-05 01:57:01,271] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35-W400.graph [2024-01-05 01:57:01,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:01,311] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:01,317] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:01,326] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:01,473] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:01,482] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:01,488] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:01,491] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:01,505] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:01,505] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:01,506] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:01,506] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:01,506] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:01,518] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_read_MACS2_peaks.out1 [2024-01-05 01:57:01,521] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_read_MACS2_peaks.out1 [2024-01-05 01:57:01,521] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_read_MACS2_peaks.out1 [2024-01-05 01:57:01,532] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_read_MACS2_peaks.out1 [2024-01-05 01:57:01,532] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_read_MACS2_peaks.out1 [2024-01-05 01:57:01,596] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_read_MACS2_peaks.out1 [2024-01-05 01:57:01,608] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:01,611] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:01,612] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:01,617] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:01,625] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:01,636] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:01,647] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:01,651] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:01,651] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:01,657] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:01,665] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:01,672] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_summits.bed [2024-01-05 01:57:01,742] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:01,746] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:01,747] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:01,754] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:01,755] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:01,821] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:01,855] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:01,860] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:01,860] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:01,867] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:01,867] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:01,938] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:01,971] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:01,974] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:01,975] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:01,981] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:01,981] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:02,051] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:02,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:02,065] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:02,066] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:02,068] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:02,070] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:02,139] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:02,185] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:02,221] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:02,222] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:02,240] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,243] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,243] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,248] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,248] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,249] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,256] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_RiPPM_norm.bw [2024-01-05 01:57:02,257] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_hist.pdf [2024-01-05 01:57:02,264] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_metrics [2024-01-05 01:57:02,272] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_metrics [2024-01-05 01:57:02,299] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:02,302] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:02,331] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_sorted_mapped.bam [2024-01-05 01:57:02,331] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_sorted_mapped.bam.bai [2024-01-05 01:57:02,331] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_alignments.bam.bai [2024-01-05 01:57:02,331] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_alignments.bam [2024-01-05 01:57:02,333] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:02,339] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:02,342] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:02,342] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:02,348] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:02,356] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:02,386] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24-W400.graph [2024-01-05 01:57:02,390] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24-W400.graph [2024-01-05 01:57:02,391] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24-W400.graph [2024-01-05 01:57:02,398] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24-W400.graph [2024-01-05 01:57:02,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24-W400.graph [2024-01-05 01:57:02,560] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24-W400.graph [2024-01-05 01:57:02,652] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24-W400-normalized.wig [2024-01-05 01:57:02,656] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24-W400-normalized.wig [2024-01-05 01:57:02,657] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24-W400-normalized.wig [2024-01-05 01:57:02,663] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24-W400-normalized.wig [2024-01-05 01:57:02,809] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24-W400-normalized.wig [2024-01-05 01:57:02,936] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:02,941] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:02,942] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:02,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:03,085] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:03,102] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_read_SICER.out1 [2024-01-05 01:57:03,104] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_read_SICER.out1 [2024-01-05 01:57:03,105] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_read_SICER.out1 [2024-01-05 01:57:03,111] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_read_SICER.out1 [2024-01-05 01:57:03,178] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_read_SICER.out1 [2024-01-05 01:57:03,205] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-1-removed.bed [2024-01-05 01:57:03,244] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland [2024-01-05 01:57:03,248] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland [2024-01-05 01:57:03,249] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland [2024-01-05 01:57:03,256] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland [2024-01-05 01:57:03,312] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24-W400-G2400-E100.scoreisland [2024-01-05 01:57:03,316] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:03,317] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:03,317] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:03,317] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:03,323] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:03,327] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:03,350] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:03,350] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:03,357] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:03,360] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:03,361] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:03,367] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:03,368] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:03,462] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:03,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:03,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:03,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_StrgtPksRm_tab.bed [2024-01-05 01:57:03,470] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_filtered_StrgtPks.bam.bai [2024-01-05 01:57:03,471] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_StrgtPks_tab.bed [2024-01-05 01:57:03,471] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_filtered_StrgtPks.bam [2024-01-05 01:57:03,476] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,479] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,479] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,485] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,486] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,494] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_RiPPM_norm.bw [2024-01-05 01:57:03,501] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_metrics [2024-01-05 01:57:03,505] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_metrics [2024-01-05 01:57:03,527] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_hist.pdf [2024-01-05 01:57:03,560] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:03,565] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:03,566] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:03,572] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:03,572] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:03,639] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:03,644] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:03,646] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:03,662] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:03,664] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:03,665] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:03,670] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:03,677] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:03,709] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_summits.bed [2024-01-05 01:57:03,715] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:03,718] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:03,719] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:03,724] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:03,732] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:03,756] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:03,760] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:03,760] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:03,771] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:03,772] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:03,836] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:03,882] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_read_MACS2_peaks.out1 [2024-01-05 01:57:03,886] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_read_MACS2_peaks.out1 [2024-01-05 01:57:03,887] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_read_MACS2_peaks.out1 [2024-01-05 01:57:03,894] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_read_MACS2_peaks.out1 [2024-01-05 01:57:03,894] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_read_MACS2_peaks.out1 [2024-01-05 01:57:03,957] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_read_MACS2_peaks.out1 [2024-01-05 01:57:03,987] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:03,992] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:03,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:03,998] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:03,999] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,064] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,068] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:04,074] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:04,077] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:04,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:04,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:04,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:04,106] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:04,107] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:04,112] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:04,115] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:04,115] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_alignments.bam [2024-01-05 01:57:04,116] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_sorted_mapped.bam [2024-01-05 01:57:04,119] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_alignments.bam.bai [2024-01-05 01:57:04,143] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_sorted_mapped.bam.bai [2024-01-05 01:57:04,148] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:04,152] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:04,153] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:04,158] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:04,158] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:04,257] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:04,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_StrgtPksRm_tab.bed [2024-01-05 01:57:04,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:04,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_filtered_StrgtPks.bam.bai [2024-01-05 01:57:04,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_StrgtPks_tab.bed [2024-01-05 01:57:04,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:04,263] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_filtered_StrgtPks.bam [2024-01-05 01:57:04,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_read_MACS2_peaks.out1 [2024-01-05 01:57:04,312] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_read_MACS2_peaks.out1 [2024-01-05 01:57:04,312] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_read_MACS2_peaks.out1 [2024-01-05 01:57:04,319] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_read_MACS2_peaks.out1 [2024-01-05 01:57:04,319] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_read_MACS2_peaks.out1 [2024-01-05 01:57:04,384] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_read_MACS2_peaks.out1 [2024-01-05 01:57:04,482] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,487] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,487] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,493] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,494] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,571] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:04,576] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_summits.bed [2024-01-05 01:57:04,578] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:04,603] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:04,620] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:04,625] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:04,625] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:04,631] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:04,639] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:04,669] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:04,673] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:04,673] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:04,681] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:04,681] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:04,757] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:04,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:04,775] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:04,776] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:04,781] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:04,789] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:04,814] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:04,819] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:04,819] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:04,825] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:04,826] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:04,900] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:04,906] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:04,913] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:04,918] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:04,942] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:04,942] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:04,942] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:04,943] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:04,943] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:04,948] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,951] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,951] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,957] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,957] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,957] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,957] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,957] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,958] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,958] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,958] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,958] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,965] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_RiPPM_norm.bw [2024-01-05 01:57:04,966] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_hist.pdf [2024-01-05 01:57:04,972] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_metrics [2024-01-05 01:57:04,976] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_metrics [2024-01-05 01:57:05,009] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_read_SICER.out1 [2024-01-05 01:57:05,012] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_read_SICER.out1 [2024-01-05 01:57:05,012] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_read_SICER.out1 [2024-01-05 01:57:05,018] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_read_SICER.out1 [2024-01-05 01:57:05,073] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_read_SICER.out1 [2024-01-05 01:57:05,079] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-1-removed.bed [2024-01-05 01:57:05,112] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland [2024-01-05 01:57:05,115] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland [2024-01-05 01:57:05,115] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland [2024-01-05 01:57:05,120] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland [2024-01-05 01:57:05,178] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland [2024-01-05 01:57:05,203] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13-W400.graph [2024-01-05 01:57:05,207] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13-W400.graph [2024-01-05 01:57:05,207] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13-W400.graph [2024-01-05 01:57:05,214] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13-W400.graph [2024-01-05 01:57:05,215] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13-W400.graph [2024-01-05 01:57:05,355] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13-W400.graph [2024-01-05 01:57:05,389] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13-W400-normalized.wig [2024-01-05 01:57:05,393] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13-W400-normalized.wig [2024-01-05 01:57:05,394] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13-W400-normalized.wig [2024-01-05 01:57:05,401] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13-W400-normalized.wig [2024-01-05 01:57:05,541] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13-W400-normalized.wig [2024-01-05 01:57:05,566] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:05,569] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:05,570] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:05,577] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:05,719] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:05,729] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:05,735] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:05,738] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:05,738] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:05,743] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:05,751] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:05,752] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:05,753] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:05,759] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:05,762] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:05,776] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:05,776] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:05,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:05,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:05,782] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:05,785] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:05,785] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_sorted_mapped.bam.bai [2024-01-05 01:57:05,785] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_sorted_mapped.bam [2024-01-05 01:57:05,788] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_alignments.bam.bai [2024-01-05 01:57:05,817] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_fragments.bed [2024-01-05 01:57:05,817] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_alignments.bam [2024-01-05 01:57:05,823] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:05,826] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:05,826] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:05,832] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:05,833] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:05,929] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:05,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_filtered_StrgtPks.bam.bai [2024-01-05 01:57:05,934] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_filtered_StrgtPks.bam [2024-01-05 01:57:05,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_StrgtPksRm_tab.bed [2024-01-05 01:57:05,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:05,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:05,935] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_StrgtPks_tab.bed [2024-01-05 01:57:05,940] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,948] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,948] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,949] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,949] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,949] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,949] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,956] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_RiPPM_norm.bw [2024-01-05 01:57:05,957] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_hist.pdf [2024-01-05 01:57:05,964] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_metrics [2024-01-05 01:57:05,968] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_metrics [2024-01-05 01:57:05,994] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:05,998] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:05,998] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:06,003] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:06,018] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:06,095] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:06,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:06,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:06,106] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:06,106] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:06,178] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:06,182] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:06,234] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_read_MACS2_peaks.out1 [2024-01-05 01:57:06,239] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_read_MACS2_peaks.out1 [2024-01-05 01:57:06,240] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_read_MACS2_peaks.out1 [2024-01-05 01:57:06,247] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_read_MACS2_peaks.out1 [2024-01-05 01:57:06,248] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_read_MACS2_peaks.out1 [2024-01-05 01:57:06,312] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_read_MACS2_peaks.out1 [2024-01-05 01:57:06,321] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_summits.bed [2024-01-05 01:57:06,323] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:06,361] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:06,365] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:06,366] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:06,372] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:06,372] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:06,442] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:06,472] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:06,477] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:06,477] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:06,484] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:06,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:06,558] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:06,570] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:06,572] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:06,573] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:06,577] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:06,585] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:06,586] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:06,586] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:06,586] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:06,592] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:06,595] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:06,619] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:06,619] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:06,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:06,639] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:06,644] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:06,644] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:06,657] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:06,788] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:06,799] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:06,881] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1-W400.graph [2024-01-05 01:57:06,919] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1-W400.graph [2024-01-05 01:57:06,923] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1-W400.graph [2024-01-05 01:57:06,990] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1-W400.graph [2024-01-05 01:57:06,992] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1-W400.graph [2024-01-05 01:57:07,250] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1-W400.graph [2024-01-05 01:57:07,265] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:07,271] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:07,272] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:07,277] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:07,284] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:07,350] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_read_SICER.out1 [2024-01-05 01:57:07,355] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_read_SICER.out1 [2024-01-05 01:57:07,355] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_read_SICER.out1 [2024-01-05 01:57:07,362] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_read_SICER.out1 [2024-01-05 01:57:07,422] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_read_SICER.out1 [2024-01-05 01:57:07,426] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-1-removed.bed [2024-01-05 01:57:07,470] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland [2024-01-05 01:57:07,475] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland [2024-01-05 01:57:07,475] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland [2024-01-05 01:57:07,482] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland [2024-01-05 01:57:07,539] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1-W400-G2400-E100.scoreisland [2024-01-05 01:57:07,566] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1-W400-normalized.wig [2024-01-05 01:57:07,570] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1-W400-normalized.wig [2024-01-05 01:57:07,570] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1-W400-normalized.wig [2024-01-05 01:57:07,578] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1-W400-normalized.wig [2024-01-05 01:57:07,710] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1-W400-normalized.wig [2024-01-05 01:57:07,717] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:07,722] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:07,723] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:07,730] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:07,735] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:07,752] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:07,753] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:07,753] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:07,758] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:07,761] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:07,764] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_alignments.bam.bai [2024-01-05 01:57:07,764] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_alignments.bam [2024-01-05 01:57:07,765] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_sorted_mapped.bam [2024-01-05 01:57:07,765] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_sorted_mapped.bam.bai [2024-01-05 01:57:07,796] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:07,799] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:07,800] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:07,806] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:07,806] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:07,904] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:07,909] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_StrgtPks_tab.bed [2024-01-05 01:57:07,909] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_filtered_StrgtPks.bam [2024-01-05 01:57:07,910] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:07,910] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_StrgtPksRm_tab.bed [2024-01-05 01:57:07,910] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:07,910] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_filtered_StrgtPks.bam.bai [2024-01-05 01:57:07,917] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:07,919] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:07,920] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:07,924] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:07,937] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:07,976] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_read_MACS2_peaks.out1 [2024-01-05 01:57:08,005] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_read_MACS2_peaks.out1 [2024-01-05 01:57:08,010] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_read_MACS2_peaks.out1 [2024-01-05 01:57:08,088] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_read_MACS2_peaks.out1 [2024-01-05 01:57:08,090] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_read_MACS2_peaks.out1 [2024-01-05 01:57:08,310] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_read_MACS2_peaks.out1 [2024-01-05 01:57:08,387] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:08,391] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:08,392] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:08,398] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:08,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:08,471] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:08,480] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:08,483] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:08,483] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:08,488] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:08,497] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:08,559] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:08,563] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:08,564] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:08,576] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:08,576] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:08,651] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:08,680] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:08,710] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:08,714] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:08,715] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:08,721] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:08,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:08,792] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:08,800] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_summits.bed [2024-01-05 01:57:08,827] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:08,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:08,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:08,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:08,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:08,835] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:08,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:08,853] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:08,854] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:08,861] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,864] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,865] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,870] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,871] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,878] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_RiPPM_norm.bw [2024-01-05 01:57:08,886] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_metrics [2024-01-05 01:57:08,890] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_metrics [2024-01-05 01:57:08,919] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_hist.pdf [2024-01-05 01:57:08,920] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:08,927] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:08,930] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:08,930] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:08,935] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:08,944] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:08,976] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:08,980] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:08,980] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:08,986] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:09,129] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:09,172] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44-W400-normalized.wig [2024-01-05 01:57:09,176] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44-W400-normalized.wig [2024-01-05 01:57:09,177] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44-W400-normalized.wig [2024-01-05 01:57:09,184] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44-W400-normalized.wig [2024-01-05 01:57:09,320] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44-W400-normalized.wig [2024-01-05 01:57:09,408] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44-W400.graph [2024-01-05 01:57:09,412] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44-W400.graph [2024-01-05 01:57:09,413] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44-W400.graph [2024-01-05 01:57:09,419] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44-W400.graph [2024-01-05 01:57:09,419] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44-W400.graph [2024-01-05 01:57:09,563] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44-W400.graph [2024-01-05 01:57:09,579] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland [2024-01-05 01:57:09,582] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland [2024-01-05 01:57:09,582] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland [2024-01-05 01:57:09,588] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland [2024-01-05 01:57:09,641] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44-W400-G2400-E100.scoreisland [2024-01-05 01:57:09,669] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-1-removed.bed [2024-01-05 01:57:09,680] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_read_SICER.out1 [2024-01-05 01:57:09,683] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_read_SICER.out1 [2024-01-05 01:57:09,684] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_read_SICER.out1 [2024-01-05 01:57:09,689] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_read_SICER.out1 [2024-01-05 01:57:09,743] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_read_SICER.out1 [2024-01-05 01:57:09,746] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:09,747] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:09,753] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:09,757] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:09,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:09,778] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:09,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:09,779] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:09,784] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:09,787] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:09,787] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_alignments.bam [2024-01-05 01:57:09,790] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_sorted_mapped.bam.bai [2024-01-05 01:57:09,790] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_sorted_mapped.bam [2024-01-05 01:57:09,820] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_alignments.bam.bai [2024-01-05 01:57:09,821] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:09,847] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:09,884] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:09,889] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:09,889] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:09,895] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:09,895] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:09,960] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:09,976] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_summits.bed [2024-01-05 01:57:09,990] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:09,993] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:09,993] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:09,999] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:10,007] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:10,045] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:10,050] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:10,051] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:10,057] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:10,057] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:10,132] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:10,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:10,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:10,222] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:10,229] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:10,229] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:10,301] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:10,310] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:10,312] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:10,313] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:10,319] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:10,329] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:10,367] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_read_MACS2_peaks.out1 [2024-01-05 01:57:10,370] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_read_MACS2_peaks.out1 [2024-01-05 01:57:10,371] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_read_MACS2_peaks.out1 [2024-01-05 01:57:10,378] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_read_MACS2_peaks.out1 [2024-01-05 01:57:10,378] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_read_MACS2_peaks.out1 [2024-01-05 01:57:10,450] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_read_MACS2_peaks.out1 [2024-01-05 01:57:10,457] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:10,463] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:10,467] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:10,482] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:10,482] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:10,482] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:10,483] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:10,483] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:10,489] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:10,491] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:10,492] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:10,498] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:10,498] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:10,594] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:10,598] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:10,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_StrgtPks_tab.bed [2024-01-05 01:57:10,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_filtered_StrgtPks.bam.bai [2024-01-05 01:57:10,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:10,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_filtered_StrgtPks.bam [2024-01-05 01:57:10,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_StrgtPksRm_tab.bed [2024-01-05 01:57:10,605] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,607] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,608] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,618] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,618] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,618] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,619] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,619] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,619] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,619] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,619] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,619] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,627] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_RiPPM_norm.bw [2024-01-05 01:57:10,629] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_hist.pdf [2024-01-05 01:57:10,636] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_metrics [2024-01-05 01:57:10,639] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_metrics [2024-01-05 01:57:10,660] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:10,662] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:10,663] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:10,669] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:10,677] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:10,697] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33-W400.graph [2024-01-05 01:57:10,700] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33-W400.graph [2024-01-05 01:57:10,701] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33-W400.graph [2024-01-05 01:57:10,708] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33-W400.graph [2024-01-05 01:57:10,708] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33-W400.graph [2024-01-05 01:57:10,856] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33-W400.graph [2024-01-05 01:57:10,888] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-1-removed.bed [2024-01-05 01:57:10,910] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33-W400-normalized.wig [2024-01-05 01:57:10,914] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33-W400-normalized.wig [2024-01-05 01:57:10,914] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33-W400-normalized.wig [2024-01-05 01:57:10,921] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33-W400-normalized.wig [2024-01-05 01:57:11,064] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33-W400-normalized.wig [2024-01-05 01:57:11,079] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland [2024-01-05 01:57:11,081] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland [2024-01-05 01:57:11,082] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland [2024-01-05 01:57:11,087] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland [2024-01-05 01:57:11,139] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100.scoreisland [2024-01-05 01:57:11,174] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:11,217] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:11,222] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:11,222] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:11,228] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:11,376] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:11,392] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_read_SICER.out1 [2024-01-05 01:57:11,395] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_read_SICER.out1 [2024-01-05 01:57:11,396] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_read_SICER.out1 [2024-01-05 01:57:11,405] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_read_SICER.out1 [2024-01-05 01:57:11,474] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_read_SICER.out1 [2024-01-05 01:57:11,477] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:11,482] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:11,483] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:11,488] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:11,491] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:11,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:11,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:11,511] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:11,516] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:11,519] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:11,519] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_sorted_mapped.bam [2024-01-05 01:57:11,522] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_sorted_mapped.bam.bai [2024-01-05 01:57:11,522] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_alignments.bam.bai [2024-01-05 01:57:11,548] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_alignments.bam [2024-01-05 01:57:11,553] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:11,555] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:11,556] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:11,563] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:11,563] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:11,663] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:11,669] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:11,669] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_filtered_StrgtPks.bam.bai [2024-01-05 01:57:11,669] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_StrgtPks_tab.bed [2024-01-05 01:57:11,669] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:11,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_filtered_StrgtPks.bam [2024-01-05 01:57:11,670] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_StrgtPksRm_tab.bed [2024-01-05 01:57:11,690] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22-W400-normalized.wig [2024-01-05 01:57:11,700] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22-W400-normalized.wig [2024-01-05 01:57:11,701] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22-W400-normalized.wig [2024-01-05 01:57:11,709] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22-W400-normalized.wig [2024-01-05 01:57:11,826] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22-W400-normalized.wig [2024-01-05 01:57:11,855] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_read_SICER.out1 [2024-01-05 01:57:11,859] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_read_SICER.out1 [2024-01-05 01:57:11,860] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_read_SICER.out1 [2024-01-05 01:57:11,867] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_read_SICER.out1 [2024-01-05 01:57:11,924] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_read_SICER.out1 [2024-01-05 01:57:11,955] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22-W400.graph [2024-01-05 01:57:11,959] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22-W400.graph [2024-01-05 01:57:11,959] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22-W400.graph [2024-01-05 01:57:11,965] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22-W400.graph [2024-01-05 01:57:11,966] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22-W400.graph [2024-01-05 01:57:12,081] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22-W400.graph [2024-01-05 01:57:12,144] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:12,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:12,149] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:12,156] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:12,262] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:12,268] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:12,304] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland [2024-01-05 01:57:12,308] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland [2024-01-05 01:57:12,309] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland [2024-01-05 01:57:12,316] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland [2024-01-05 01:57:12,372] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland [2024-01-05 01:57:12,401] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-1-removed.bed [2024-01-05 01:57:12,412] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:12,415] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:12,415] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:12,420] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:12,429] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:12,430] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:12,430] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:12,437] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:12,440] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:12,466] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:12,466] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:12,467] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:12,467] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:12,473] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_RiPPM_norm.bw [2024-01-05 01:57:12,476] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_RiPPM_norm.bw [2024-01-05 01:57:12,476] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_RiPPM_norm.bw [2024-01-05 01:57:12,482] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_RiPPM_norm.bw [2024-01-05 01:57:12,482] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_RiPPM_norm.bw [2024-01-05 01:57:12,490] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_RiPPM_norm.bw [2024-01-05 01:57:12,497] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_metrics [2024-01-05 01:57:12,500] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_metrics [2024-01-05 01:57:12,520] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_hist.pdf [2024-01-05 01:57:12,527] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:12,530] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:12,531] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:12,537] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:12,545] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:12,547] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_summits.bed [2024-01-05 01:57:12,561] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_read_MACS2_peaks.out1 [2024-01-05 01:57:12,564] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_read_MACS2_peaks.out1 [2024-01-05 01:57:12,564] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_read_MACS2_peaks.out1 [2024-01-05 01:57:12,569] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_read_MACS2_peaks.out1 [2024-01-05 01:57:12,569] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_read_MACS2_peaks.out1 [2024-01-05 01:57:12,633] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_read_MACS2_peaks.out1 [2024-01-05 01:57:12,661] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:12,738] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:12,742] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:12,743] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:12,750] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:12,750] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:12,820] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:12,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:12,835] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:12,838] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:12,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:12,844] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:12,852] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:12,883] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:12,887] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:12,888] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:12,893] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:12,894] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:12,953] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:13,005] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:13,009] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:13,009] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:13,015] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:13,015] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:13,179] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:13,493] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:13,493] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:13,494] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:13,504] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:13,512] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:13,530] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:13,530] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:13,530] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:13,607] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: index [2024-01-05 01:57:13,612] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: index [2024-01-05 01:57:13,612] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: index [2024-01-05 01:57:13,624] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: index [2024-01-05 01:57:13,631] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: index [2024-01-05 01:57:13,790] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2024-01-05 01:57:13,795] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2024-01-05 01:57:13,795] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2024-01-05 01:57:13,801] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2024-01-05 01:57:13,817] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: fsmonitor-watchman.sample [2024-01-05 01:57:13,823] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pre-commit.sample [2024-01-05 01:57:13,831] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pre-commit.sample [2024-01-05 01:57:13,858] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: update.sample [2024-01-05 01:57:13,861] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: update.sample [2024-01-05 01:57:13,867] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: update.sample [2024-01-05 01:57:13,885] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: push-to-checkout.sample [2024-01-05 01:57:13,889] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: push-to-checkout.sample [2024-01-05 01:57:13,894] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: push-to-checkout.sample [2024-01-05 01:57:13,942] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pre-push.sample [2024-01-05 01:57:13,945] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pre-push.sample [2024-01-05 01:57:14,012] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pre-rebase.sample [2024-01-05 01:57:14,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: pre-rebase.sample [2024-01-05 01:57:14,017] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pre-rebase.sample [2024-01-05 01:57:14,023] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: pre-rebase.sample [2024-01-05 01:57:14,035] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: pre-rebase.sample [2024-01-05 01:57:14,048] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: prepare-commit-msg.sample [2024-01-05 01:57:14,051] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: prepare-commit-msg.sample [2024-01-05 01:57:14,391] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,428] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,431] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,498] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,498] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,500] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by snpeff because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,501] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,596] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.pack [2024-01-05 01:57:14,689] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.idx [2024-01-05 01:57:14,723] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.idx [2024-01-05 01:57:14,726] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.idx [2024-01-05 01:57:14,756] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.idx [2024-01-05 01:57:14,767] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: pack-92a983a1c8e42e97e7512cf0664364d765f8bc1a.idx [2024-01-05 01:57:14,807] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:14,810] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:14,811] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:14,816] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:14,829] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:14,836] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_diffReps.sh [2024-01-05 01:57:14,839] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_diffReps.sh [2024-01-05 01:57:14,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_diffReps.sh [2024-01-05 01:57:14,845] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_diffReps.sh [2024-01-05 01:57:14,854] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_diffReps.sh [2024-01-05 01:57:14,861] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:14,864] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:14,869] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:14,889] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffReps.qsub [2024-01-05 01:57:14,891] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffReps.qsub [2024-01-05 01:57:14,891] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffReps.qsub [2024-01-05 01:57:14,898] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffReps.qsub [2024-01-05 01:57:14,927] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffReps.qsub [2024-01-05 01:57:14,934] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffreps_genomicRanges.R [2024-01-05 01:57:14,937] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: diffreps_genomicRanges.R [2024-01-05 01:57:14,937] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffreps_genomicRanges.R [2024-01-05 01:57:14,943] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffreps_genomicRanges.R [2024-01-05 01:57:14,974] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: diffreps_genomicRanges.R [2024-01-05 01:57:15,022] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:15,027] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:15,033] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:15,052] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M17.o3475636 [2024-01-05 01:57:15,054] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M17.o3475636 [2024-01-05 01:57:15,054] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M17.o3475636 [2024-01-05 01:57:15,062] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M17.o3475636 [2024-01-05 01:57:15,077] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M17.o3475636 [2024-01-05 01:57:15,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M40.o3475661 [2024-01-05 01:57:15,088] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M40.o3475661 [2024-01-05 01:57:15,088] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M40.o3475661 [2024-01-05 01:57:15,099] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M40.o3475661 [2024-01-05 01:57:15,113] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M40.o3475661 [2024-01-05 01:57:15,120] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M5.o3475624 [2024-01-05 01:57:15,123] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M5.o3475624 [2024-01-05 01:57:15,123] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M5.o3475624 [2024-01-05 01:57:15,128] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M5.o3475624 [2024-01-05 01:57:15,139] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M5.o3475624 [2024-01-05 01:57:15,146] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M31.o3475652 [2024-01-05 01:57:15,149] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M31.o3475652 [2024-01-05 01:57:15,149] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M31.o3475652 [2024-01-05 01:57:15,154] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M31.o3475652 [2024-01-05 01:57:15,170] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M31.o3475652 [2024-01-05 01:57:15,178] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M45.o3475666 [2024-01-05 01:57:15,181] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M45.o3475666 [2024-01-05 01:57:15,182] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M45.o3475666 [2024-01-05 01:57:15,188] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M45.o3475666 [2024-01-05 01:57:15,209] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M45.o3475666 [2024-01-05 01:57:15,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M1.o3475620 [2024-01-05 01:57:15,219] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M1.o3475620 [2024-01-05 01:57:15,219] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M1.o3475620 [2024-01-05 01:57:15,224] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M1.o3475620 [2024-01-05 01:57:15,237] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M1.o3475620 [2024-01-05 01:57:15,244] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M38.o3475659 [2024-01-05 01:57:15,247] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M38.o3475659 [2024-01-05 01:57:15,247] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M38.o3475659 [2024-01-05 01:57:15,252] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M38.o3475659 [2024-01-05 01:57:15,267] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M38.o3475659 [2024-01-05 01:57:15,275] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M28.o3475648 [2024-01-05 01:57:15,277] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M28.o3475648 [2024-01-05 01:57:15,277] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M28.o3475648 [2024-01-05 01:57:15,283] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M28.o3475648 [2024-01-05 01:57:15,299] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M28.o3475648 [2024-01-05 01:57:15,314] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M16.o3475635 [2024-01-05 01:57:15,318] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M16.o3475635 [2024-01-05 01:57:15,318] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M16.o3475635 [2024-01-05 01:57:15,325] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M16.o3475635 [2024-01-05 01:57:15,341] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M16.o3475635 [2024-01-05 01:57:15,348] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M33.o3475654 [2024-01-05 01:57:15,352] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M33.o3475654 [2024-01-05 01:57:15,352] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M33.o3475654 [2024-01-05 01:57:15,357] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M33.o3475654 [2024-01-05 01:57:15,373] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M33.o3475654 [2024-01-05 01:57:15,382] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M32.o3475653 [2024-01-05 01:57:15,385] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M32.o3475653 [2024-01-05 01:57:15,385] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M32.o3475653 [2024-01-05 01:57:15,391] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M32.o3475653 [2024-01-05 01:57:15,405] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M32.o3475653 [2024-01-05 01:57:15,417] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M41.o3475662 [2024-01-05 01:57:15,421] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M41.o3475662 [2024-01-05 01:57:15,421] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M41.o3475662 [2024-01-05 01:57:15,430] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M41.o3475662 [2024-01-05 01:57:15,446] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M41.o3475662 [2024-01-05 01:57:15,454] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M13.o3475632 [2024-01-05 01:57:15,458] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M13.o3475632 [2024-01-05 01:57:15,459] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M13.o3475632 [2024-01-05 01:57:15,466] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M13.o3475632 [2024-01-05 01:57:15,484] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M13.o3475632 [2024-01-05 01:57:15,491] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_FASTQC.sh [2024-01-05 01:57:15,493] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_FASTQC.sh [2024-01-05 01:57:15,498] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_FASTQC.sh [2024-01-05 01:57:15,514] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M34.o3475655 [2024-01-05 01:57:15,523] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M34.o3475655 [2024-01-05 01:57:15,523] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M34.o3475655 [2024-01-05 01:57:15,528] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M34.o3475655 [2024-01-05 01:57:15,543] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M34.o3475655 [2024-01-05 01:57:15,551] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M15.o3475634 [2024-01-05 01:57:15,554] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M15.o3475634 [2024-01-05 01:57:15,555] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M15.o3475634 [2024-01-05 01:57:15,560] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M15.o3475634 [2024-01-05 01:57:15,573] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M15.o3475634 [2024-01-05 01:57:15,582] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M35.o3475656 [2024-01-05 01:57:15,585] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M35.o3475656 [2024-01-05 01:57:15,585] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M35.o3475656 [2024-01-05 01:57:15,590] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M35.o3475656 [2024-01-05 01:57:15,602] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M35.o3475656 [2024-01-05 01:57:15,610] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M48.o3475669 [2024-01-05 01:57:15,612] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M48.o3475669 [2024-01-05 01:57:15,613] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M48.o3475669 [2024-01-05 01:57:15,619] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M48.o3475669 [2024-01-05 01:57:15,638] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M48.o3475669 [2024-01-05 01:57:15,646] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M9.o3475628 [2024-01-05 01:57:15,649] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M9.o3475628 [2024-01-05 01:57:15,649] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M9.o3475628 [2024-01-05 01:57:15,656] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M9.o3475628 [2024-01-05 01:57:15,668] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M9.o3475628 [2024-01-05 01:57:15,675] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M18.o3475637 [2024-01-05 01:57:15,678] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M18.o3475637 [2024-01-05 01:57:15,679] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M18.o3475637 [2024-01-05 01:57:15,684] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M18.o3475637 [2024-01-05 01:57:15,700] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M18.o3475637 [2024-01-05 01:57:15,707] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M36.o3475657 [2024-01-05 01:57:15,711] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M36.o3475657 [2024-01-05 01:57:15,711] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M36.o3475657 [2024-01-05 01:57:15,717] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M36.o3475657 [2024-01-05 01:57:15,738] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M36.o3475657 [2024-01-05 01:57:15,745] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M12.o3475631 [2024-01-05 01:57:15,748] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M12.o3475631 [2024-01-05 01:57:15,749] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M12.o3475631 [2024-01-05 01:57:15,754] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M12.o3475631 [2024-01-05 01:57:15,769] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M12.o3475631 [2024-01-05 01:57:15,776] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M21.o3475641 [2024-01-05 01:57:15,780] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M21.o3475641 [2024-01-05 01:57:15,780] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M21.o3475641 [2024-01-05 01:57:15,786] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M21.o3475641 [2024-01-05 01:57:15,800] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M21.o3475641 [2024-01-05 01:57:15,806] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M29.o3475650 [2024-01-05 01:57:15,809] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M29.o3475650 [2024-01-05 01:57:15,810] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M29.o3475650 [2024-01-05 01:57:15,815] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M29.o3475650 [2024-01-05 01:57:15,832] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M29.o3475650 [2024-01-05 01:57:15,846] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M19.o3475638 [2024-01-05 01:57:15,850] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M19.o3475638 [2024-01-05 01:57:15,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M19.o3475638 [2024-01-05 01:57:15,858] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M19.o3475638 [2024-01-05 01:57:15,874] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M19.o3475638 [2024-01-05 01:57:15,882] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M39.o3475660 [2024-01-05 01:57:15,884] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M39.o3475660 [2024-01-05 01:57:15,885] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M39.o3475660 [2024-01-05 01:57:15,891] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M39.o3475660 [2024-01-05 01:57:15,905] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M39.o3475660 [2024-01-05 01:57:15,914] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M14.o3475633 [2024-01-05 01:57:15,919] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M14.o3475633 [2024-01-05 01:57:15,919] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M14.o3475633 [2024-01-05 01:57:15,927] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M14.o3475633 [2024-01-05 01:57:15,948] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M14.o3475633 [2024-01-05 01:57:15,956] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M47.o3475668 [2024-01-05 01:57:15,959] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M47.o3475668 [2024-01-05 01:57:15,960] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M47.o3475668 [2024-01-05 01:57:15,965] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M47.o3475668 [2024-01-05 01:57:15,979] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M47.o3475668 [2024-01-05 01:57:15,984] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M2.o3475621 [2024-01-05 01:57:15,987] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M2.o3475621 [2024-01-05 01:57:15,987] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M2.o3475621 [2024-01-05 01:57:15,993] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M2.o3475621 [2024-01-05 01:57:16,005] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M2.o3475621 [2024-01-05 01:57:16,013] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M42.o3475663 [2024-01-05 01:57:16,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M42.o3475663 [2024-01-05 01:57:16,017] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M42.o3475663 [2024-01-05 01:57:16,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M42.o3475663 [2024-01-05 01:57:16,036] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M42.o3475663 [2024-01-05 01:57:16,045] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M8.o3475627 [2024-01-05 01:57:16,053] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M8.o3475627 [2024-01-05 01:57:16,053] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M8.o3475627 [2024-01-05 01:57:16,058] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M8.o3475627 [2024-01-05 01:57:16,072] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M8.o3475627 [2024-01-05 01:57:16,079] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M10.o3475629 [2024-01-05 01:57:16,082] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M10.o3475629 [2024-01-05 01:57:16,082] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M10.o3475629 [2024-01-05 01:57:16,088] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M10.o3475629 [2024-01-05 01:57:16,101] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M10.o3475629 [2024-01-05 01:57:16,108] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M22.o3475642 [2024-01-05 01:57:16,111] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M22.o3475642 [2024-01-05 01:57:16,111] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M22.o3475642 [2024-01-05 01:57:16,116] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M22.o3475642 [2024-01-05 01:57:16,133] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M22.o3475642 [2024-01-05 01:57:16,140] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M20.o3475640 [2024-01-05 01:57:16,143] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M20.o3475640 [2024-01-05 01:57:16,143] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M20.o3475640 [2024-01-05 01:57:16,148] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M20.o3475640 [2024-01-05 01:57:16,167] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M20.o3475640 [2024-01-05 01:57:16,176] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M49.o3475670 [2024-01-05 01:57:16,180] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M49.o3475670 [2024-01-05 01:57:16,180] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M49.o3475670 [2024-01-05 01:57:16,186] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M49.o3475670 [2024-01-05 01:57:16,202] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M49.o3475670 [2024-01-05 01:57:16,208] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M23.o3475643 [2024-01-05 01:57:16,211] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M23.o3475643 [2024-01-05 01:57:16,211] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M23.o3475643 [2024-01-05 01:57:16,217] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M23.o3475643 [2024-01-05 01:57:16,235] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M23.o3475643 [2024-01-05 01:57:16,243] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M26.o3475646 [2024-01-05 01:57:16,246] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M26.o3475646 [2024-01-05 01:57:16,246] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M26.o3475646 [2024-01-05 01:57:16,250] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M26.o3475646 [2024-01-05 01:57:16,272] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M26.o3475646 [2024-01-05 01:57:16,281] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M3.o3475622 [2024-01-05 01:57:16,284] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M3.o3475622 [2024-01-05 01:57:16,285] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M3.o3475622 [2024-01-05 01:57:16,291] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M3.o3475622 [2024-01-05 01:57:16,306] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M3.o3475622 [2024-01-05 01:57:16,319] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M44.o3475665 [2024-01-05 01:57:16,322] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M44.o3475665 [2024-01-05 01:57:16,323] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M44.o3475665 [2024-01-05 01:57:16,329] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M44.o3475665 [2024-01-05 01:57:16,341] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M44.o3475665 [2024-01-05 01:57:16,349] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:16,353] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:16,359] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:16,378] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:16,380] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:16,386] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:16,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M37.o3475658 [2024-01-05 01:57:16,404] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M37.o3475658 [2024-01-05 01:57:16,404] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M37.o3475658 [2024-01-05 01:57:16,411] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M37.o3475658 [2024-01-05 01:57:16,426] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M37.o3475658 [2024-01-05 01:57:16,434] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:16,437] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:16,437] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:16,443] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:16,456] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:16,462] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: FASTQC.qsub [2024-01-05 01:57:16,465] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: FASTQC.qsub [2024-01-05 01:57:16,465] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: FASTQC.qsub [2024-01-05 01:57:16,476] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: FASTQC.qsub [2024-01-05 01:57:16,493] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: FASTQC.qsub [2024-01-05 01:57:16,499] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M43.o3475664 [2024-01-05 01:57:16,501] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M43.o3475664 [2024-01-05 01:57:16,502] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M43.o3475664 [2024-01-05 01:57:16,507] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M43.o3475664 [2024-01-05 01:57:16,520] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M43.o3475664 [2024-01-05 01:57:16,528] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M46.o3475667 [2024-01-05 01:57:16,531] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M46.o3475667 [2024-01-05 01:57:16,531] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M46.o3475667 [2024-01-05 01:57:16,537] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M46.o3475667 [2024-01-05 01:57:16,552] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M46.o3475667 [2024-01-05 01:57:16,559] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M30.o3475651 [2024-01-05 01:57:16,605] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M30.o3475651 [2024-01-05 01:57:16,620] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M30.o3475651 [2024-01-05 01:57:16,627] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M24.o3475644 [2024-01-05 01:57:16,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M24.o3475644 [2024-01-05 01:57:16,630] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M24.o3475644 [2024-01-05 01:57:16,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 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ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M4.o3475623 [2024-01-05 01:57:16,698] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M4.o3475623 [2024-01-05 01:57:16,699] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M4.o3475623 [2024-01-05 01:57:16,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M4.o3475623 [2024-01-05 01:57:16,723] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M4.o3475623 [2024-01-05 01:57:16,730] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M25.o3475645 [2024-01-05 01:57:16,734] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M25.o3475645 [2024-01-05 01:57:16,734] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M25.o3475645 [2024-01-05 01:57:16,739] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M25.o3475645 [2024-01-05 01:57:16,759] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M25.o3475645 [2024-01-05 01:57:16,768] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M27.o3475647 [2024-01-05 01:57:16,771] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M27.o3475647 [2024-01-05 01:57:16,772] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M27.o3475647 [2024-01-05 01:57:16,778] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M27.o3475647 [2024-01-05 01:57:16,798] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M27.o3475647 [2024-01-05 01:57:16,804] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M11.o3475630 [2024-01-05 01:57:16,807] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M11.o3475630 [2024-01-05 01:57:16,807] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M11.o3475630 [2024-01-05 01:57:16,812] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M11.o3475630 [2024-01-05 01:57:16,830] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M11.o3475630 [2024-01-05 01:57:16,836] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_02_G219_G219M50.o3475671 [2024-01-05 01:57:16,838] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_02_G219_G219M50.o3475671 [2024-01-05 01:57:16,839] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_02_G219_G219M50.o3475671 [2024-01-05 01:57:16,845] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_02_G219_G219M50.o3475671 [2024-01-05 01:57:16,861] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_02_G219_G219M50.o3475671 [2024-01-05 01:57:16,869] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:16,872] multiqc [DEBUG ] File ignored by 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01:57:16,942] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:16,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:16,948] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:16,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:16,999] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,013] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,016] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,016] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,021] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,021] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,069] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,077] multiqc [DEBUG ] File ignored by 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[2024-01-05 01:57:17,184] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,188] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,188] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,196] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,255] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 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01:57:17,391] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:17,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,403] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,404] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,409] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:17,410] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 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01:57:19,439] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:19,439] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:19,494] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:19,502] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:19,505] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:19,506] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 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[2024-01-05 01:57:20,040] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:20,043] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:20,043] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:20,047] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:20,047] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:20,101] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 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01:57:21,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:21,218] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:21,218] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:21,222] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:21,222] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_CKDL230043734-1A_22GGGVLT3_L8_R2_fastqc.html [2024-01-05 01:57:21,270] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 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01:57:22,194] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:22,194] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:22,199] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:22,200] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:22,248] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:22,261] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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01:57:24,832] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:24,832] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:24,880] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:24,896] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:24,899] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_CKDL230043734-1A_22GGGVLT3_L8_R1_fastqc.html [2024-01-05 01:57:24,899] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 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01:57:26,387] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:26,391] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:26,397] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:26,416] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G219_G219M26.o3476846 [2024-01-05 01:57:26,421] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G219_G219M26.o3476846 [2024-01-05 01:57:26,428] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G219_G219M26.o3476846 [2024-01-05 01:57:26,446] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G219_G219M43.o3476863 [2024-01-05 01:57:26,652] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G219_G219M7.o3476827 [2024-01-05 01:57:26,655] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G219_G219M7.o3476827 [2024-01-05 01:57:26,660] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_04_G219_G219M7.o3476827 [2024-01-05 01:57:26,680] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_04_G219_G219M29.o3476849 [2024-01-05 01:57:26,682] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_04_G219_G219M29.o3476849 [2024-01-05 01:57:26,693] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern 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because it exceeded search pattern filesize limit: Step_03_G219_G219M50.o3476446 [2024-01-05 01:57:27,017] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M4.o3476400 [2024-01-05 01:57:27,021] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M4.o3476400 [2024-01-05 01:57:27,041] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M18.o3476414 [2024-01-05 01:57:27,044] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M18.o3476414 [2024-01-05 01:57:27,065] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M11.o3476407 [2024-01-05 01:57:27,068] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M11.o3476407 [2024-01-05 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[2024-01-05 01:57:27,379] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M36.o3476432 [2024-01-05 01:57:27,382] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M36.o3476432 [2024-01-05 01:57:27,406] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M27.o3476423 [2024-01-05 01:57:27,410] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M27.o3476423 [2024-01-05 01:57:27,441] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M29.o3476425 [2024-01-05 01:57:27,443] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M29.o3476425 [2024-01-05 01:57:27,465] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M33.o3476429 [2024-01-05 01:57:27,468] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M33.o3476429 [2024-01-05 01:57:27,491] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M40.o3476436 [2024-01-05 01:57:27,494] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M40.o3476436 [2024-01-05 01:57:27,513] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M16.o3476412 [2024-01-05 01:57:27,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M16.o3476412 [2024-01-05 01:57:27,543] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M30.o3476426 [2024-01-05 01:57:27,547] multiqc [DEBUG ] File 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Step_03_G219_G219M2.o3476398 [2024-01-05 01:57:27,710] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M41.o3476437 [2024-01-05 01:57:27,753] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M41.o3476437 [2024-01-05 01:57:27,969] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M39.o3476435 [2024-01-05 01:57:27,973] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M39.o3476435 [2024-01-05 01:57:28,000] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M44.o3476440 [2024-01-05 01:57:28,003] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M44.o3476440 [2024-01-05 01:57:28,023] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M10.o3476406 [2024-01-05 01:57:28,026] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M10.o3476406 [2024-01-05 01:57:28,056] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M25.o3476421 [2024-01-05 01:57:28,059] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M25.o3476421 [2024-01-05 01:57:28,086] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:28,090] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:28,095] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:28,110] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Read_Length.sh [2024-01-05 01:57:28,114] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Read_Length.sh [2024-01-05 01:57:28,120] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Read_Length.sh [2024-01-05 01:57:28,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M35.o3476431 [2024-01-05 01:57:28,141] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M35.o3476431 [2024-01-05 01:57:28,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:28,165] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:28,169] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:28,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M12.o3476408 [2024-01-05 01:57:28,191] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M12.o3476408 [2024-01-05 01:57:28,220] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M31.o3476427 [2024-01-05 01:57:28,223] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M31.o3476427 [2024-01-05 01:57:28,245] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:28,248] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:28,249] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:28,258] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:28,276] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:28,288] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M3.o3476399 [2024-01-05 01:57:28,292] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M3.o3476399 [2024-01-05 01:57:28,314] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M45.o3476441 [2024-01-05 01:57:28,316] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M45.o3476441 [2024-01-05 01:57:28,342] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M7.o3476403 [2024-01-05 01:57:28,345] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M7.o3476403 [2024-01-05 01:57:28,365] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M34.o3476430 [2024-01-05 01:57:28,367] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M34.o3476430 [2024-01-05 01:57:28,394] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M49.o3476445 [2024-01-05 01:57:28,397] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M49.o3476445 [2024-01-05 01:57:28,417] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M21.o3476417 [2024-01-05 01:57:28,421] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M21.o3476417 [2024-01-05 01:57:28,442] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M43.o3476439 [2024-01-05 01:57:28,445] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M43.o3476439 [2024-01-05 01:57:28,469] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Read_Length.qsub [2024-01-05 01:57:28,472] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Read_Length.qsub [2024-01-05 01:57:28,473] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Read_Length.qsub [2024-01-05 01:57:28,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Read_Length.qsub [2024-01-05 01:57:28,507] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Read_Length.qsub [2024-01-05 01:57:28,579] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M14.o3476410 [2024-01-05 01:57:28,625] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M14.o3476410 [2024-01-05 01:57:28,823] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M26.o3476422 [2024-01-05 01:57:28,828] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M26.o3476422 [2024-01-05 01:57:28,849] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M46.o3476442 [2024-01-05 01:57:28,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M46.o3476442 [2024-01-05 01:57:28,877] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_03_G219_G219M13.o3476409 [2024-01-05 01:57:28,880] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_03_G219_G219M13.o3476409 [2024-01-05 01:57:29,269] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2024-01-05 01:57:29,272] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2024-01-05 01:57:29,272] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2024-01-05 01:57:29,278] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2024-01-05 01:57:29,288] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Read_Length_Stats.txt [2024-01-05 01:57:30,380] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: fastq_reads.qsub [2024-01-05 01:57:30,387] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: fastq_reads.qsub [2024-01-05 01:57:30,421] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2024-01-05 01:57:30,424] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2024-01-05 01:57:30,425] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2024-01-05 01:57:30,432] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2024-01-05 01:57:30,441] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: number_of_unique_reads.tsv [2024-01-05 01:57:30,447] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:30,450] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:30,450] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:30,455] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:30,474] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:30,491] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M36.o3477763 [2024-01-05 01:57:30,493] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M36.o3477763 [2024-01-05 01:57:30,498] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M36.o3477763 [2024-01-05 01:57:30,515] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M44.o3477771 [2024-01-05 01:57:30,518] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M44.o3477771 [2024-01-05 01:57:30,524] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M44.o3477771 [2024-01-05 01:57:30,542] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M22.o3477749 [2024-01-05 01:57:30,545] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M22.o3477749 [2024-01-05 01:57:30,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M22.o3477749 [2024-01-05 01:57:30,569] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M40.o3477767 [2024-01-05 01:57:30,572] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M40.o3477767 [2024-01-05 01:57:30,577] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M40.o3477767 [2024-01-05 01:57:30,603] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M5.o3477732 [2024-01-05 01:57:30,607] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M5.o3477732 [2024-01-05 01:57:30,613] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M5.o3477732 [2024-01-05 01:57:30,628] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M16.o3477743 [2024-01-05 01:57:30,631] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M16.o3477743 [2024-01-05 01:57:30,637] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M16.o3477743 [2024-01-05 01:57:30,668] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M27.o3477754 [2024-01-05 01:57:30,672] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M27.o3477754 [2024-01-05 01:57:30,677] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M27.o3477754 [2024-01-05 01:57:30,704] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M50.o3477777 [2024-01-05 01:57:30,709] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M50.o3477777 [2024-01-05 01:57:30,715] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M50.o3477777 [2024-01-05 01:57:30,741] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M23.o3477750 [2024-01-05 01:57:30,746] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M23.o3477750 [2024-01-05 01:57:30,755] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M23.o3477750 [2024-01-05 01:57:30,774] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M43.o3477770 [2024-01-05 01:57:30,777] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M43.o3477770 [2024-01-05 01:57:30,784] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M43.o3477770 [2024-01-05 01:57:30,835] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M45.o3477772 [2024-01-05 01:57:30,838] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M45.o3477772 [2024-01-05 01:57:30,843] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M45.o3477772 [2024-01-05 01:57:30,873] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M20.o3477747 [2024-01-05 01:57:30,876] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M20.o3477747 [2024-01-05 01:57:30,880] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M20.o3477747 [2024-01-05 01:57:30,903] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M14.o3477741 [2024-01-05 01:57:30,905] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M14.o3477741 [2024-01-05 01:57:30,917] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M14.o3477741 [2024-01-05 01:57:30,935] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M42.o3477769 [2024-01-05 01:57:30,939] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M42.o3477769 [2024-01-05 01:57:30,943] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M42.o3477769 [2024-01-05 01:57:30,959] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M37.o3477764 [2024-01-05 01:57:30,962] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M37.o3477764 [2024-01-05 01:57:30,967] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M37.o3477764 [2024-01-05 01:57:30,985] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M1.o3477728 [2024-01-05 01:57:30,988] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M1.o3477728 [2024-01-05 01:57:30,993] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M1.o3477728 [2024-01-05 01:57:31,009] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M25.o3477752 [2024-01-05 01:57:31,012] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M25.o3477752 [2024-01-05 01:57:31,022] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M25.o3477752 [2024-01-05 01:57:31,042] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M17.o3477744 [2024-01-05 01:57:31,045] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M17.o3477744 [2024-01-05 01:57:31,050] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M17.o3477744 [2024-01-05 01:57:31,067] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M4.o3477731 [2024-01-05 01:57:31,070] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M4.o3477731 [2024-01-05 01:57:31,076] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M4.o3477731 [2024-01-05 01:57:31,092] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M26.o3477753 [2024-01-05 01:57:31,095] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 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ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M6.o3477733 [2024-01-05 01:57:31,224] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M10.o3477737 [2024-01-05 01:57:31,228] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M10.o3477737 [2024-01-05 01:57:31,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M10.o3477737 [2024-01-05 01:57:31,260] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M32.o3477759 [2024-01-05 01:57:31,262] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M32.o3477759 [2024-01-05 01:57:31,268] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M32.o3477759 [2024-01-05 01:57:31,294] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M8.o3477735 [2024-01-05 01:57:31,297] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M8.o3477735 [2024-01-05 01:57:31,302] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M8.o3477735 [2024-01-05 01:57:31,320] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M13.o3477740 [2024-01-05 01:57:31,323] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M13.o3477740 [2024-01-05 01:57:31,329] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M13.o3477740 [2024-01-05 01:57:31,350] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M11.o3477738 [2024-01-05 01:57:31,353] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M11.o3477738 [2024-01-05 01:57:31,358] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M11.o3477738 [2024-01-05 01:57:31,378] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M15.o3477742 [2024-01-05 01:57:31,380] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M15.o3477742 [2024-01-05 01:57:31,385] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M15.o3477742 [2024-01-05 01:57:31,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M28.o3477755 [2024-01-05 01:57:31,470] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M28.o3477755 [2024-01-05 01:57:31,486] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M35.o3477762 [2024-01-05 01:57:31,489] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M35.o3477762 [2024-01-05 01:57:31,495] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M35.o3477762 [2024-01-05 01:57:31,515] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M33.o3477760 [2024-01-05 01:57:31,517] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M33.o3477760 [2024-01-05 01:57:31,522] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M33.o3477760 [2024-01-05 01:57:31,538] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M47.o3477774 [2024-01-05 01:57:31,542] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M47.o3477774 [2024-01-05 01:57:31,548] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M47.o3477774 [2024-01-05 01:57:31,579] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M39.o3477766 [2024-01-05 01:57:31,582] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M39.o3477766 [2024-01-05 01:57:31,587] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M39.o3477766 [2024-01-05 01:57:31,602] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M29.o3477756 [2024-01-05 01:57:31,606] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M29.o3477756 [2024-01-05 01:57:31,612] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M29.o3477756 [2024-01-05 01:57:31,629] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BAM_Count.qsub [2024-01-05 01:57:31,633] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: BAM_Count.qsub [2024-01-05 01:57:31,633] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BAM_Count.qsub [2024-01-05 01:57:31,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BAM_Count.qsub [2024-01-05 01:57:31,664] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: BAM_Count.qsub [2024-01-05 01:57:31,672] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M41.o3477768 [2024-01-05 01:57:31,675] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M41.o3477768 [2024-01-05 01:57:31,681] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M41.o3477768 [2024-01-05 01:57:31,697] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M2.o3477729 [2024-01-05 01:57:31,699] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M2.o3477729 [2024-01-05 01:57:31,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M2.o3477729 [2024-01-05 01:57:31,729] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M34.o3477761 [2024-01-05 01:57:31,732] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M34.o3477761 [2024-01-05 01:57:31,738] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M34.o3477761 [2024-01-05 01:57:31,755] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:31,758] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:31,770] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:31,784] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M9.o3477736 [2024-01-05 01:57:31,788] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M9.o3477736 [2024-01-05 01:57:31,793] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M9.o3477736 [2024-01-05 01:57:31,813] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:31,816] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:31,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:31,836] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M46.o3477773 [2024-01-05 01:57:31,840] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M46.o3477773 [2024-01-05 01:57:31,846] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M46.o3477773 [2024-01-05 01:57:31,863] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M30.o3477757 [2024-01-05 01:57:31,866] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M30.o3477757 [2024-01-05 01:57:31,877] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M30.o3477757 [2024-01-05 01:57:31,908] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M12.o3477739 [2024-01-05 01:57:31,912] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M12.o3477739 [2024-01-05 01:57:31,917] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M12.o3477739 [2024-01-05 01:57:31,940] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M24.o3477751 [2024-01-05 01:57:31,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M24.o3477751 [2024-01-05 01:57:31,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M24.o3477751 [2024-01-05 01:57:31,966] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:31,969] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:31,969] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:31,979] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:31,990] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:32,006] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M7.o3477734 [2024-01-05 01:57:32,010] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M7.o3477734 [2024-01-05 01:57:32,015] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 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ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M49.o3477776 [2024-01-05 01:57:32,110] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M49.o3477776 [2024-01-05 01:57:32,114] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M49.o3477776 [2024-01-05 01:57:32,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M38.o3477765 [2024-01-05 01:57:32,140] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M38.o3477765 [2024-01-05 01:57:32,146] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M38.o3477765 [2024-01-05 01:57:32,189] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_05_G219_G219M21.o3477748 [2024-01-05 01:57:32,192] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_05_G219_G219M21.o3477748 [2024-01-05 01:57:32,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_05_G219_G219M21.o3477748 [2024-01-05 01:57:32,211] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_BAM_Count.sh [2024-01-05 01:57:32,215] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_BAM_Count.sh [2024-01-05 01:57:32,220] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_BAM_Count.sh [2024-01-05 01:57:32,239] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Read_Counts.sh [2024-01-05 01:57:32,242] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Read_Counts.sh [2024-01-05 01:57:32,263] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2024-01-05 01:57:32,266] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2024-01-05 01:57:32,266] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2024-01-05 01:57:32,271] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2024-01-05 01:57:32,283] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Chr_Read_Counts.R [2024-01-05 01:57:32,317] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BAM_Count_Stats.txt [2024-01-05 01:57:32,320] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BAM_Count_Stats.txt [2024-01-05 01:57:32,325] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BAM_Count_Stats.txt [2024-01-05 01:57:32,448] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Read_strand_count_Stats.txt [2024-01-05 01:57:32,451] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Read_strand_count_Stats.txt [2024-01-05 01:57:32,468] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Read_strand_count_Stats.txt [2024-01-05 01:57:34,103] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Chr_Read_Counts.pdf [2024-01-05 01:57:35,863] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2024-01-05 01:57:35,866] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2024-01-05 01:57:35,866] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2024-01-05 01:57:35,871] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2024-01-05 01:57:35,892] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 03_Run_Pipeline.sh [2024-01-05 01:57:35,898] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: diffreps_parser.sh [2024-01-05 01:57:35,902] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: diffreps_parser.sh [2024-01-05 01:57:35,908] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: diffreps_parser.sh [2024-01-05 01:57:35,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2024-01-05 01:57:35,931] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2024-01-05 01:57:35,931] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2024-01-05 01:57:35,938] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2024-01-05 01:57:35,954] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Pipeline_Version_History.txt [2024-01-05 01:57:35,963] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2024-01-05 01:57:35,966] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2024-01-05 01:57:35,966] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2024-01-05 01:57:35,972] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2024-01-05 01:57:35,991] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 01_Pipeline_Setup.sh [2024-01-05 01:57:36,022] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:36,025] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:36,031] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:36,046] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:36,049] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:36,049] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:36,057] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:36,078] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:36,086] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M18.o3480786 [2024-01-05 01:57:36,095] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M18.o3480786 [2024-01-05 01:57:36,100] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M18.o3480786 [2024-01-05 01:57:36,115] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M35.o3480803 [2024-01-05 01:57:36,118] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M35.o3480803 [2024-01-05 01:57:36,123] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M35.o3480803 [2024-01-05 01:57:36,137] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M11.o3480779 [2024-01-05 01:57:36,140] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M11.o3480779 [2024-01-05 01:57:36,146] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M11.o3480779 [2024-01-05 01:57:36,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M3.o3480771 [2024-01-05 01:57:36,164] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M3.o3480771 [2024-01-05 01:57:36,169] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M3.o3480771 [2024-01-05 01:57:36,185] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M27.o3480795 [2024-01-05 01:57:36,189] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M27.o3480795 [2024-01-05 01:57:36,200] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M27.o3480795 [2024-01-05 01:57:36,215] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Peak_Union_Count.sh [2024-01-05 01:57:36,218] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Peak_Union_Count.sh [2024-01-05 01:57:36,226] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Peak_Union_Count.sh [2024-01-05 01:57:36,245] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M32.o3480800 [2024-01-05 01:57:36,249] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M32.o3480800 [2024-01-05 01:57:36,255] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M32.o3480800 [2024-01-05 01:57:36,273] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M12.o3480780 [2024-01-05 01:57:36,276] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M12.o3480780 [2024-01-05 01:57:36,281] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M12.o3480780 [2024-01-05 01:57:36,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M8.o3480776 [2024-01-05 01:57:36,310] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M8.o3480776 [2024-01-05 01:57:36,317] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M8.o3480776 [2024-01-05 01:57:36,340] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M33.o3480801 [2024-01-05 01:57:36,344] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M33.o3480801 [2024-01-05 01:57:36,349] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M33.o3480801 [2024-01-05 01:57:36,388] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M21.o3480789 [2024-01-05 01:57:36,393] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M21.o3480789 [2024-01-05 01:57:36,398] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M21.o3480789 [2024-01-05 01:57:36,425] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M45.o3480813 [2024-01-05 01:57:36,429] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M45.o3480813 [2024-01-05 01:57:36,435] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M45.o3480813 [2024-01-05 01:57:36,450] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M14.o3480782 [2024-01-05 01:57:36,453] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M14.o3480782 [2024-01-05 01:57:36,459] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M14.o3480782 [2024-01-05 01:57:36,477] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M43.o3480811 [2024-01-05 01:57:36,480] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M43.o3480811 [2024-01-05 01:57:36,486] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M43.o3480811 [2024-01-05 01:57:36,501] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M24.o3480792 [2024-01-05 01:57:36,505] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M24.o3480792 [2024-01-05 01:57:36,510] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M24.o3480792 [2024-01-05 01:57:36,530] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M40.o3480808 [2024-01-05 01:57:36,535] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M40.o3480808 [2024-01-05 01:57:36,542] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M40.o3480808 [2024-01-05 01:57:36,560] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern 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[DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M36.o3480804 [2024-01-05 01:57:36,624] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M36.o3480804 [2024-01-05 01:57:36,644] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M28.o3480796 [2024-01-05 01:57:36,647] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M28.o3480796 [2024-01-05 01:57:36,653] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M28.o3480796 [2024-01-05 01:57:36,673] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M34.o3480802 [2024-01-05 01:57:36,676] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern 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[DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M29.o3480797 [2024-01-05 01:57:36,751] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M37.o3480805 [2024-01-05 01:57:36,755] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M37.o3480805 [2024-01-05 01:57:36,760] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M37.o3480805 [2024-01-05 01:57:36,777] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M38.o3480806 [2024-01-05 01:57:36,781] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M38.o3480806 [2024-01-05 01:57:36,786] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M38.o3480806 [2024-01-05 01:57:36,802] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M49.o3480818 [2024-01-05 01:57:36,805] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M49.o3480818 [2024-01-05 01:57:36,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M49.o3480818 [2024-01-05 01:57:36,827] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M42.o3480810 [2024-01-05 01:57:36,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M42.o3480810 [2024-01-05 01:57:36,842] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M42.o3480810 [2024-01-05 01:57:36,859] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M46.o3480814 [2024-01-05 01:57:36,861] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M46.o3480814 [2024-01-05 01:57:36,867] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M46.o3480814 [2024-01-05 01:57:36,881] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M41.o3480809 [2024-01-05 01:57:36,883] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M41.o3480809 [2024-01-05 01:57:36,889] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M41.o3480809 [2024-01-05 01:57:36,910] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M10.o3480778 [2024-01-05 01:57:36,913] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M10.o3480778 [2024-01-05 01:57:36,919] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M10.o3480778 [2024-01-05 01:57:36,935] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M5.o3480773 [2024-01-05 01:57:36,944] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M5.o3480773 [2024-01-05 01:57:36,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M5.o3480773 [2024-01-05 01:57:36,963] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M48.o3480817 [2024-01-05 01:57:36,966] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M48.o3480817 [2024-01-05 01:57:36,971] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M48.o3480817 [2024-01-05 01:57:36,989] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M15.o3480783 [2024-01-05 01:57:36,992] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M15.o3480783 [2024-01-05 01:57:36,998] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M15.o3480783 [2024-01-05 01:57:37,014] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M19.o3480787 [2024-01-05 01:57:37,018] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M19.o3480787 [2024-01-05 01:57:37,024] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M19.o3480787 [2024-01-05 01:57:37,050] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:37,053] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:37,058] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:37,071] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2024-01-05 01:57:37,073] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2024-01-05 01:57:37,073] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2024-01-05 01:57:37,078] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2024-01-05 01:57:37,095] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Peak_Union_Count.qsub [2024-01-05 01:57:37,102] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M26.o3480794 [2024-01-05 01:57:37,105] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M26.o3480794 [2024-01-05 01:57:37,111] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M26.o3480794 [2024-01-05 01:57:37,131] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:37,134] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:37,140] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:37,161] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M47.o3480816 [2024-01-05 01:57:37,165] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M47.o3480816 [2024-01-05 01:57:37,170] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M47.o3480816 [2024-01-05 01:57:37,188] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M2.o3480770 [2024-01-05 01:57:37,192] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M2.o3480770 [2024-01-05 01:57:37,197] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M2.o3480770 [2024-01-05 01:57:37,212] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M20.o3480788 [2024-01-05 01:57:37,215] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M20.o3480788 [2024-01-05 01:57:37,220] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M20.o3480788 [2024-01-05 01:57:37,236] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:37,239] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:37,244] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:37,267] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M7.o3480775 [2024-01-05 01:57:37,270] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M7.o3480775 [2024-01-05 01:57:37,277] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M7.o3480775 [2024-01-05 01:57:37,293] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M31.o3480799 [2024-01-05 01:57:37,297] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M31.o3480799 [2024-01-05 01:57:37,303] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M31.o3480799 [2024-01-05 01:57:37,318] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M39.o3480807 [2024-01-05 01:57:37,322] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M39.o3480807 [2024-01-05 01:57:37,327] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M39.o3480807 [2024-01-05 01:57:37,342] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M30.o3480798 [2024-01-05 01:57:37,345] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M30.o3480798 [2024-01-05 01:57:37,350] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M30.o3480798 [2024-01-05 01:57:37,369] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M13.o3480781 [2024-01-05 01:57:37,372] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M13.o3480781 [2024-01-05 01:57:37,380] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M13.o3480781 [2024-01-05 01:57:37,401] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M23.o3480791 [2024-01-05 01:57:37,404] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M23.o3480791 [2024-01-05 01:57:37,409] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M23.o3480791 [2024-01-05 01:57:37,426] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M50.o3480819 [2024-01-05 01:57:37,428] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M50.o3480819 [2024-01-05 01:57:37,434] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M50.o3480819 [2024-01-05 01:57:37,449] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M25.o3480793 [2024-01-05 01:57:37,452] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M25.o3480793 [2024-01-05 01:57:37,457] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M25.o3480793 [2024-01-05 01:57:37,497] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M44.o3480812 [2024-01-05 01:57:37,501] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M44.o3480812 [2024-01-05 01:57:37,507] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M44.o3480812 [2024-01-05 01:57:37,524] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M1.o3480769 [2024-01-05 01:57:37,529] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M1.o3480769 [2024-01-05 01:57:37,537] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M1.o3480769 [2024-01-05 01:57:37,558] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M22.o3480790 [2024-01-05 01:57:37,561] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M22.o3480790 [2024-01-05 01:57:37,568] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M22.o3480790 [2024-01-05 01:57:37,593] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M17.o3480785 [2024-01-05 01:57:37,598] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M17.o3480785 [2024-01-05 01:57:37,606] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M17.o3480785 [2024-01-05 01:57:37,624] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_09_G219_G219M6.o3480774 [2024-01-05 01:57:37,627] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_09_G219_G219M6.o3480774 [2024-01-05 01:57:37,632] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_09_G219_G219M6.o3480774 [2024-01-05 01:57:37,703] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2024-01-05 01:57:37,706] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2024-01-05 01:57:37,706] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2024-01-05 01:57:37,712] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2024-01-05 01:57:37,734] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.Rmd [2024-01-05 01:57:37,742] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Norm_Factors.txt [2024-01-05 01:57:37,745] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Norm_Factors.txt [2024-01-05 01:57:37,749] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Norm_Factors.txt [2024-01-05 01:57:37,764] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.txt [2024-01-05 01:57:37,766] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.txt [2024-01-05 01:57:37,772] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Union_Count_Stats.txt [2024-01-05 01:57:37,796] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:57:37,800] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:57:37,801] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:57:37,809] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:57:37,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:57:37,905] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M16_read_Peak_Union.out1 [2024-01-05 01:57:37,916] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:37,919] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:37,919] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:37,928] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:37,928] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:38,021] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M44_read_Peak_Union.out1 [2024-01-05 01:57:38,032] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:38,034] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:38,035] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:38,040] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:38,040] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:38,143] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M1_read_Peak_Union.out1 [2024-01-05 01:57:38,154] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:57:38,157] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:57:38,157] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:57:38,162] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:57:38,162] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:57:38,254] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M14_read_Peak_Union.out1 [2024-01-05 01:57:38,263] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:57:38,266] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:57:38,267] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:57:38,272] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:57:38,272] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:57:38,367] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M42_read_Peak_Union.out1 [2024-01-05 01:57:38,379] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:57:38,381] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:57:38,381] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:57:38,386] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:57:38,386] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:57:38,481] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:57:38,493] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:57:38,495] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:57:38,496] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:57:38,500] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:57:38,501] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:57:38,594] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M12_read_Peak_Union.out1 [2024-01-05 01:57:38,605] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:57:38,608] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:57:38,608] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:57:38,614] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:57:38,614] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:57:38,713] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M3_read_Peak_Union.out1 [2024-01-05 01:57:38,725] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:57:38,728] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:57:38,728] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:57:38,733] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:57:38,733] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:57:38,826] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M49_read_Peak_Union.out1 [2024-01-05 01:57:38,841] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:38,844] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:38,844] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:38,849] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:38,850] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:38,947] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M24_read_Peak_Union.out1 [2024-01-05 01:57:38,958] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:57:38,961] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:57:38,961] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:57:38,966] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:57:38,966] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:57:39,066] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M43_read_Peak_Union.out1 [2024-01-05 01:57:39,075] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:57:39,078] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:57:39,078] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:57:39,090] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:57:39,090] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:57:39,192] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M20_read_Peak_Union.out1 [2024-01-05 01:57:39,203] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:57:39,206] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:57:39,207] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:57:39,213] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:57:39,213] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:57:39,303] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M2_read_Peak_Union.out1 [2024-01-05 01:57:39,316] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:57:39,319] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:57:39,319] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:57:39,325] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:57:39,325] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:57:39,421] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M8_read_Peak_Union.out1 [2024-01-05 01:57:39,432] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:57:39,435] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:57:39,435] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:57:39,441] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:57:39,441] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:57:39,531] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M17_read_Peak_Union.out1 [2024-01-05 01:57:39,543] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:39,546] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:39,546] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:39,552] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:39,552] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:39,652] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M13_read_Peak_Union.out1 [2024-01-05 01:57:39,664] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:39,666] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:39,666] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:39,670] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:39,670] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:39,760] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M35_read_Peak_Union.out1 [2024-01-05 01:57:39,771] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:57:39,774] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:57:39,774] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:57:39,781] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:57:39,781] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:57:39,880] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M26_read_Peak_Union.out1 [2024-01-05 01:57:39,891] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:57:39,893] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:57:39,894] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:57:39,900] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:57:39,900] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:57:39,992] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M31_read_Peak_Union.out1 [2024-01-05 01:57:40,004] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:57:40,007] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:57:40,007] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:57:40,012] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:57:40,013] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:57:40,105] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:57:40,116] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:57:40,119] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:57:40,119] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:57:40,125] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:57:40,125] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:57:40,216] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M28_read_Peak_Union.out1 [2024-01-05 01:57:40,228] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:57:40,231] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:57:40,231] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:57:40,236] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:57:40,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:57:40,327] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M34_read_Peak_Union.out1 [2024-01-05 01:57:40,338] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:57:40,340] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:57:40,341] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:57:40,349] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:57:40,349] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:57:40,445] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M23_read_Peak_Union.out1 [2024-01-05 01:57:40,457] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:57:40,459] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:57:40,460] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:57:40,465] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:57:40,465] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:57:40,555] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M38_read_Peak_Union.out1 [2024-01-05 01:57:40,566] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:57:40,570] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:57:40,570] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:57:40,576] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:57:40,576] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:57:40,668] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M11_read_Peak_Union.out1 [2024-01-05 01:57:40,679] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:57:40,683] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:57:40,683] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:57:40,689] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:57:40,689] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:57:40,783] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M9_read_Peak_Union.out1 [2024-01-05 01:57:40,794] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:57:40,797] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:57:40,798] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:57:40,810] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:57:40,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:57:40,897] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M10_read_Peak_Union.out1 [2024-01-05 01:57:40,913] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:57:40,915] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:57:40,916] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:57:40,921] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:57:40,922] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:57:41,019] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M39_read_Peak_Union.out1 [2024-01-05 01:57:41,030] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:57:41,033] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:57:41,034] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:57:41,039] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:57:41,039] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:57:41,133] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M36_read_Peak_Union.out1 [2024-01-05 01:57:41,143] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:57:41,147] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:57:41,147] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:57:41,152] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:57:41,152] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:57:41,248] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:57:41,259] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:57:41,262] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:57:41,262] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:57:41,267] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:57:41,267] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:57:41,357] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M21_read_Peak_Union.out1 [2024-01-05 01:57:41,370] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:41,373] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:41,373] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:41,378] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:41,379] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:41,474] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M33_read_Peak_Union.out1 [2024-01-05 01:57:41,485] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:57:41,489] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:57:41,489] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:57:41,496] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:57:41,496] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:57:41,595] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M4_read_Peak_Union.out1 [2024-01-05 01:57:41,606] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:57:41,608] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:57:41,608] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:57:41,613] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:57:41,613] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:57:41,714] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M48_read_Peak_Union.out1 [2024-01-05 01:57:41,726] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:57:41,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:57:41,729] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:57:41,736] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:57:41,736] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:57:41,832] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M19_read_Peak_Union.out1 [2024-01-05 01:57:41,843] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:57:41,847] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:57:41,847] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:57:41,853] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:57:41,853] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:57:41,950] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M25_read_Peak_Union.out1 [2024-01-05 01:57:41,961] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:57:41,964] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:57:41,964] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:57:41,971] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:57:41,972] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:57:42,082] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M37_read_Peak_Union.out1 [2024-01-05 01:57:42,092] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:57:42,100] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:57:42,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:57:42,105] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:57:42,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:57:42,207] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M32_read_Peak_Union.out1 [2024-01-05 01:57:42,219] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:42,221] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:42,222] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:42,227] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:42,227] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:42,327] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M22_read_Peak_Union.out1 [2024-01-05 01:57:42,338] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:57:42,341] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:57:42,342] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:57:42,347] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:57:42,348] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:57:42,437] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M5_read_Peak_Union.out1 [2024-01-05 01:57:42,449] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:57:42,452] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:57:42,453] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:57:42,458] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:57:42,458] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:57:42,575] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M45_read_Peak_Union.out1 [2024-01-05 01:57:42,586] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:57:42,589] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:57:42,589] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:57:42,595] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:57:42,595] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:57:42,687] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M40_read_Peak_Union.out1 [2024-01-05 01:57:42,697] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:57:42,700] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:57:42,701] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:57:42,706] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:57:42,706] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:57:42,798] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M50_read_Peak_Union.out1 [2024-01-05 01:57:42,811] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:57:42,815] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:57:42,815] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:57:42,820] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:57:42,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:57:42,916] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M15_read_Peak_Union.out1 [2024-01-05 01:57:42,929] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:57:42,932] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:57:42,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:57:42,937] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:57:42,938] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:57:43,032] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M27_read_Peak_Union.out1 [2024-01-05 01:57:43,043] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:57:43,046] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:57:43,046] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:57:43,053] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:57:43,053] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:57:43,150] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:57:43,162] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:43,165] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:43,166] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:43,179] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:43,179] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:43,285] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:43,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:57:43,299] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:57:43,300] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:57:43,304] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:57:43,304] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:57:43,399] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M46_read_Peak_Union.out1 [2024-01-05 01:57:43,411] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:57:43,414] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:57:43,414] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:57:43,419] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:57:43,420] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:57:43,519] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M7_read_Peak_Union.out1 [2024-01-05 01:57:43,531] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:57:43,534] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:57:43,534] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:57:43,540] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:57:43,540] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:57:43,638] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M47_read_Peak_Union.out1 [2024-01-05 01:57:43,643] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2024-01-05 01:57:43,650] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:43,654] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:43,654] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:43,659] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:43,668] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:43,676] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M38.o3480113 [2024-01-05 01:57:43,678] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M38.o3480113 [2024-01-05 01:57:43,679] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M38.o3480113 [2024-01-05 01:57:43,683] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M38.o3480113 [2024-01-05 01:57:43,696] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M38.o3480113 [2024-01-05 01:57:43,703] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M15.o3480090 [2024-01-05 01:57:43,705] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M15.o3480090 [2024-01-05 01:57:43,705] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M15.o3480090 [2024-01-05 01:57:43,717] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M15.o3480090 [2024-01-05 01:57:43,726] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M15.o3480090 [2024-01-05 01:57:43,733] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M4.o3480079 [2024-01-05 01:57:43,735] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M4.o3480079 [2024-01-05 01:57:43,736] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M4.o3480079 [2024-01-05 01:57:43,741] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M4.o3480079 [2024-01-05 01:57:43,751] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M4.o3480079 [2024-01-05 01:57:43,759] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M6.o3480081 [2024-01-05 01:57:43,761] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M6.o3480081 [2024-01-05 01:57:43,761] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M6.o3480081 [2024-01-05 01:57:43,767] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M6.o3480081 [2024-01-05 01:57:43,779] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M6.o3480081 [2024-01-05 01:57:43,785] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M8.o3480083 [2024-01-05 01:57:43,788] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M8.o3480083 [2024-01-05 01:57:43,788] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M8.o3480083 [2024-01-05 01:57:43,793] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M8.o3480083 [2024-01-05 01:57:43,803] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M8.o3480083 [2024-01-05 01:57:43,809] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M48.o3480123 [2024-01-05 01:57:43,812] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M48.o3480123 [2024-01-05 01:57:43,813] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M48.o3480123 [2024-01-05 01:57:43,824] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M48.o3480123 [2024-01-05 01:57:43,840] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M48.o3480123 [2024-01-05 01:57:43,848] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M14.o3480089 [2024-01-05 01:57:43,851] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M14.o3480089 [2024-01-05 01:57:43,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M14.o3480089 [2024-01-05 01:57:43,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M14.o3480089 [2024-01-05 01:57:43,870] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M14.o3480089 [2024-01-05 01:57:43,877] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M10.o3480085 [2024-01-05 01:57:43,882] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M10.o3480085 [2024-01-05 01:57:43,882] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M10.o3480085 [2024-01-05 01:57:43,891] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M10.o3480085 [2024-01-05 01:57:43,904] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M10.o3480085 [2024-01-05 01:57:43,911] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M39.o3480114 [2024-01-05 01:57:43,915] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M39.o3480114 [2024-01-05 01:57:43,915] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M39.o3480114 [2024-01-05 01:57:43,926] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M39.o3480114 [2024-01-05 01:57:43,940] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M39.o3480114 [2024-01-05 01:57:43,947] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M46.o3480121 [2024-01-05 01:57:43,949] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M46.o3480121 [2024-01-05 01:57:43,950] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M46.o3480121 [2024-01-05 01:57:43,954] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M46.o3480121 [2024-01-05 01:57:43,973] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M46.o3480121 [2024-01-05 01:57:43,980] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M3.o3480078 [2024-01-05 01:57:43,983] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M3.o3480078 [2024-01-05 01:57:43,984] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M3.o3480078 [2024-01-05 01:57:43,990] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M3.o3480078 [2024-01-05 01:57:44,001] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M3.o3480078 [2024-01-05 01:57:44,008] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M41.o3480116 [2024-01-05 01:57:44,010] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M41.o3480116 [2024-01-05 01:57:44,011] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M41.o3480116 [2024-01-05 01:57:44,017] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M41.o3480116 [2024-01-05 01:57:44,033] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M41.o3480116 [2024-01-05 01:57:44,040] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M44.o3480119 [2024-01-05 01:57:44,043] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M44.o3480119 [2024-01-05 01:57:44,043] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M44.o3480119 [2024-01-05 01:57:44,048] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M44.o3480119 [2024-01-05 01:57:44,059] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M44.o3480119 [2024-01-05 01:57:44,066] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M42.o3480117 [2024-01-05 01:57:44,070] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M42.o3480117 [2024-01-05 01:57:44,070] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M42.o3480117 [2024-01-05 01:57:44,076] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M42.o3480117 [2024-01-05 01:57:44,088] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M42.o3480117 [2024-01-05 01:57:44,094] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M47.o3480122 [2024-01-05 01:57:44,097] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M47.o3480122 [2024-01-05 01:57:44,097] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M47.o3480122 [2024-01-05 01:57:44,104] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M47.o3480122 [2024-01-05 01:57:44,117] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M47.o3480122 [2024-01-05 01:57:44,124] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M7.o3480082 [2024-01-05 01:57:44,126] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M7.o3480082 [2024-01-05 01:57:44,127] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M7.o3480082 [2024-01-05 01:57:44,138] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M7.o3480082 [2024-01-05 01:57:44,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M7.o3480082 [2024-01-05 01:57:44,155] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M23.o3480098 [2024-01-05 01:57:44,158] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M23.o3480098 [2024-01-05 01:57:44,159] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M23.o3480098 [2024-01-05 01:57:44,164] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M23.o3480098 [2024-01-05 01:57:44,174] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M23.o3480098 [2024-01-05 01:57:44,181] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M16.o3480091 [2024-01-05 01:57:44,184] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M16.o3480091 [2024-01-05 01:57:44,184] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M16.o3480091 [2024-01-05 01:57:44,190] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M16.o3480091 [2024-01-05 01:57:44,200] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M16.o3480091 [2024-01-05 01:57:44,207] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M45.o3480120 [2024-01-05 01:57:44,210] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M45.o3480120 [2024-01-05 01:57:44,210] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M45.o3480120 [2024-01-05 01:57:44,216] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M45.o3480120 [2024-01-05 01:57:44,230] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M45.o3480120 [2024-01-05 01:57:44,243] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M31.o3480106 [2024-01-05 01:57:44,245] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M31.o3480106 [2024-01-05 01:57:44,246] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M31.o3480106 [2024-01-05 01:57:44,252] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M31.o3480106 [2024-01-05 01:57:44,269] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M31.o3480106 [2024-01-05 01:57:44,276] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M24.o3480099 [2024-01-05 01:57:44,279] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M24.o3480099 [2024-01-05 01:57:44,279] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M24.o3480099 [2024-01-05 01:57:44,285] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M24.o3480099 [2024-01-05 01:57:44,299] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M24.o3480099 [2024-01-05 01:57:44,309] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M49.o3480124 [2024-01-05 01:57:44,311] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M49.o3480124 [2024-01-05 01:57:44,312] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M49.o3480124 [2024-01-05 01:57:44,318] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M49.o3480124 [2024-01-05 01:57:44,340] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M49.o3480124 [2024-01-05 01:57:44,355] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M9.o3480084 [2024-01-05 01:57:44,358] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M9.o3480084 [2024-01-05 01:57:44,358] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M9.o3480084 [2024-01-05 01:57:44,363] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M9.o3480084 [2024-01-05 01:57:44,374] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M9.o3480084 [2024-01-05 01:57:44,380] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M43.o3480118 [2024-01-05 01:57:44,382] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M43.o3480118 [2024-01-05 01:57:44,383] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M43.o3480118 [2024-01-05 01:57:44,389] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M43.o3480118 [2024-01-05 01:57:44,401] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M43.o3480118 [2024-01-05 01:57:44,409] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M30.o3480105 [2024-01-05 01:57:44,413] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M30.o3480105 [2024-01-05 01:57:44,413] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M30.o3480105 [2024-01-05 01:57:44,419] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M30.o3480105 [2024-01-05 01:57:44,428] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M30.o3480105 [2024-01-05 01:57:44,434] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M17.o3480092 [2024-01-05 01:57:44,437] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M17.o3480092 [2024-01-05 01:57:44,437] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M17.o3480092 [2024-01-05 01:57:44,443] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M17.o3480092 [2024-01-05 01:57:44,461] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M17.o3480092 [2024-01-05 01:57:44,470] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M13.o3480088 [2024-01-05 01:57:44,474] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M13.o3480088 [2024-01-05 01:57:44,475] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M13.o3480088 [2024-01-05 01:57:44,481] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M13.o3480088 [2024-01-05 01:57:44,492] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M13.o3480088 [2024-01-05 01:57:44,499] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M34.o3480109 [2024-01-05 01:57:44,502] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M34.o3480109 [2024-01-05 01:57:44,503] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M34.o3480109 [2024-01-05 01:57:44,509] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M34.o3480109 [2024-01-05 01:57:44,521] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M34.o3480109 [2024-01-05 01:57:44,528] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M50.o3480125 [2024-01-05 01:57:44,530] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M50.o3480125 [2024-01-05 01:57:44,531] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M50.o3480125 [2024-01-05 01:57:44,536] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M50.o3480125 [2024-01-05 01:57:44,556] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M50.o3480125 [2024-01-05 01:57:44,568] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M1.o3480076 [2024-01-05 01:57:44,573] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M1.o3480076 [2024-01-05 01:57:44,573] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M1.o3480076 [2024-01-05 01:57:44,580] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M1.o3480076 [2024-01-05 01:57:44,591] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M1.o3480076 [2024-01-05 01:57:44,597] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M19.o3480094 [2024-01-05 01:57:44,600] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M19.o3480094 [2024-01-05 01:57:44,600] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M19.o3480094 [2024-01-05 01:57:44,609] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M19.o3480094 [2024-01-05 01:57:44,625] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M19.o3480094 [2024-01-05 01:57:44,632] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M33.o3480108 [2024-01-05 01:57:44,636] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M33.o3480108 [2024-01-05 01:57:44,637] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M33.o3480108 [2024-01-05 01:57:44,646] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M33.o3480108 [2024-01-05 01:57:44,660] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M33.o3480108 [2024-01-05 01:57:44,673] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M11.o3480086 [2024-01-05 01:57:44,675] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M11.o3480086 [2024-01-05 01:57:44,675] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M11.o3480086 [2024-01-05 01:57:44,682] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M11.o3480086 [2024-01-05 01:57:44,694] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M11.o3480086 [2024-01-05 01:57:44,701] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M25.o3480100 [2024-01-05 01:57:44,704] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M25.o3480100 [2024-01-05 01:57:44,704] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M25.o3480100 [2024-01-05 01:57:44,711] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M25.o3480100 [2024-01-05 01:57:44,729] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M25.o3480100 [2024-01-05 01:57:44,736] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M35.o3480110 [2024-01-05 01:57:44,740] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M35.o3480110 [2024-01-05 01:57:44,740] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M35.o3480110 [2024-01-05 01:57:44,745] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M35.o3480110 [2024-01-05 01:57:44,758] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M35.o3480110 [2024-01-05 01:57:44,764] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:44,768] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:44,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:44,802] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M5.o3480080 [2024-01-05 01:57:44,805] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M5.o3480080 [2024-01-05 01:57:44,805] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M5.o3480080 [2024-01-05 01:57:44,811] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M5.o3480080 [2024-01-05 01:57:44,824] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M5.o3480080 [2024-01-05 01:57:44,830] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:44,834] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:44,839] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:44,857] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M18.o3480093 [2024-01-05 01:57:44,860] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M18.o3480093 [2024-01-05 01:57:44,860] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M18.o3480093 [2024-01-05 01:57:44,866] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M18.o3480093 [2024-01-05 01:57:44,883] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M18.o3480093 [2024-01-05 01:57:44,889] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M32.o3480107 [2024-01-05 01:57:44,891] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M32.o3480107 [2024-01-05 01:57:44,892] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M32.o3480107 [2024-01-05 01:57:44,896] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M32.o3480107 [2024-01-05 01:57:44,908] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M32.o3480107 [2024-01-05 01:57:44,915] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_CollectInsertSizeMetrics.sh [2024-01-05 01:57:44,918] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_CollectInsertSizeMetrics.sh [2024-01-05 01:57:44,923] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_CollectInsertSizeMetrics.sh [2024-01-05 01:57:44,937] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M28.o3480103 [2024-01-05 01:57:44,940] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M28.o3480103 [2024-01-05 01:57:44,940] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M28.o3480103 [2024-01-05 01:57:44,947] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M28.o3480103 [2024-01-05 01:57:44,957] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M28.o3480103 [2024-01-05 01:57:44,963] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2024-01-05 01:57:44,966] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2024-01-05 01:57:44,967] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2024-01-05 01:57:44,971] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2024-01-05 01:57:44,989] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: CollectInsertSizeMetrics.qsub [2024-01-05 01:57:44,996] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M21.o3480096 [2024-01-05 01:57:44,999] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M21.o3480096 [2024-01-05 01:57:44,999] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M21.o3480096 [2024-01-05 01:57:45,005] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M21.o3480096 [2024-01-05 01:57:45,018] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M21.o3480096 [2024-01-05 01:57:45,024] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:45,026] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:45,026] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:45,031] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:45,041] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:45,047] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M29.o3480104 [2024-01-05 01:57:45,050] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M29.o3480104 [2024-01-05 01:57:45,050] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M29.o3480104 [2024-01-05 01:57:45,055] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M29.o3480104 [2024-01-05 01:57:45,065] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M29.o3480104 [2024-01-05 01:57:45,071] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M20.o3480095 [2024-01-05 01:57:45,074] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M20.o3480095 [2024-01-05 01:57:45,075] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M20.o3480095 [2024-01-05 01:57:45,080] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M20.o3480095 [2024-01-05 01:57:45,095] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M20.o3480095 [2024-01-05 01:57:45,102] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M12.o3480087 [2024-01-05 01:57:45,105] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M12.o3480087 [2024-01-05 01:57:45,105] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M12.o3480087 [2024-01-05 01:57:45,111] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M12.o3480087 [2024-01-05 01:57:45,121] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M12.o3480087 [2024-01-05 01:57:45,127] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M22.o3480097 [2024-01-05 01:57:45,131] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M22.o3480097 [2024-01-05 01:57:45,131] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M22.o3480097 [2024-01-05 01:57:45,137] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M22.o3480097 [2024-01-05 01:57:45,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M22.o3480097 [2024-01-05 01:57:45,154] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M40.o3480115 [2024-01-05 01:57:45,158] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M40.o3480115 [2024-01-05 01:57:45,158] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M40.o3480115 [2024-01-05 01:57:45,165] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M40.o3480115 [2024-01-05 01:57:45,183] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M40.o3480115 [2024-01-05 01:57:45,190] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M37.o3480112 [2024-01-05 01:57:45,199] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M37.o3480112 [2024-01-05 01:57:45,199] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M37.o3480112 [2024-01-05 01:57:45,205] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M37.o3480112 [2024-01-05 01:57:45,218] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M37.o3480112 [2024-01-05 01:57:45,226] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M36.o3480111 [2024-01-05 01:57:45,229] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M36.o3480111 [2024-01-05 01:57:45,229] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M36.o3480111 [2024-01-05 01:57:45,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M36.o3480111 [2024-01-05 01:57:45,246] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M36.o3480111 [2024-01-05 01:57:45,254] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M27.o3480102 [2024-01-05 01:57:45,257] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M27.o3480102 [2024-01-05 01:57:45,257] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M27.o3480102 [2024-01-05 01:57:45,263] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M27.o3480102 [2024-01-05 01:57:45,276] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M27.o3480102 [2024-01-05 01:57:45,283] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M2.o3480077 [2024-01-05 01:57:45,286] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M2.o3480077 [2024-01-05 01:57:45,286] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M2.o3480077 [2024-01-05 01:57:45,293] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M2.o3480077 [2024-01-05 01:57:45,309] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M2.o3480077 [2024-01-05 01:57:45,316] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_07_G219_G219M26.o3480101 [2024-01-05 01:57:45,319] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_07_G219_G219M26.o3480101 [2024-01-05 01:57:45,319] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_07_G219_G219M26.o3480101 [2024-01-05 01:57:45,324] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_07_G219_G219M26.o3480101 [2024-01-05 01:57:45,342] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_07_G219_G219M26.o3480101 [2024-01-05 01:57:45,350] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-01-05 01:57:45,353] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-01-05 01:57:45,353] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-01-05 01:57:45,358] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-01-05 01:57:45,368] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: CollectInsertSizeMetrics_Stats.txt [2024-01-05 01:57:45,370] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: CollectInsertSizeMetrics_Plots.pdf [2024-01-05 01:57:45,378] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:45,381] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:45,381] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:45,388] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:45,402] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:45,597] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M40.o3478908 [2024-01-05 01:57:45,600] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M40.o3478908 [2024-01-05 01:57:45,600] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M40.o3478908 [2024-01-05 01:57:45,606] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M40.o3478908 [2024-01-05 01:57:45,624] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M40.o3478908 [2024-01-05 01:57:45,631] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M36.o3478904 [2024-01-05 01:57:45,634] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M36.o3478904 [2024-01-05 01:57:45,634] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M36.o3478904 [2024-01-05 01:57:45,640] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M36.o3478904 [2024-01-05 01:57:45,651] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M36.o3478904 [2024-01-05 01:57:45,658] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M3.o3478869 [2024-01-05 01:57:45,661] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M3.o3478869 [2024-01-05 01:57:45,662] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M3.o3478869 [2024-01-05 01:57:45,667] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M3.o3478869 [2024-01-05 01:57:45,678] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M3.o3478869 [2024-01-05 01:57:45,685] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M43.o3478911 [2024-01-05 01:57:45,688] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M43.o3478911 [2024-01-05 01:57:45,689] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M43.o3478911 [2024-01-05 01:57:45,694] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M43.o3478911 [2024-01-05 01:57:45,705] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M43.o3478911 [2024-01-05 01:57:45,712] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M16.o3478882 [2024-01-05 01:57:45,715] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M16.o3478882 [2024-01-05 01:57:45,715] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M16.o3478882 [2024-01-05 01:57:45,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M16.o3478882 [2024-01-05 01:57:45,739] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M16.o3478882 [2024-01-05 01:57:45,769] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M25.o3478891 [2024-01-05 01:57:45,772] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M25.o3478891 [2024-01-05 01:57:45,772] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M25.o3478891 [2024-01-05 01:57:45,778] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M25.o3478891 [2024-01-05 01:57:45,791] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M25.o3478891 [2024-01-05 01:57:45,798] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M17.o3478883 [2024-01-05 01:57:45,801] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M17.o3478883 [2024-01-05 01:57:45,801] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M17.o3478883 [2024-01-05 01:57:45,805] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M17.o3478883 [2024-01-05 01:57:45,815] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M17.o3478883 [2024-01-05 01:57:45,874] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M34.o3478902 [2024-01-05 01:57:45,877] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M34.o3478902 [2024-01-05 01:57:45,878] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M34.o3478902 [2024-01-05 01:57:45,886] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M34.o3478902 [2024-01-05 01:57:45,904] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M34.o3478902 [2024-01-05 01:57:45,911] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M18.o3478884 [2024-01-05 01:57:45,913] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M18.o3478884 [2024-01-05 01:57:45,914] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M18.o3478884 [2024-01-05 01:57:45,918] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M18.o3478884 [2024-01-05 01:57:45,931] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M18.o3478884 [2024-01-05 01:57:45,991] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M20.o3478886 [2024-01-05 01:57:45,995] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M20.o3478886 [2024-01-05 01:57:45,995] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M20.o3478886 [2024-01-05 01:57:46,001] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M20.o3478886 [2024-01-05 01:57:46,012] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M20.o3478886 [2024-01-05 01:57:46,041] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M46.o3478914 [2024-01-05 01:57:46,048] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M46.o3478914 [2024-01-05 01:57:46,049] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M46.o3478914 [2024-01-05 01:57:46,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M46.o3478914 [2024-01-05 01:57:46,066] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M46.o3478914 [2024-01-05 01:57:46,123] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M29.o3478895 [2024-01-05 01:57:46,127] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M29.o3478895 [2024-01-05 01:57:46,127] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M29.o3478895 [2024-01-05 01:57:46,132] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M29.o3478895 [2024-01-05 01:57:46,146] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M29.o3478895 [2024-01-05 01:57:46,159] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M49.o3478917 [2024-01-05 01:57:46,162] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M49.o3478917 [2024-01-05 01:57:46,162] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M49.o3478917 [2024-01-05 01:57:46,168] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M49.o3478917 [2024-01-05 01:57:46,177] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M49.o3478917 [2024-01-05 01:57:46,184] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M13.o3478879 [2024-01-05 01:57:46,186] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M13.o3478879 [2024-01-05 01:57:46,187] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M13.o3478879 [2024-01-05 01:57:46,193] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M13.o3478879 [2024-01-05 01:57:46,206] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M13.o3478879 [2024-01-05 01:57:46,266] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M14.o3478880 [2024-01-05 01:57:46,268] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M14.o3478880 [2024-01-05 01:57:46,269] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M14.o3478880 [2024-01-05 01:57:46,274] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M14.o3478880 [2024-01-05 01:57:46,284] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M14.o3478880 [2024-01-05 01:57:46,340] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M7.o3478873 [2024-01-05 01:57:46,343] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M7.o3478873 [2024-01-05 01:57:46,343] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M7.o3478873 [2024-01-05 01:57:46,348] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M7.o3478873 [2024-01-05 01:57:46,359] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M7.o3478873 [2024-01-05 01:57:46,370] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M6.o3478872 [2024-01-05 01:57:46,373] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M6.o3478872 [2024-01-05 01:57:46,373] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M6.o3478872 [2024-01-05 01:57:46,382] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M6.o3478872 [2024-01-05 01:57:46,396] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M6.o3478872 [2024-01-05 01:57:46,403] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M15.o3478881 [2024-01-05 01:57:46,406] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M15.o3478881 [2024-01-05 01:57:46,406] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M15.o3478881 [2024-01-05 01:57:46,413] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M15.o3478881 [2024-01-05 01:57:46,425] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M15.o3478881 [2024-01-05 01:57:46,624] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M8.o3478874 [2024-01-05 01:57:46,628] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M8.o3478874 [2024-01-05 01:57:46,628] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M8.o3478874 [2024-01-05 01:57:46,634] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M8.o3478874 [2024-01-05 01:57:46,647] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M8.o3478874 [2024-01-05 01:57:46,676] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M26.o3478892 [2024-01-05 01:57:46,686] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M26.o3478892 [2024-01-05 01:57:46,686] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M26.o3478892 [2024-01-05 01:57:46,695] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M26.o3478892 [2024-01-05 01:57:46,706] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M26.o3478892 [2024-01-05 01:57:46,712] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M41.o3478909 [2024-01-05 01:57:46,715] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M41.o3478909 [2024-01-05 01:57:46,715] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M41.o3478909 [2024-01-05 01:57:46,721] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M41.o3478909 [2024-01-05 01:57:46,732] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M41.o3478909 [2024-01-05 01:57:46,796] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M9.o3478875 [2024-01-05 01:57:46,798] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M9.o3478875 [2024-01-05 01:57:46,799] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M9.o3478875 [2024-01-05 01:57:46,804] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M9.o3478875 [2024-01-05 01:57:46,817] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M9.o3478875 [2024-01-05 01:57:46,851] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M48.o3478916 [2024-01-05 01:57:46,855] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M48.o3478916 [2024-01-05 01:57:46,855] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M48.o3478916 [2024-01-05 01:57:46,861] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M48.o3478916 [2024-01-05 01:57:46,875] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M48.o3478916 [2024-01-05 01:57:46,882] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M44.o3478912 [2024-01-05 01:57:46,885] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M44.o3478912 [2024-01-05 01:57:46,885] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M44.o3478912 [2024-01-05 01:57:46,896] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M44.o3478912 [2024-01-05 01:57:46,913] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M44.o3478912 [2024-01-05 01:57:46,942] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M10.o3478876 [2024-01-05 01:57:46,945] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M10.o3478876 [2024-01-05 01:57:46,945] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M10.o3478876 [2024-01-05 01:57:46,951] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M10.o3478876 [2024-01-05 01:57:46,962] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M10.o3478876 [2024-01-05 01:57:47,075] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M38.o3478906 [2024-01-05 01:57:47,078] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M38.o3478906 [2024-01-05 01:57:47,078] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M38.o3478906 [2024-01-05 01:57:47,083] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M38.o3478906 [2024-01-05 01:57:47,096] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M38.o3478906 [2024-01-05 01:57:47,107] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: RmStraightPk.qsub [2024-01-05 01:57:47,110] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: RmStraightPk.qsub [2024-01-05 01:57:47,110] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: RmStraightPk.qsub [2024-01-05 01:57:47,115] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: RmStraightPk.qsub [2024-01-05 01:57:47,131] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: RmStraightPk.qsub [2024-01-05 01:57:47,138] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:47,141] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:47,147] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:47,162] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M23.o3478889 [2024-01-05 01:57:47,164] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M23.o3478889 [2024-01-05 01:57:47,164] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M23.o3478889 [2024-01-05 01:57:47,172] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M23.o3478889 [2024-01-05 01:57:47,188] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M23.o3478889 [2024-01-05 01:57:47,193] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M45.o3478913 [2024-01-05 01:57:47,196] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M45.o3478913 [2024-01-05 01:57:47,197] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M45.o3478913 [2024-01-05 01:57:47,202] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M45.o3478913 [2024-01-05 01:57:47,221] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M45.o3478913 [2024-01-05 01:57:47,228] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M30.o3478896 [2024-01-05 01:57:47,230] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M30.o3478896 [2024-01-05 01:57:47,231] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M30.o3478896 [2024-01-05 01:57:47,236] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M30.o3478896 [2024-01-05 01:57:47,246] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M30.o3478896 [2024-01-05 01:57:47,252] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:47,256] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:47,261] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:47,277] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M4.o3478870 [2024-01-05 01:57:47,280] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M4.o3478870 [2024-01-05 01:57:47,280] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M4.o3478870 [2024-01-05 01:57:47,286] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M4.o3478870 [2024-01-05 01:57:47,296] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M4.o3478870 [2024-01-05 01:57:47,387] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M50.o3478918 [2024-01-05 01:57:47,390] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M50.o3478918 [2024-01-05 01:57:47,390] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M50.o3478918 [2024-01-05 01:57:47,395] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M50.o3478918 [2024-01-05 01:57:47,407] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M50.o3478918 [2024-01-05 01:57:47,471] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:47,474] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:47,485] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:47,493] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:47,508] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:47,552] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M37.o3478905 [2024-01-05 01:57:47,554] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M37.o3478905 [2024-01-05 01:57:47,555] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M37.o3478905 [2024-01-05 01:57:47,560] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M37.o3478905 [2024-01-05 01:57:47,579] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M37.o3478905 [2024-01-05 01:57:47,588] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M42.o3478910 [2024-01-05 01:57:47,592] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M42.o3478910 [2024-01-05 01:57:47,592] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M42.o3478910 [2024-01-05 01:57:47,597] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M42.o3478910 [2024-01-05 01:57:47,606] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M42.o3478910 [2024-01-05 01:57:47,664] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M47.o3478915 [2024-01-05 01:57:47,667] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M47.o3478915 [2024-01-05 01:57:47,668] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M47.o3478915 [2024-01-05 01:57:47,674] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M47.o3478915 [2024-01-05 01:57:47,684] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M47.o3478915 [2024-01-05 01:57:47,713] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M31.o3478898 [2024-01-05 01:57:47,716] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M31.o3478898 [2024-01-05 01:57:47,717] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M31.o3478898 [2024-01-05 01:57:47,722] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M31.o3478898 [2024-01-05 01:57:47,745] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M31.o3478898 [2024-01-05 01:57:47,811] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M1.o3478867 [2024-01-05 01:57:47,814] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M1.o3478867 [2024-01-05 01:57:47,814] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M1.o3478867 [2024-01-05 01:57:47,820] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M1.o3478867 [2024-01-05 01:57:47,832] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M1.o3478867 [2024-01-05 01:57:47,840] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M11.o3478877 [2024-01-05 01:57:47,848] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M11.o3478877 [2024-01-05 01:57:47,848] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M11.o3478877 [2024-01-05 01:57:47,854] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M11.o3478877 [2024-01-05 01:57:47,871] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M11.o3478877 [2024-01-05 01:57:47,903] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M2.o3478868 [2024-01-05 01:57:47,907] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M2.o3478868 [2024-01-05 01:57:47,907] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M2.o3478868 [2024-01-05 01:57:47,915] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M2.o3478868 [2024-01-05 01:57:47,929] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M2.o3478868 [2024-01-05 01:57:47,961] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M35.o3478903 [2024-01-05 01:57:47,962] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M35.o3478903 [2024-01-05 01:57:47,963] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M35.o3478903 [2024-01-05 01:57:47,968] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M35.o3478903 [2024-01-05 01:57:47,983] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M35.o3478903 [2024-01-05 01:57:47,990] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M32.o3478900 [2024-01-05 01:57:47,992] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M32.o3478900 [2024-01-05 01:57:47,993] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M32.o3478900 [2024-01-05 01:57:47,997] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M32.o3478900 [2024-01-05 01:57:48,007] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M32.o3478900 [2024-01-05 01:57:48,034] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M24.o3478890 [2024-01-05 01:57:48,037] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M24.o3478890 [2024-01-05 01:57:48,037] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M24.o3478890 [2024-01-05 01:57:48,042] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M24.o3478890 [2024-01-05 01:57:48,061] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M24.o3478890 [2024-01-05 01:57:48,068] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M5.o3478871 [2024-01-05 01:57:48,071] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M5.o3478871 [2024-01-05 01:57:48,072] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M5.o3478871 [2024-01-05 01:57:48,078] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M5.o3478871 [2024-01-05 01:57:48,088] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M5.o3478871 [2024-01-05 01:57:48,094] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M28.o3478894 [2024-01-05 01:57:48,098] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M28.o3478894 [2024-01-05 01:57:48,098] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 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[DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M39.o3478907 [2024-01-05 01:57:48,260] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_06a_G219_G219M21.o3478887 [2024-01-05 01:57:48,263] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_06a_G219_G219M21.o3478887 [2024-01-05 01:57:48,264] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_06a_G219_G219M21.o3478887 [2024-01-05 01:57:48,275] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_06a_G219_G219M21.o3478887 [2024-01-05 01:57:48,286] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M21.o3478887 [2024-01-05 01:57:48,293] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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limit: Step_06a_G219_G219M33.o3478901 [2024-01-05 01:57:48,365] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_06a_G219_G219M33.o3478901 [2024-01-05 01:57:48,377] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: remove_straight_peaks.py [2024-01-05 01:57:48,380] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: remove_straight_peaks.py [2024-01-05 01:57:48,380] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: remove_straight_peaks.py [2024-01-05 01:57:48,387] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: remove_straight_peaks.py [2024-01-05 01:57:48,398] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: remove_straight_peaks.py [2024-01-05 01:57:48,404] multiqc [DEBUG ] File ignored by ccs/v4 because 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[DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: StrgtPksRead_confirm_count.txt [2024-01-05 01:57:49,787] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: StrgtPksRead_confirm_count.txt [2024-01-05 01:57:49,827] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:49,830] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:49,830] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:49,837] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:49,849] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:49,862] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M24.o3480870 [2024-01-05 01:57:49,865] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M24.o3480870 [2024-01-05 01:57:49,866] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M24.o3480870 [2024-01-05 01:57:49,874] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M24.o3480870 [2024-01-05 01:57:49,888] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M24.o3480870 [2024-01-05 01:57:49,896] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M50.o3480896 [2024-01-05 01:57:49,900] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M50.o3480896 [2024-01-05 01:57:49,900] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M50.o3480896 [2024-01-05 01:57:49,904] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M50.o3480896 [2024-01-05 01:57:49,915] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M50.o3480896 [2024-01-05 01:57:49,921] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M6.o3480852 [2024-01-05 01:57:49,924] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M6.o3480852 [2024-01-05 01:57:49,925] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M6.o3480852 [2024-01-05 01:57:49,932] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M6.o3480852 [2024-01-05 01:57:49,951] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M6.o3480852 [2024-01-05 01:57:49,964] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M32.o3480878 [2024-01-05 01:57:49,968] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M32.o3480878 [2024-01-05 01:57:49,969] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M32.o3480878 [2024-01-05 01:57:49,977] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M32.o3480878 [2024-01-05 01:57:49,995] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M32.o3480878 [2024-01-05 01:57:50,002] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_normbigWig.sh [2024-01-05 01:57:50,005] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_normbigWig.sh [2024-01-05 01:57:50,010] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_normbigWig.sh [2024-01-05 01:57:50,025] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M8.o3480854 [2024-01-05 01:57:50,028] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M8.o3480854 [2024-01-05 01:57:50,028] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M8.o3480854 [2024-01-05 01:57:50,034] multiqc [DEBUG ] File ignored by 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ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M20.o3480866 [2024-01-05 01:57:50,211] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M3.o3480849 [2024-01-05 01:57:50,213] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M3.o3480849 [2024-01-05 01:57:50,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M3.o3480849 [2024-01-05 01:57:50,219] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M3.o3480849 [2024-01-05 01:57:50,232] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M3.o3480849 [2024-01-05 01:57:50,240] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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Step_14_G219_G219M14.o3480860 [2024-01-05 01:57:50,328] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M14.o3480860 [2024-01-05 01:57:50,336] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M35.o3480881 [2024-01-05 01:57:50,339] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M35.o3480881 [2024-01-05 01:57:50,340] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M35.o3480881 [2024-01-05 01:57:50,344] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M35.o3480881 [2024-01-05 01:57:50,355] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M35.o3480881 [2024-01-05 01:57:50,362] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M12.o3480858 [2024-01-05 01:57:50,366] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M12.o3480858 [2024-01-05 01:57:50,367] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M12.o3480858 [2024-01-05 01:57:50,372] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M12.o3480858 [2024-01-05 01:57:50,396] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M12.o3480858 [2024-01-05 01:57:50,404] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M41.o3480887 [2024-01-05 01:57:50,407] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M41.o3480887 [2024-01-05 01:57:50,408] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M41.o3480887 [2024-01-05 01:57:50,414] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M41.o3480887 [2024-01-05 01:57:50,425] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M41.o3480887 [2024-01-05 01:57:50,431] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M43.o3480889 [2024-01-05 01:57:50,433] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M43.o3480889 [2024-01-05 01:57:50,433] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M43.o3480889 [2024-01-05 01:57:50,439] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M43.o3480889 [2024-01-05 01:57:50,449] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M43.o3480889 [2024-01-05 01:57:50,456] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M26.o3480872 [2024-01-05 01:57:50,458] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M26.o3480872 [2024-01-05 01:57:50,458] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M26.o3480872 [2024-01-05 01:57:50,464] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M26.o3480872 [2024-01-05 01:57:50,479] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M26.o3480872 [2024-01-05 01:57:50,485] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M49.o3480895 [2024-01-05 01:57:50,493] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M49.o3480895 [2024-01-05 01:57:50,493] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M49.o3480895 [2024-01-05 01:57:50,500] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M49.o3480895 [2024-01-05 01:57:50,512] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M49.o3480895 [2024-01-05 01:57:50,518] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M9.o3480855 [2024-01-05 01:57:50,521] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M9.o3480855 [2024-01-05 01:57:50,521] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M9.o3480855 [2024-01-05 01:57:50,527] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M9.o3480855 [2024-01-05 01:57:50,539] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M9.o3480855 [2024-01-05 01:57:50,546] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M44.o3480890 [2024-01-05 01:57:50,549] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M44.o3480890 [2024-01-05 01:57:50,549] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M44.o3480890 [2024-01-05 01:57:50,554] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M44.o3480890 [2024-01-05 01:57:50,564] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M44.o3480890 [2024-01-05 01:57:50,570] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M22.o3480868 [2024-01-05 01:57:50,573] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M22.o3480868 [2024-01-05 01:57:50,574] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M22.o3480868 [2024-01-05 01:57:50,579] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M22.o3480868 [2024-01-05 01:57:50,590] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M22.o3480868 [2024-01-05 01:57:50,602] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M48.o3480894 [2024-01-05 01:57:50,605] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M48.o3480894 [2024-01-05 01:57:50,605] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M48.o3480894 [2024-01-05 01:57:50,610] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M48.o3480894 [2024-01-05 01:57:50,620] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M48.o3480894 [2024-01-05 01:57:50,628] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M37.o3480883 [2024-01-05 01:57:50,630] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M37.o3480883 [2024-01-05 01:57:50,630] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M37.o3480883 [2024-01-05 01:57:50,636] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M37.o3480883 [2024-01-05 01:57:50,647] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M37.o3480883 [2024-01-05 01:57:50,654] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M33.o3480879 [2024-01-05 01:57:50,657] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M33.o3480879 [2024-01-05 01:57:50,657] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M33.o3480879 [2024-01-05 01:57:50,663] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M33.o3480879 [2024-01-05 01:57:50,672] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M33.o3480879 [2024-01-05 01:57:50,679] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M18.o3480864 [2024-01-05 01:57:50,681] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M18.o3480864 [2024-01-05 01:57:50,682] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M18.o3480864 [2024-01-05 01:57:50,686] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M18.o3480864 [2024-01-05 01:57:50,695] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M18.o3480864 [2024-01-05 01:57:50,708] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M39.o3480885 [2024-01-05 01:57:50,710] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M39.o3480885 [2024-01-05 01:57:50,711] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M39.o3480885 [2024-01-05 01:57:50,719] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M39.o3480885 [2024-01-05 01:57:50,734] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M39.o3480885 [2024-01-05 01:57:50,743] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M29.o3480875 [2024-01-05 01:57:50,747] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M29.o3480875 [2024-01-05 01:57:50,748] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M29.o3480875 [2024-01-05 01:57:50,754] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M29.o3480875 [2024-01-05 01:57:50,767] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M29.o3480875 [2024-01-05 01:57:50,773] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M17.o3480863 [2024-01-05 01:57:50,776] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M17.o3480863 [2024-01-05 01:57:50,777] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M17.o3480863 [2024-01-05 01:57:50,782] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M17.o3480863 [2024-01-05 01:57:50,794] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M17.o3480863 [2024-01-05 01:57:50,801] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M31.o3480877 [2024-01-05 01:57:50,804] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M31.o3480877 [2024-01-05 01:57:50,804] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M31.o3480877 [2024-01-05 01:57:50,815] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M31.o3480877 [2024-01-05 01:57:50,828] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M31.o3480877 [2024-01-05 01:57:50,834] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M7.o3480853 [2024-01-05 01:57:50,837] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M7.o3480853 [2024-01-05 01:57:50,837] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M7.o3480853 [2024-01-05 01:57:50,842] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M7.o3480853 [2024-01-05 01:57:50,852] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M7.o3480853 [2024-01-05 01:57:50,859] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M28.o3480874 [2024-01-05 01:57:50,862] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M28.o3480874 [2024-01-05 01:57:50,862] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M28.o3480874 [2024-01-05 01:57:50,868] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M28.o3480874 [2024-01-05 01:57:50,878] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M28.o3480874 [2024-01-05 01:57:50,884] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:50,887] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:50,893] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:50,910] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M45.o3480891 [2024-01-05 01:57:50,918] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M45.o3480891 [2024-01-05 01:57:50,919] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M45.o3480891 [2024-01-05 01:57:50,924] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M45.o3480891 [2024-01-05 01:57:50,939] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M45.o3480891 [2024-01-05 01:57:50,946] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:50,948] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:50,949] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:50,954] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:50,963] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:50,969] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M30.o3480876 [2024-01-05 01:57:50,971] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M30.o3480876 [2024-01-05 01:57:50,971] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M30.o3480876 [2024-01-05 01:57:50,977] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M30.o3480876 [2024-01-05 01:57:50,990] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M30.o3480876 [2024-01-05 01:57:50,996] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M42.o3480888 [2024-01-05 01:57:50,998] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M42.o3480888 [2024-01-05 01:57:50,998] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M42.o3480888 [2024-01-05 01:57:51,003] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M42.o3480888 [2024-01-05 01:57:51,023] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M42.o3480888 [2024-01-05 01:57:51,030] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M47.o3480893 [2024-01-05 01:57:51,031] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M47.o3480893 [2024-01-05 01:57:51,032] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M47.o3480893 [2024-01-05 01:57:51,038] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M47.o3480893 [2024-01-05 01:57:51,051] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M47.o3480893 [2024-01-05 01:57:51,057] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M16.o3480862 [2024-01-05 01:57:51,060] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M16.o3480862 [2024-01-05 01:57:51,060] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M16.o3480862 [2024-01-05 01:57:51,065] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M16.o3480862 [2024-01-05 01:57:51,075] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M16.o3480862 [2024-01-05 01:57:51,083] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M13.o3480859 [2024-01-05 01:57:51,087] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M13.o3480859 [2024-01-05 01:57:51,088] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M13.o3480859 [2024-01-05 01:57:51,096] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M13.o3480859 [2024-01-05 01:57:51,109] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M13.o3480859 [2024-01-05 01:57:51,117] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M40.o3480886 [2024-01-05 01:57:51,120] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M40.o3480886 [2024-01-05 01:57:51,120] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M40.o3480886 [2024-01-05 01:57:51,131] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M40.o3480886 [2024-01-05 01:57:51,142] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M40.o3480886 [2024-01-05 01:57:51,149] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M10.o3480856 [2024-01-05 01:57:51,151] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M10.o3480856 [2024-01-05 01:57:51,152] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M10.o3480856 [2024-01-05 01:57:51,158] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M10.o3480856 [2024-01-05 01:57:51,171] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M10.o3480856 [2024-01-05 01:57:51,178] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: normbigWig.qsub [2024-01-05 01:57:51,181] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: normbigWig.qsub [2024-01-05 01:57:51,181] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: normbigWig.qsub [2024-01-05 01:57:51,186] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: normbigWig.qsub [2024-01-05 01:57:51,201] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: normbigWig.qsub [2024-01-05 01:57:51,210] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M46.o3480892 [2024-01-05 01:57:51,214] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M46.o3480892 [2024-01-05 01:57:51,215] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M46.o3480892 [2024-01-05 01:57:51,224] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M46.o3480892 [2024-01-05 01:57:51,245] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M46.o3480892 [2024-01-05 01:57:51,253] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M5.o3480851 [2024-01-05 01:57:51,255] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M5.o3480851 [2024-01-05 01:57:51,256] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M5.o3480851 [2024-01-05 01:57:51,261] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M5.o3480851 [2024-01-05 01:57:51,276] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M5.o3480851 [2024-01-05 01:57:51,283] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M34.o3480880 [2024-01-05 01:57:51,286] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M34.o3480880 [2024-01-05 01:57:51,286] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M34.o3480880 [2024-01-05 01:57:51,291] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M34.o3480880 [2024-01-05 01:57:51,301] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M34.o3480880 [2024-01-05 01:57:51,308] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M15.o3480861 [2024-01-05 01:57:51,311] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M15.o3480861 [2024-01-05 01:57:51,311] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M15.o3480861 [2024-01-05 01:57:51,317] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M15.o3480861 [2024-01-05 01:57:51,331] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M15.o3480861 [2024-01-05 01:57:51,343] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M38.o3480884 [2024-01-05 01:57:51,346] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M38.o3480884 [2024-01-05 01:57:51,347] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M38.o3480884 [2024-01-05 01:57:51,354] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M38.o3480884 [2024-01-05 01:57:51,367] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M38.o3480884 [2024-01-05 01:57:51,373] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M27.o3480873 [2024-01-05 01:57:51,376] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M27.o3480873 [2024-01-05 01:57:51,376] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M27.o3480873 [2024-01-05 01:57:51,382] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M27.o3480873 [2024-01-05 01:57:51,392] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M27.o3480873 [2024-01-05 01:57:51,399] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M25.o3480871 [2024-01-05 01:57:51,401] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M25.o3480871 [2024-01-05 01:57:51,402] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M25.o3480871 [2024-01-05 01:57:51,407] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M25.o3480871 [2024-01-05 01:57:51,417] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M25.o3480871 [2024-01-05 01:57:51,422] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M11.o3480857 [2024-01-05 01:57:51,425] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M11.o3480857 [2024-01-05 01:57:51,425] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M11.o3480857 [2024-01-05 01:57:51,431] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M11.o3480857 [2024-01-05 01:57:51,452] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M11.o3480857 [2024-01-05 01:57:51,462] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_14_G219_G219M23.o3480869 [2024-01-05 01:57:51,465] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_14_G219_G219M23.o3480869 [2024-01-05 01:57:51,465] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_14_G219_G219M23.o3480869 [2024-01-05 01:57:51,471] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_14_G219_G219M23.o3480869 [2024-01-05 01:57:51,486] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_14_G219_G219M23.o3480869 [2024-01-05 01:57:51,496] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2024-01-05 01:57:51,500] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2024-01-05 01:57:51,500] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2024-01-05 01:57:51,505] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2024-01-05 01:57:51,520] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: BAM_to_WIG.sh [2024-01-05 01:57:51,559] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bigWigToWig [2024-01-05 01:57:51,562] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bigWigToWig [2024-01-05 01:57:51,563] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bigWigToWig [2024-01-05 01:57:51,569] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bigWigToWig [2024-01-05 01:57:51,569] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bigWigToWig [2024-01-05 01:57:51,578] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bigWigToWig [2024-01-05 01:57:51,586] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bedGraphToBigWig [2024-01-05 01:57:51,590] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bedGraphToBigWig [2024-01-05 01:57:51,590] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bedGraphToBigWig [2024-01-05 01:57:51,596] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bedGraphToBigWig [2024-01-05 01:57:51,596] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bedGraphToBigWig [2024-01-05 01:57:51,603] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bedGraphToBigWig [2024-01-05 01:57:51,664] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Norm_Factors.txt [2024-01-05 01:57:51,668] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Norm_Factors.txt [2024-01-05 01:57:51,673] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Norm_Factors.txt [2024-01-05 01:57:51,691] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:51,694] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:51,694] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:51,699] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:51,726] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:51,736] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M45.o3480568 [2024-01-05 01:57:51,739] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M45.o3480568 [2024-01-05 01:57:51,739] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M45.o3480568 [2024-01-05 01:57:51,745] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M45.o3480568 [2024-01-05 01:57:51,774] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M45.o3480568 [2024-01-05 01:57:51,781] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M22.o3480543 [2024-01-05 01:57:51,784] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M22.o3480543 [2024-01-05 01:57:51,784] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M22.o3480543 [2024-01-05 01:57:51,790] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M22.o3480543 [2024-01-05 01:57:51,805] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M22.o3480543 [2024-01-05 01:57:51,812] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M43.o3480566 [2024-01-05 01:57:51,815] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M43.o3480566 [2024-01-05 01:57:51,816] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M43.o3480566 [2024-01-05 01:57:51,821] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M43.o3480566 [2024-01-05 01:57:51,837] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M43.o3480566 [2024-01-05 01:57:51,844] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M24.o3480547 [2024-01-05 01:57:51,847] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M24.o3480547 [2024-01-05 01:57:51,847] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M24.o3480547 [2024-01-05 01:57:51,852] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M24.o3480547 [2024-01-05 01:57:51,875] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M24.o3480547 [2024-01-05 01:57:51,910] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M41.o3480564 [2024-01-05 01:57:51,913] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M41.o3480564 [2024-01-05 01:57:51,914] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M41.o3480564 [2024-01-05 01:57:51,919] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M41.o3480564 [2024-01-05 01:57:51,936] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M41.o3480564 [2024-01-05 01:57:51,943] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER.qsub [2024-01-05 01:57:51,947] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER.qsub [2024-01-05 01:57:51,948] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER.qsub [2024-01-05 01:57:51,956] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER.qsub [2024-01-05 01:57:51,993] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER.qsub [2024-01-05 01:57:52,001] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M44.o3480567 [2024-01-05 01:57:52,005] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M44.o3480567 [2024-01-05 01:57:52,005] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M44.o3480567 [2024-01-05 01:57:52,010] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M44.o3480567 [2024-01-05 01:57:52,038] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M44.o3480567 [2024-01-05 01:57:52,046] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M6.o3480527 [2024-01-05 01:57:52,049] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M6.o3480527 [2024-01-05 01:57:52,049] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M6.o3480527 [2024-01-05 01:57:52,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M6.o3480527 [2024-01-05 01:57:52,070] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M6.o3480527 [2024-01-05 01:57:52,083] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M9.o3480530 [2024-01-05 01:57:52,086] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M9.o3480530 [2024-01-05 01:57:52,086] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M9.o3480530 [2024-01-05 01:57:52,092] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M9.o3480530 [2024-01-05 01:57:52,109] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M9.o3480530 [2024-01-05 01:57:52,116] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M38.o3480561 [2024-01-05 01:57:52,120] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M38.o3480561 [2024-01-05 01:57:52,120] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M38.o3480561 [2024-01-05 01:57:52,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M38.o3480561 [2024-01-05 01:57:52,152] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M38.o3480561 [2024-01-05 01:57:52,159] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M50.o3480573 [2024-01-05 01:57:52,162] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M50.o3480573 [2024-01-05 01:57:52,162] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M50.o3480573 [2024-01-05 01:57:52,167] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M50.o3480573 [2024-01-05 01:57:52,193] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M50.o3480573 [2024-01-05 01:57:52,199] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M49.o3480572 [2024-01-05 01:57:52,201] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M49.o3480572 [2024-01-05 01:57:52,201] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M49.o3480572 [2024-01-05 01:57:52,206] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M49.o3480572 [2024-01-05 01:57:52,222] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M49.o3480572 [2024-01-05 01:57:52,229] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M47.o3480570 [2024-01-05 01:57:52,232] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M47.o3480570 [2024-01-05 01:57:52,232] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M47.o3480570 [2024-01-05 01:57:52,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M47.o3480570 [2024-01-05 01:57:52,253] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M47.o3480570 [2024-01-05 01:57:52,260] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M42.o3480565 [2024-01-05 01:57:52,262] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M42.o3480565 [2024-01-05 01:57:52,262] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M42.o3480565 [2024-01-05 01:57:52,267] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M42.o3480565 [2024-01-05 01:57:52,282] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M42.o3480565 [2024-01-05 01:57:52,294] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M32.o3480555 [2024-01-05 01:57:52,297] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M32.o3480555 [2024-01-05 01:57:52,298] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M32.o3480555 [2024-01-05 01:57:52,303] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M32.o3480555 [2024-01-05 01:57:52,324] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M32.o3480555 [2024-01-05 01:57:52,332] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M33.o3480556 [2024-01-05 01:57:52,335] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M33.o3480556 [2024-01-05 01:57:52,335] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M33.o3480556 [2024-01-05 01:57:52,341] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M33.o3480556 [2024-01-05 01:57:52,358] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M33.o3480556 [2024-01-05 01:57:52,364] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M34.o3480557 [2024-01-05 01:57:52,367] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M34.o3480557 [2024-01-05 01:57:52,368] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M34.o3480557 [2024-01-05 01:57:52,376] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M34.o3480557 [2024-01-05 01:57:52,404] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M34.o3480557 [2024-01-05 01:57:52,411] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M17.o3480538 [2024-01-05 01:57:52,414] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M17.o3480538 [2024-01-05 01:57:52,414] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M17.o3480538 [2024-01-05 01:57:52,420] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M17.o3480538 [2024-01-05 01:57:52,438] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M17.o3480538 [2024-01-05 01:57:52,446] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M31.o3480554 [2024-01-05 01:57:52,449] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M31.o3480554 [2024-01-05 01:57:52,449] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M31.o3480554 [2024-01-05 01:57:52,455] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M31.o3480554 [2024-01-05 01:57:52,473] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M31.o3480554 [2024-01-05 01:57:52,481] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M19.o3480540 [2024-01-05 01:57:52,497] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M19.o3480540 [2024-01-05 01:57:52,497] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M19.o3480540 [2024-01-05 01:57:52,512] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M19.o3480540 [2024-01-05 01:57:52,535] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M19.o3480540 [2024-01-05 01:57:52,542] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M7.o3480528 [2024-01-05 01:57:52,546] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M7.o3480528 [2024-01-05 01:57:52,546] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M7.o3480528 [2024-01-05 01:57:52,552] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M7.o3480528 [2024-01-05 01:57:52,570] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M7.o3480528 [2024-01-05 01:57:52,577] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M37.o3480560 [2024-01-05 01:57:52,580] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M37.o3480560 [2024-01-05 01:57:52,580] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M37.o3480560 [2024-01-05 01:57:52,587] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M37.o3480560 [2024-01-05 01:57:52,614] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M37.o3480560 [2024-01-05 01:57:52,624] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M26.o3480549 [2024-01-05 01:57:52,628] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M26.o3480549 [2024-01-05 01:57:52,629] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M26.o3480549 [2024-01-05 01:57:52,634] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M26.o3480549 [2024-01-05 01:57:52,651] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M26.o3480549 [2024-01-05 01:57:52,660] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M16.o3480537 [2024-01-05 01:57:52,662] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M16.o3480537 [2024-01-05 01:57:52,663] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M16.o3480537 [2024-01-05 01:57:52,667] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M16.o3480537 [2024-01-05 01:57:52,683] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M16.o3480537 [2024-01-05 01:57:52,691] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M14.o3480535 [2024-01-05 01:57:52,693] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M14.o3480535 [2024-01-05 01:57:52,693] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M14.o3480535 [2024-01-05 01:57:52,699] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M14.o3480535 [2024-01-05 01:57:52,721] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M14.o3480535 [2024-01-05 01:57:52,727] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M4.o3480525 [2024-01-05 01:57:52,729] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M4.o3480525 [2024-01-05 01:57:52,729] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M4.o3480525 [2024-01-05 01:57:52,734] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M4.o3480525 [2024-01-05 01:57:52,753] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M4.o3480525 [2024-01-05 01:57:52,760] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M18.o3480539 [2024-01-05 01:57:52,763] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M18.o3480539 [2024-01-05 01:57:52,763] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M18.o3480539 [2024-01-05 01:57:52,770] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M18.o3480539 [2024-01-05 01:57:52,797] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M18.o3480539 [2024-01-05 01:57:52,805] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M28.o3480551 [2024-01-05 01:57:52,808] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M28.o3480551 [2024-01-05 01:57:52,808] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M28.o3480551 [2024-01-05 01:57:52,814] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M28.o3480551 [2024-01-05 01:57:52,837] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M28.o3480551 [2024-01-05 01:57:52,843] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M2.o3480523 [2024-01-05 01:57:52,846] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M2.o3480523 [2024-01-05 01:57:52,846] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M2.o3480523 [2024-01-05 01:57:52,850] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M2.o3480523 [2024-01-05 01:57:52,866] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M2.o3480523 [2024-01-05 01:57:52,873] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M11.o3480532 [2024-01-05 01:57:52,876] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M11.o3480532 [2024-01-05 01:57:52,876] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M11.o3480532 [2024-01-05 01:57:52,881] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M11.o3480532 [2024-01-05 01:57:52,897] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M11.o3480532 [2024-01-05 01:57:52,905] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M30.o3480553 [2024-01-05 01:57:52,908] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M30.o3480553 [2024-01-05 01:57:52,908] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M30.o3480553 [2024-01-05 01:57:52,913] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M30.o3480553 [2024-01-05 01:57:52,934] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M30.o3480553 [2024-01-05 01:57:52,941] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M36.o3480559 [2024-01-05 01:57:52,944] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M36.o3480559 [2024-01-05 01:57:52,944] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M36.o3480559 [2024-01-05 01:57:52,950] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M36.o3480559 [2024-01-05 01:57:52,966] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M36.o3480559 [2024-01-05 01:57:52,973] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_macs2.sh [2024-01-05 01:57:52,976] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_macs2.sh [2024-01-05 01:57:52,983] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_macs2.sh [2024-01-05 01:57:52,999] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M48.o3480571 [2024-01-05 01:57:53,001] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M48.o3480571 [2024-01-05 01:57:53,001] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M48.o3480571 [2024-01-05 01:57:53,006] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M48.o3480571 [2024-01-05 01:57:53,022] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M48.o3480571 [2024-01-05 01:57:53,030] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M35.o3480558 [2024-01-05 01:57:53,038] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M35.o3480558 [2024-01-05 01:57:53,038] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M35.o3480558 [2024-01-05 01:57:53,044] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M35.o3480558 [2024-01-05 01:57:53,068] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M35.o3480558 [2024-01-05 01:57:53,075] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:53,078] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:53,082] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:53,096] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M23.o3480545 [2024-01-05 01:57:53,099] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M23.o3480545 [2024-01-05 01:57:53,100] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M23.o3480545 [2024-01-05 01:57:53,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M23.o3480545 [2024-01-05 01:57:53,124] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M23.o3480545 [2024-01-05 01:57:53,132] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M25.o3480548 [2024-01-05 01:57:53,136] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M25.o3480548 [2024-01-05 01:57:53,137] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M25.o3480548 [2024-01-05 01:57:53,151] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M25.o3480548 [2024-01-05 01:57:53,174] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M25.o3480548 [2024-01-05 01:57:53,182] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:53,187] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:53,196] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:53,211] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M12.o3480533 [2024-01-05 01:57:53,212] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M12.o3480533 [2024-01-05 01:57:53,213] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M12.o3480533 [2024-01-05 01:57:53,217] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M12.o3480533 [2024-01-05 01:57:53,232] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M12.o3480533 [2024-01-05 01:57:53,238] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M15.o3480536 [2024-01-05 01:57:53,240] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M15.o3480536 [2024-01-05 01:57:53,240] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M15.o3480536 [2024-01-05 01:57:53,250] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M15.o3480536 [2024-01-05 01:57:53,272] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M15.o3480536 [2024-01-05 01:57:53,277] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:53,279] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:53,283] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:53,296] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M13.o3480534 [2024-01-05 01:57:53,297] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M13.o3480534 [2024-01-05 01:57:53,298] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M13.o3480534 [2024-01-05 01:57:53,301] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M13.o3480534 [2024-01-05 01:57:53,316] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M13.o3480534 [2024-01-05 01:57:53,322] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M10.o3480531 [2024-01-05 01:57:53,324] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M10.o3480531 [2024-01-05 01:57:53,324] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M10.o3480531 [2024-01-05 01:57:53,328] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M10.o3480531 [2024-01-05 01:57:53,348] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M10.o3480531 [2024-01-05 01:57:53,367] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M3.o3480524 [2024-01-05 01:57:53,369] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M3.o3480524 [2024-01-05 01:57:53,370] multiqc [DEBUG ] File ignored by lima/summary because it exceeded 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01:57:53,422] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M8.o3480529 [2024-01-05 01:57:53,428] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08c_G219_G219M29.o3480552 [2024-01-05 01:57:53,430] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08c_G219_G219M29.o3480552 [2024-01-05 01:57:53,430] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08c_G219_G219M29.o3480552 [2024-01-05 01:57:53,433] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08c_G219_G219M29.o3480552 [2024-01-05 01:57:53,449] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08c_G219_G219M29.o3480552 [2024-01-05 01:57:53,454] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search 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filesize limit: Step_08c_G219_G219M20.o3480541 [2024-01-05 01:57:53,717] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: README.pdf [2024-01-05 01:57:53,723] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER-df.sh [2024-01-05 01:57:53,727] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: SICER-df.sh [2024-01-05 01:57:53,727] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: SICER-df.sh [2024-01-05 01:57:53,733] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: SICER-df.sh [2024-01-05 01:57:53,747] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER-df.sh [2024-01-05 01:57:53,755] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER-rb.sh [2024-01-05 01:57:53,757] multiqc [DEBUG ] File 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[2024-01-05 01:57:54,006] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: GenomeData.py [2024-01-05 01:57:54,008] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: GenomeData.py [2024-01-05 01:57:54,008] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: GenomeData.py [2024-01-05 01:57:54,015] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: GenomeData.py [2024-01-05 01:57:54,033] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: GenomeData.py [2024-01-05 01:57:54,038] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: get_total_tag_counts.py [2024-01-05 01:57:54,041] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: get_total_tag_counts.py [2024-01-05 01:57:54,047] 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exceeded search pattern filesize limit: Utility.py [2024-01-05 01:57:54,170] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Utility.py [2024-01-05 01:57:54,174] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Utility.py [2024-01-05 01:57:54,204] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BED.py [2024-01-05 01:57:54,206] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: BED.py [2024-01-05 01:57:54,207] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BED.py [2024-01-05 01:57:54,211] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BED.py [2024-01-05 01:57:54,228] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: BED.py [2024-01-05 01:57:54,236] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2024-01-05 01:57:54,240] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2024-01-05 01:57:54,240] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2024-01-05 01:57:54,247] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2024-01-05 01:57:54,259] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: associate_tags_with_regions.py [2024-01-05 01:57:54,268] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: islands_statistics_pr.py [2024-01-05 01:57:54,272] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search 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01:57:54,694] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: run-make-graph-file-by-chrom.py [2024-01-05 01:57:54,698] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: run-make-graph-file-by-chrom.py [2024-01-05 01:57:54,707] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: run-make-graph-file-by-chrom.py [2024-01-05 01:57:54,724] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2024-01-05 01:57:54,733] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2024-01-05 01:57:54,733] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: compare_two_libraries_on_islands.py [2024-01-05 01:57:54,739] multiqc [DEBUG ] File ignored by 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ignored by nanostat because it exceeded search pattern filesize limit: associate_tags_with_chip_and_control_w_fc_q.py [2024-01-05 01:57:54,802] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: remove_redundant_reads.py [2024-01-05 01:57:54,805] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: remove_redundant_reads.py [2024-01-05 01:57:54,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: remove_redundant_reads.py [2024-01-05 01:57:54,829] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:54,838] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:54,838] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:54,844] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:54,854] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:54,860] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:54,863] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:54,863] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:54,870] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:54,887] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:54,893] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2024-01-05 01:57:54,896] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2024-01-05 01:57:54,901] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2024-01-05 01:57:54,951] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2024-01-05 01:57:54,956] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2024-01-05 01:57:54,980] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:54,983] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:54,984] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:54,989] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:55,003] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:55,034] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BED_to_WIG.sh [2024-01-05 01:57:55,037] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BED_to_WIG.sh [2024-01-05 01:57:55,043] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BED_to_WIG.sh [2024-01-05 01:57:55,097] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,099] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,099] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,104] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,104] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,105] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,105] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,105] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:55,105] multiqc [DEBUG ] 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[DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:55,262] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:55,263] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:55,268] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:55,281] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:55,306] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: SICER_Peak_Width.txt [2024-01-05 01:57:55,310] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search 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pattern filesize limit: SICER_Stats.txt [2024-01-05 01:57:55,356] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: SICER_Stats.txt [2024-01-05 01:57:55,357] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,357] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,357] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,357] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,358] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,358] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,358] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,358] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,358] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,358] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,359] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,359] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,360] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,360] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,360] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,366] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,367] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,367] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,368] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,369] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,369] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,370] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,370] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,370] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,371] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,371] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,371] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,372] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,372] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,372] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Chr_Peak_Counts.pdf [2024-01-05 01:57:55,373] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,373] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,373] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,374] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,374] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,374] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,375] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,375] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,375] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,375] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,376] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,376] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,376] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,377] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: 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ignore pattern: G219M6-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,380] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,380] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,380] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,380] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,381] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,382] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,382] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,382] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,382] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,383] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,383] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,383] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,383] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,383] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,384] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,385] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,385] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,385] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,385] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,386] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,386] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,386] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,386] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,387] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,387] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,387] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,388] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,388] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,388] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,388] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,389] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,390] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,390] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,390] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,390] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,391] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2-W400-G2400-E100.scoreisland.bed [2024-01-05 01:57:55,391] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2024-01-05 01:57:55,398] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Generate_Tracks.sh [2024-01-05 01:57:55,400] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Generate_Tracks.sh [2024-01-05 01:57:55,401] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Generate_Tracks.sh [2024-01-05 01:57:55,406] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Generate_Tracks.sh [2024-01-05 01:57:55,428] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Generate_Tracks.sh [2024-01-05 01:57:55,437] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2024-01-05 01:57:55,442] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2024-01-05 01:57:55,442] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2024-01-05 01:57:55,448] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2024-01-05 01:57:55,460] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: README_Generate_Tracks.sh [2024-01-05 01:57:55,473] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:55,478] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:55,486] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:55,497] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: chrom_state_legend.pdf [2024-01-05 01:57:55,528] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:55,532] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:55,532] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:55,537] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:55,555] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Summarize_Jobs.sh [2024-01-05 01:57:55,563] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M49.o3480269 [2024-01-05 01:57:55,566] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M49.o3480269 [2024-01-05 01:57:55,566] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M49.o3480269 [2024-01-05 01:57:55,578] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M49.o3480269 [2024-01-05 01:57:55,595] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M49.o3480269 [2024-01-05 01:57:55,603] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M13.o3480230 [2024-01-05 01:57:55,607] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M13.o3480230 [2024-01-05 01:57:55,607] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M13.o3480230 [2024-01-05 01:57:55,614] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M13.o3480230 [2024-01-05 01:57:55,642] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M13.o3480230 [2024-01-05 01:57:55,650] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M37.o3480256 [2024-01-05 01:57:55,653] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M37.o3480256 [2024-01-05 01:57:55,653] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M37.o3480256 [2024-01-05 01:57:55,659] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M37.o3480256 [2024-01-05 01:57:55,674] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M37.o3480256 [2024-01-05 01:57:55,687] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M36.o3480254 [2024-01-05 01:57:55,690] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M36.o3480254 [2024-01-05 01:57:55,690] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M36.o3480254 [2024-01-05 01:57:55,695] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M36.o3480254 [2024-01-05 01:57:55,714] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M36.o3480254 [2024-01-05 01:57:55,723] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M11.o3480228 [2024-01-05 01:57:55,726] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M11.o3480228 [2024-01-05 01:57:55,726] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M11.o3480228 [2024-01-05 01:57:55,732] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M11.o3480228 [2024-01-05 01:57:55,751] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M11.o3480228 [2024-01-05 01:57:55,758] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: macs2.qsub [2024-01-05 01:57:55,760] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: macs2.qsub [2024-01-05 01:57:55,761] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: macs2.qsub [2024-01-05 01:57:55,766] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: macs2.qsub [2024-01-05 01:57:55,791] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: macs2.qsub [2024-01-05 01:57:55,800] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M9.o3480226 [2024-01-05 01:57:55,804] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M9.o3480226 [2024-01-05 01:57:55,804] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M9.o3480226 [2024-01-05 01:57:55,810] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M9.o3480226 [2024-01-05 01:57:55,828] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M9.o3480226 [2024-01-05 01:57:55,835] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M23.o3480240 [2024-01-05 01:57:55,837] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M23.o3480240 [2024-01-05 01:57:55,838] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M23.o3480240 [2024-01-05 01:57:55,843] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M23.o3480240 [2024-01-05 01:57:55,858] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M23.o3480240 [2024-01-05 01:57:55,867] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M1.o3480218 [2024-01-05 01:57:55,870] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M1.o3480218 [2024-01-05 01:57:55,870] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M1.o3480218 [2024-01-05 01:57:55,876] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M1.o3480218 [2024-01-05 01:57:55,897] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M1.o3480218 [2024-01-05 01:57:55,904] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M35.o3480252 [2024-01-05 01:57:55,908] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M35.o3480252 [2024-01-05 01:57:55,908] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M35.o3480252 [2024-01-05 01:57:55,914] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M35.o3480252 [2024-01-05 01:57:55,932] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M35.o3480252 [2024-01-05 01:57:55,939] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M31.o3480248 [2024-01-05 01:57:55,942] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M31.o3480248 [2024-01-05 01:57:55,942] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M31.o3480248 [2024-01-05 01:57:55,948] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M31.o3480248 [2024-01-05 01:57:55,969] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M31.o3480248 [2024-01-05 01:57:55,976] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M33.o3480250 [2024-01-05 01:57:55,979] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M33.o3480250 [2024-01-05 01:57:55,980] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M33.o3480250 [2024-01-05 01:57:55,986] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M33.o3480250 [2024-01-05 01:57:56,011] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M33.o3480250 [2024-01-05 01:57:56,018] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M28.o3480245 [2024-01-05 01:57:56,021] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M28.o3480245 [2024-01-05 01:57:56,021] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M28.o3480245 [2024-01-05 01:57:56,026] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M28.o3480245 [2024-01-05 01:57:56,042] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M28.o3480245 [2024-01-05 01:57:56,049] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M25.o3480242 [2024-01-05 01:57:56,052] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M25.o3480242 [2024-01-05 01:57:56,052] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M25.o3480242 [2024-01-05 01:57:56,058] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M25.o3480242 [2024-01-05 01:57:56,073] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M25.o3480242 [2024-01-05 01:57:56,080] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M22.o3480239 [2024-01-05 01:57:56,083] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M22.o3480239 [2024-01-05 01:57:56,083] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M22.o3480239 [2024-01-05 01:57:56,088] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M22.o3480239 [2024-01-05 01:57:56,108] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M22.o3480239 [2024-01-05 01:57:56,115] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M48.o3480268 [2024-01-05 01:57:56,118] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M48.o3480268 [2024-01-05 01:57:56,118] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M48.o3480268 [2024-01-05 01:57:56,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M48.o3480268 [2024-01-05 01:57:56,148] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M48.o3480268 [2024-01-05 01:57:56,157] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M2.o3480219 [2024-01-05 01:57:56,162] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M2.o3480219 [2024-01-05 01:57:56,162] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M2.o3480219 [2024-01-05 01:57:56,169] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M2.o3480219 [2024-01-05 01:57:56,186] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M2.o3480219 [2024-01-05 01:57:56,195] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M7.o3480224 [2024-01-05 01:57:56,197] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M7.o3480224 [2024-01-05 01:57:56,198] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M7.o3480224 [2024-01-05 01:57:56,203] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M7.o3480224 [2024-01-05 01:57:56,228] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M7.o3480224 [2024-01-05 01:57:56,234] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M14.o3480231 [2024-01-05 01:57:56,236] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M14.o3480231 [2024-01-05 01:57:56,237] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M14.o3480231 [2024-01-05 01:57:56,242] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M14.o3480231 [2024-01-05 01:57:56,261] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M14.o3480231 [2024-01-05 01:57:56,268] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M32.o3480249 [2024-01-05 01:57:56,272] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M32.o3480249 [2024-01-05 01:57:56,272] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M32.o3480249 [2024-01-05 01:57:56,278] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M32.o3480249 [2024-01-05 01:57:56,299] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M32.o3480249 [2024-01-05 01:57:56,307] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M42.o3480262 [2024-01-05 01:57:56,310] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M42.o3480262 [2024-01-05 01:57:56,310] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M42.o3480262 [2024-01-05 01:57:56,323] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M42.o3480262 [2024-01-05 01:57:56,347] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M42.o3480262 [2024-01-05 01:57:56,354] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M45.o3480265 [2024-01-05 01:57:56,358] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M45.o3480265 [2024-01-05 01:57:56,359] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M45.o3480265 [2024-01-05 01:57:56,368] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M45.o3480265 [2024-01-05 01:57:56,389] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M45.o3480265 [2024-01-05 01:57:56,396] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M20.o3480237 [2024-01-05 01:57:56,399] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 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ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M15.o3480232 [2024-01-05 01:57:56,462] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M15.o3480232 [2024-01-05 01:57:56,469] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M4.o3480221 [2024-01-05 01:57:56,472] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M4.o3480221 [2024-01-05 01:57:56,472] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M4.o3480221 [2024-01-05 01:57:56,477] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M4.o3480221 [2024-01-05 01:57:56,494] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: 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ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M26.o3480243 [2024-01-05 01:57:56,545] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M26.o3480243 [2024-01-05 01:57:56,552] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M26.o3480243 [2024-01-05 01:57:56,569] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M26.o3480243 [2024-01-05 01:57:56,576] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M27.o3480244 [2024-01-05 01:57:56,579] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M27.o3480244 [2024-01-05 01:57:56,579] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: 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[DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M18.o3480235 [2024-01-05 01:57:56,647] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M5.o3480222 [2024-01-05 01:57:56,649] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M5.o3480222 [2024-01-05 01:57:56,650] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M5.o3480222 [2024-01-05 01:57:56,655] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M5.o3480222 [2024-01-05 01:57:56,670] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M5.o3480222 [2024-01-05 01:57:56,677] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M40.o3480260 [2024-01-05 01:57:56,725] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M40.o3480260 [2024-01-05 01:57:56,749] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M40.o3480260 [2024-01-05 01:57:56,757] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M50.o3480270 [2024-01-05 01:57:56,760] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M50.o3480270 [2024-01-05 01:57:56,760] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M50.o3480270 [2024-01-05 01:57:56,766] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M50.o3480270 [2024-01-05 01:57:56,782] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M50.o3480270 [2024-01-05 01:57:56,788] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M43.o3480263 [2024-01-05 01:57:56,791] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M43.o3480263 [2024-01-05 01:57:56,792] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M43.o3480263 [2024-01-05 01:57:56,797] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M43.o3480263 [2024-01-05 01:57:56,814] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M43.o3480263 [2024-01-05 01:57:56,823] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M24.o3480241 [2024-01-05 01:57:56,827] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M24.o3480241 [2024-01-05 01:57:56,827] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M24.o3480241 [2024-01-05 01:57:56,834] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M24.o3480241 [2024-01-05 01:57:56,858] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M24.o3480241 [2024-01-05 01:57:56,865] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M3.o3480220 [2024-01-05 01:57:56,868] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: 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search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:56,933] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:56,938] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Sample_Labels.txt [2024-01-05 01:57:56,959] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M6.o3480223 [2024-01-05 01:57:56,962] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M6.o3480223 [2024-01-05 01:57:56,962] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M6.o3480223 [2024-01-05 01:57:56,967] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M6.o3480223 [2024-01-05 01:57:56,987] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M6.o3480223 [2024-01-05 01:57:56,995] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M44.o3480264 [2024-01-05 01:57:56,997] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M44.o3480264 [2024-01-05 01:57:56,998] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M44.o3480264 [2024-01-05 01:57:57,003] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M44.o3480264 [2024-01-05 01:57:57,022] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M44.o3480264 [2024-01-05 01:57:57,029] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:57,032] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:57,037] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Parameter_Descriptions.txt [2024-01-05 01:57:57,057] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M10.o3480227 [2024-01-05 01:57:57,065] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M10.o3480227 [2024-01-05 01:57:57,066] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M10.o3480227 [2024-01-05 01:57:57,071] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M10.o3480227 [2024-01-05 01:57:57,090] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M10.o3480227 [2024-01-05 01:57:57,096] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M16.o3480233 [2024-01-05 01:57:57,099] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M16.o3480233 [2024-01-05 01:57:57,099] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M16.o3480233 [2024-01-05 01:57:57,105] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M16.o3480233 [2024-01-05 01:57:57,123] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M16.o3480233 [2024-01-05 01:57:57,130] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: 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ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M8.o3480225 [2024-01-05 01:57:57,187] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M8.o3480225 [2024-01-05 01:57:57,202] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M8.o3480225 [2024-01-05 01:57:57,210] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:57,214] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Run_Jobs.sh [2024-01-05 01:57:57,236] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M21.o3480238 [2024-01-05 01:57:57,238] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M21.o3480238 [2024-01-05 01:57:57,239] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M21.o3480238 [2024-01-05 01:57:57,244] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M21.o3480238 [2024-01-05 01:57:57,262] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M21.o3480238 [2024-01-05 01:57:57,277] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M41.o3480261 [2024-01-05 01:57:57,282] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M41.o3480261 [2024-01-05 01:57:57,282] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M41.o3480261 [2024-01-05 01:57:57,291] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M41.o3480261 [2024-01-05 01:57:57,308] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M41.o3480261 [2024-01-05 01:57:57,315] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M19.o3480236 [2024-01-05 01:57:57,318] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M19.o3480236 [2024-01-05 01:57:57,319] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M19.o3480236 [2024-01-05 01:57:57,324] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M19.o3480236 [2024-01-05 01:57:57,340] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M19.o3480236 [2024-01-05 01:57:57,348] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M46.o3480266 [2024-01-05 01:57:57,351] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M46.o3480266 [2024-01-05 01:57:57,351] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M46.o3480266 [2024-01-05 01:57:57,357] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M46.o3480266 [2024-01-05 01:57:57,373] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M46.o3480266 [2024-01-05 01:57:57,386] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M17.o3480234 [2024-01-05 01:57:57,389] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M17.o3480234 [2024-01-05 01:57:57,389] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M17.o3480234 [2024-01-05 01:57:57,396] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M17.o3480234 [2024-01-05 01:57:57,413] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M17.o3480234 [2024-01-05 01:57:57,420] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M34.o3480251 [2024-01-05 01:57:57,424] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M34.o3480251 [2024-01-05 01:57:57,424] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M34.o3480251 [2024-01-05 01:57:57,429] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M34.o3480251 [2024-01-05 01:57:57,443] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M34.o3480251 [2024-01-05 01:57:57,452] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M12.o3480229 [2024-01-05 01:57:57,455] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M12.o3480229 [2024-01-05 01:57:57,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M12.o3480229 [2024-01-05 01:57:57,461] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M12.o3480229 [2024-01-05 01:57:57,479] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M12.o3480229 [2024-01-05 01:57:57,491] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M30.o3480247 [2024-01-05 01:57:57,494] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M30.o3480247 [2024-01-05 01:57:57,509] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M30.o3480247 [2024-01-05 01:57:57,518] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M30.o3480247 [2024-01-05 01:57:57,540] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M30.o3480247 [2024-01-05 01:57:57,548] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Step_08a_G219_G219M39.o3480259 [2024-01-05 01:57:57,550] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Step_08a_G219_G219M39.o3480259 [2024-01-05 01:57:57,551] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Step_08a_G219_G219M39.o3480259 [2024-01-05 01:57:57,557] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Step_08a_G219_G219M39.o3480259 [2024-01-05 01:57:57,574] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Step_08a_G219_G219M39.o3480259 [2024-01-05 01:57:57,581] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:57,584] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:57,584] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:57,596] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:57,608] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.R [2024-01-05 01:57:57,615] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:57,618] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:57,618] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:57,623] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:57,633] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: overlap.sh [2024-01-05 01:57:57,639] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2024-01-05 01:57:57,642] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2024-01-05 01:57:57,648] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Peak_Width_Stats.R [2024-01-05 01:57:57,689] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2024-01-05 01:57:57,693] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.sh [2024-01-05 01:57:57,722] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:57,726] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:57,726] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:57,732] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:57,744] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: Chr_Peak_Counts.R [2024-01-05 01:57:57,772] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: BED_to_WIG.sh [2024-01-05 01:57:57,775] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: BED_to_WIG.sh [2024-01-05 01:57:57,780] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: BED_to_WIG.sh [2024-01-05 01:57:57,829] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,832] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,832] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,837] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,837] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,838] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,845] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: bedToBigBed [2024-01-05 01:57:57,852] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2024-01-05 01:57:57,854] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2024-01-05 01:57:57,860] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: Remove_Outbound_Peaks.pl [2024-01-05 01:57:57,917] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2024-01-05 01:57:57,919] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2024-01-05 01:57:57,919] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2024-01-05 01:57:57,924] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2024-01-05 01:57:57,932] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: MACS2_Peak_Width.txt [2024-01-05 01:57:57,940] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:57,943] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:57,943] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:57,950] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:57,964] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: ENCODE_Blacklist_Overlap_Summary.txt [2024-01-05 01:57:57,970] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: MACS2_Stats.txt [2024-01-05 01:57:57,973] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: MACS2_Stats.txt [2024-01-05 01:57:57,979] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: MACS2_Stats.txt [2024-01-05 01:57:57,989] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,990] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,991] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,991] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,991] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,991] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,992] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,993] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Chr_Peak_Counts.pdf [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,994] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,995] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,996] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M33_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M45_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,997] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M27_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M25_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M24_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M21_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M38_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M16_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M12_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M7_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,998] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M5_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M1_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M17_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M32_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M28_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M9_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:57,999] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M20_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M31_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M10_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M37_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M22_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M19_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,000] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M40_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M3_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M44_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M34_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M13_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M14_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M42_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,001] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M50_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M49_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M48_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M4_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M8_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M15_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M11_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M26_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M46_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M35_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M36_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M43_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M23_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M2_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M47_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,003] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M39_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:58,004] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: Peak_Union.bed [2024-01-05 01:57:58,023] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:58,026] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:58,027] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_alignments.bam [2024-01-05 01:57:58,028] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_sorted_mapped.bam [2024-01-05 01:57:58,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_sorted_mapped.bam.bai [2024-01-05 01:57:58,063] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_alignments.bam.bai [2024-01-05 01:57:58,071] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:58,074] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:58,074] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:58,080] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:58,081] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:58,183] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_read_Peak_Union.out1 [2024-01-05 01:57:58,188] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_filtered_StrgtPks_sorted.bam [2024-01-05 01:57:58,189] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_StrgtPks_tab.bed [2024-01-05 01:57:58,189] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:57:58,190] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_filtered_StrgtPks.bam.bai [2024-01-05 01:57:58,190] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_filtered_StrgtPks.bam [2024-01-05 01:57:58,191] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_StrgtPksRm_tab.bed [2024-01-05 01:57:58,192] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-1-removed.bed [2024-01-05 01:57:58,216] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:58,219] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:58,220] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:58,226] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:58,361] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:57:58,380] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_read_SICER.out1 [2024-01-05 01:57:58,384] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_read_SICER.out1 [2024-01-05 01:57:58,384] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_read_SICER.out1 [2024-01-05 01:57:58,390] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_read_SICER.out1 [2024-01-05 01:57:58,459] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_read_SICER.out1 [2024-01-05 01:57:58,469] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:58,472] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:58,472] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:58,478] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:58,488] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:58,490] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:57:58,550] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland [2024-01-05 01:57:58,560] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland [2024-01-05 01:57:58,560] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland [2024-01-05 01:57:58,566] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland [2024-01-05 01:57:58,622] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41-W400-G2400-E100.scoreisland [2024-01-05 01:57:58,652] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41-W400.graph [2024-01-05 01:57:58,656] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41-W400.graph [2024-01-05 01:57:58,656] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41-W400.graph [2024-01-05 01:57:58,668] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41-W400.graph [2024-01-05 01:57:58,668] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41-W400.graph [2024-01-05 01:57:58,808] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41-W400.graph [2024-01-05 01:57:58,846] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41-W400-normalized.wig [2024-01-05 01:57:58,850] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41-W400-normalized.wig [2024-01-05 01:57:58,851] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41-W400-normalized.wig [2024-01-05 01:57:58,857] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41-W400-normalized.wig [2024-01-05 01:57:59,000] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41-W400-normalized.wig [2024-01-05 01:57:59,008] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:59,008] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:57:59,009] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:57:59,015] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:59,018] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:59,032] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:57:59,033] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:59,033] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:57:59,039] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,041] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,041] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,046] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,046] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,047] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,055] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_RiPPM_norm.bw [2024-01-05 01:57:59,056] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_hist.pdf [2024-01-05 01:57:59,063] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_metrics [2024-01-05 01:57:59,067] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_metrics [2024-01-05 01:57:59,131] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_read_MACS2_peaks.out1 [2024-01-05 01:57:59,134] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_read_MACS2_peaks.out1 [2024-01-05 01:57:59,134] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_read_MACS2_peaks.out1 [2024-01-05 01:57:59,141] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_read_MACS2_peaks.out1 [2024-01-05 01:57:59,141] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_read_MACS2_peaks.out1 [2024-01-05 01:57:59,220] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_read_MACS2_peaks.out1 [2024-01-05 01:57:59,228] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:59,231] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:59,231] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:59,237] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:59,245] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:57:59,272] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:57:59,273] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:57:59,308] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:59,312] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:59,312] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:59,319] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:59,320] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:59,397] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:57:59,405] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_summits.bed [2024-01-05 01:57:59,417] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:59,421] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:59,422] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:59,429] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:59,441] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:57:59,473] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:59,477] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:59,478] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:59,484] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:59,484] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:59,559] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.broadPeak [2024-01-05 01:57:59,588] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:59,591] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:59,592] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:59,598] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:59,599] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:59,675] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M41_broad_MACS2_peaks.gappedPeak [2024-01-05 01:57:59,683] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:57:59,690] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:59,694] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:57:59,707] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:57:59,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:57:59,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:57:59,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:57:59,708] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M41_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:57:59,714] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:57:59,717] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:57:59,717] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_sorted_mapped.bam [2024-01-05 01:57:59,718] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_sorted_mapped.bam.bai [2024-01-05 01:57:59,751] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_alignments.bam [2024-01-05 01:57:59,751] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_alignments.bam.bai [2024-01-05 01:57:59,777] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-1-removed.bed [2024-01-05 01:57:59,813] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_read_SICER.out1 [2024-01-05 01:57:59,816] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_read_SICER.out1 [2024-01-05 01:57:59,817] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_read_SICER.out1 [2024-01-05 01:57:59,823] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_read_SICER.out1 [2024-01-05 01:57:59,895] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_read_SICER.out1 [2024-01-05 01:57:59,904] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:59,907] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:59,907] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:59,913] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:59,921] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland.bb [2024-01-05 01:57:59,930] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland [2024-01-05 01:57:59,933] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland [2024-01-05 01:57:59,934] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland [2024-01-05 01:57:59,944] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland [2024-01-05 01:58:00,008] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100.scoreisland [2024-01-05 01:58:00,057] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30-W400-normalized.wig [2024-01-05 01:58:00,062] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30-W400-normalized.wig [2024-01-05 01:58:00,062] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30-W400-normalized.wig [2024-01-05 01:58:00,069] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30-W400-normalized.wig [2024-01-05 01:58:00,209] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30-W400-normalized.wig [2024-01-05 01:58:00,235] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30-W400.graph [2024-01-05 01:58:00,239] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30-W400.graph [2024-01-05 01:58:00,239] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30-W400.graph [2024-01-05 01:58:00,246] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30-W400.graph [2024-01-05 01:58:00,246] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30-W400.graph [2024-01-05 01:58:00,389] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30-W400.graph [2024-01-05 01:58:00,441] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:58:00,505] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:00,509] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:00,510] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:00,516] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:00,650] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:00,658] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:00,658] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:58:00,665] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:00,668] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:00,684] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:58:00,684] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:00,685] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:58:00,685] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:58:00,691] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:58:00,699] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:58:00,700] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:58:00,706] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:58:00,706] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:58:00,794] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_read_Peak_Union.out1 [2024-01-05 01:58:00,800] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_filtered_StrgtPks.bam.bai [2024-01-05 01:58:00,806] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_filtered_StrgtPks_sorted.bam [2024-01-05 01:58:00,807] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:58:00,807] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_StrgtPks_tab.bed [2024-01-05 01:58:00,807] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_StrgtPksRm_tab.bed [2024-01-05 01:58:00,807] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_filtered_StrgtPks.bam [2024-01-05 01:58:00,814] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,819] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,820] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,825] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,825] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,825] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,825] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,825] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,825] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,826] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,826] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,826] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,833] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_RiPPM_norm.bw [2024-01-05 01:58:00,840] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_metrics [2024-01-05 01:58:00,843] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_metrics [2024-01-05 01:58:00,858] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_hist.pdf [2024-01-05 01:58:00,865] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:00,867] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:00,867] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:00,873] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:00,881] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:00,883] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_summits.bed [2024-01-05 01:58:00,932] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:00,935] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:00,936] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:00,943] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:00,944] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,011] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,028] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,031] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,032] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,037] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,046] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,049] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:58:01,106] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:01,111] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:01,111] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:01,117] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:01,117] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:01,198] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:01,206] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:58:01,239] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,243] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,244] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,250] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,250] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,324] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,343] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M30_read_MACS2_peaks.out1 [2024-01-05 01:58:01,346] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M30_read_MACS2_peaks.out1 [2024-01-05 01:58:01,346] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M30_read_MACS2_peaks.out1 [2024-01-05 01:58:01,353] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M30_read_MACS2_peaks.out1 [2024-01-05 01:58:01,354] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M30_read_MACS2_peaks.out1 [2024-01-05 01:58:01,426] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M30_read_MACS2_peaks.out1 [2024-01-05 01:58:01,431] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:01,431] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:58:01,437] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:01,445] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:01,459] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:58:01,460] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:01,460] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:58:01,460] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M30_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:58:01,465] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:58:01,468] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:58:01,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_sorted_mapped.bam.bai [2024-01-05 01:58:01,469] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_alignments.bam.bai [2024-01-05 01:58:01,499] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_alignments.bam [2024-01-05 01:58:01,499] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_sorted_mapped.bam [2024-01-05 01:58:01,506] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:58:01,509] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:58:01,509] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:58:01,515] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:58:01,515] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:58:01,611] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_read_Peak_Union.out1 [2024-01-05 01:58:01,617] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_filtered_StrgtPks.bam.bai [2024-01-05 01:58:01,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_StrgtPksRm_tab.bed [2024-01-05 01:58:01,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:58:01,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_StrgtPks_tab.bed [2024-01-05 01:58:01,618] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_filtered_StrgtPks.bam [2024-01-05 01:58:01,619] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_filtered_StrgtPks_sorted.bam [2024-01-05 01:58:01,620] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:58:01,627] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:01,629] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:01,629] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:01,637] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:01,648] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:01,651] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:58:01,705] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,709] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,709] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,715] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,715] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,799] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:01,832] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,836] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,837] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,843] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,843] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,917] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:01,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,931] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,931] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,937] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:01,945] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:02,036] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:02,041] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:02,041] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:02,047] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:02,048] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:02,124] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:02,130] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_summits.bed [2024-01-05 01:58:02,166] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_read_MACS2_peaks.out1 [2024-01-05 01:58:02,169] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_read_MACS2_peaks.out1 [2024-01-05 01:58:02,170] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_read_MACS2_peaks.out1 [2024-01-05 01:58:02,176] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_read_MACS2_peaks.out1 [2024-01-05 01:58:02,176] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_read_MACS2_peaks.out1 [2024-01-05 01:58:02,254] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_read_MACS2_peaks.out1 [2024-01-05 01:58:02,258] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:02,265] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:02,269] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:02,289] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:58:02,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:02,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:58:02,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:58:02,290] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:58:02,304] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,308] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,308] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,315] multiqc [DEBUG ] File ignored by vep/vep_html because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,315] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,316] multiqc [DEBUG ] File ignored by stacks/sumstats because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,326] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_RiPPM_norm.bw [2024-01-05 01:58:02,327] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29_hist.pdf [2024-01-05 01:58:02,334] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_metrics [2024-01-05 01:58:02,337] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_metrics [2024-01-05 01:58:02,361] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:58:02,439] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29-W400-normalized.wig [2024-01-05 01:58:02,443] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29-W400-normalized.wig [2024-01-05 01:58:02,444] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29-W400-normalized.wig [2024-01-05 01:58:02,449] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29-W400-normalized.wig [2024-01-05 01:58:02,590] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29-W400-normalized.wig [2024-01-05 01:58:02,599] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-1-removed.bed [2024-01-05 01:58:02,624] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:02,627] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:02,627] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:02,633] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:02,641] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:02,649] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29_read_SICER.out1 [2024-01-05 01:58:02,652] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29_read_SICER.out1 [2024-01-05 01:58:02,653] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29_read_SICER.out1 [2024-01-05 01:58:02,658] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29_read_SICER.out1 [2024-01-05 01:58:02,722] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29_read_SICER.out1 [2024-01-05 01:58:02,764] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland [2024-01-05 01:58:02,769] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland [2024-01-05 01:58:02,769] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland [2024-01-05 01:58:02,775] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland [2024-01-05 01:58:02,842] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100.scoreisland [2024-01-05 01:58:02,868] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29-W400.graph [2024-01-05 01:58:02,872] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29-W400.graph [2024-01-05 01:58:02,872] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29-W400.graph [2024-01-05 01:58:02,879] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M29-W400.graph [2024-01-05 01:58:02,879] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29-W400.graph [2024-01-05 01:58:03,019] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29-W400.graph [2024-01-05 01:58:03,049] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:03,058] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:03,059] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:03,065] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:03,199] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M29-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:03,206] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:03,206] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:58:03,212] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:03,215] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:03,230] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:58:03,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:58:03,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M29-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:58:03,231] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:03,236] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:58:03,239] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:58:03,273] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_sorted_mapped.bam.bai [2024-01-05 01:58:03,273] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_alignments.bam.bai [2024-01-05 01:58:03,273] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_alignments.bam [2024-01-05 01:58:03,274] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_sorted_mapped.bam [2024-01-05 01:58:03,281] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:58:03,283] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:58:03,283] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:58:03,289] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:58:03,289] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:58:03,388] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_read_Peak_Union.out1 [2024-01-05 01:58:03,393] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_filtered_StrgtPks.bam.bai [2024-01-05 01:58:03,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_filtered_StrgtPks_sorted.bam [2024-01-05 01:58:03,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_StrgtPksRm_tab.bed [2024-01-05 01:58:03,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:58:03,394] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_filtered_StrgtPks.bam [2024-01-05 01:58:03,395] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_StrgtPks_tab.bed [2024-01-05 01:58:03,437] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_read_MACS2_peaks.out1 [2024-01-05 01:58:03,440] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_read_MACS2_peaks.out1 [2024-01-05 01:58:03,440] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_read_MACS2_peaks.out1 [2024-01-05 01:58:03,446] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_read_MACS2_peaks.out1 [2024-01-05 01:58:03,446] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_read_MACS2_peaks.out1 [2024-01-05 01:58:03,524] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_read_MACS2_peaks.out1 [2024-01-05 01:58:03,576] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:03,581] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:03,581] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:03,589] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:03,589] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:03,663] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:03,690] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:58:03,730] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:58:03,740] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:03,744] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:03,744] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:03,750] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:03,758] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:03,797] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:03,801] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:03,802] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:03,814] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:03,814] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:03,891] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:03,928] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:03,932] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:03,932] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:03,939] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:03,940] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:04,012] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:04,055] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:04,058] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:04,059] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:04,064] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:04,072] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:04,074] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_summits.bed [2024-01-05 01:58:04,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:58:04,077] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:04,085] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:04,090] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:04,107] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:58:04,107] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:58:04,107] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:04,107] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:58:04,113] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,116] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,116] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,127] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,134] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_RiPPM_norm.bw [2024-01-05 01:58:04,135] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18_hist.pdf [2024-01-05 01:58:04,142] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_metrics [2024-01-05 01:58:04,145] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_metrics [2024-01-05 01:58:04,170] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland [2024-01-05 01:58:04,172] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland [2024-01-05 01:58:04,173] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland [2024-01-05 01:58:04,178] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland [2024-01-05 01:58:04,240] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland [2024-01-05 01:58:04,271] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:04,275] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:04,275] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:04,282] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:04,402] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:04,409] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-1-removed.bed [2024-01-05 01:58:04,452] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:04,455] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:04,455] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:04,460] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:04,468] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:04,521] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18-W400.graph [2024-01-05 01:58:04,525] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18-W400.graph [2024-01-05 01:58:04,526] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18-W400.graph [2024-01-05 01:58:04,532] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M18-W400.graph [2024-01-05 01:58:04,532] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18-W400.graph [2024-01-05 01:58:04,668] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18-W400.graph [2024-01-05 01:58:04,703] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:58:04,739] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18-W400-normalized.wig [2024-01-05 01:58:04,743] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18-W400-normalized.wig [2024-01-05 01:58:04,744] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18-W400-normalized.wig [2024-01-05 01:58:04,751] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18-W400-normalized.wig [2024-01-05 01:58:04,882] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18-W400-normalized.wig [2024-01-05 01:58:04,896] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M18_read_SICER.out1 [2024-01-05 01:58:04,899] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M18_read_SICER.out1 [2024-01-05 01:58:04,900] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M18_read_SICER.out1 [2024-01-05 01:58:04,906] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M18_read_SICER.out1 [2024-01-05 01:58:04,967] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M18_read_SICER.out1 [2024-01-05 01:58:04,972] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:58:04,973] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:04,973] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:58:04,974] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:58:04,979] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:04,988] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:05,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M18-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:58:05,002] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:05,008] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_CKDL230043734-1A_22GGGVLT3_L8_R1.fastq.gz [2024-01-05 01:58:05,010] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_CKDL230043734-1A_22GGGVLT3_L8_R2.fastq.gz [2024-01-05 01:58:05,037] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_sorted_mapped.bam.bai [2024-01-05 01:58:05,038] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_fragments.bed [2024-01-05 01:58:05,039] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_alignments.bam.bai [2024-01-05 01:58:05,039] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_sorted_mapped.bam [2024-01-05 01:58:05,039] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_alignments.bam [2024-01-05 01:58:05,045] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:58:05,047] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:58:05,048] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:58:05,052] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:58:05,052] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:58:05,141] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_read_Peak_Union.out1 [2024-01-05 01:58:05,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_filtered_StrgtPks.bam.bai [2024-01-05 01:58:05,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_filtered_StrgtPks_sorted.bam [2024-01-05 01:58:05,146] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_StrgtPks_tab.bed [2024-01-05 01:58:05,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_filtered_StrgtPks_sorted.bam.bai [2024-01-05 01:58:05,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_StrgtPksRm_tab.bed [2024-01-05 01:58:05,147] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_filtered_StrgtPks.bam [2024-01-05 01:58:05,152] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,155] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,155] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,160] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,161] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,161] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,161] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,161] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,161] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,161] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,168] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_RiPPM_norm.bw [2024-01-05 01:58:05,175] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_metrics [2024-01-05 01:58:05,179] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_metrics [2024-01-05 01:58:05,196] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_hist.pdf [2024-01-05 01:58:05,221] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:05,226] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:05,227] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:05,234] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:05,234] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:05,309] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.gappedPeak [2024-01-05 01:58:05,323] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:05,326] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:05,327] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:05,332] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:05,341] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak.bb [2024-01-05 01:58:05,348] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:05,351] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:05,351] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:05,358] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:05,367] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak.bb [2024-01-05 01:58:05,420] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:05,424] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:05,425] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:05,433] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:05,434] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:05,507] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_broad_MACS2_peaks.broadPeak [2024-01-05 01:58:05,512] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak.bed [2024-01-05 01:58:05,546] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:05,550] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:05,551] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:05,557] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:05,558] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:05,635] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_narrow_MACS2_peaks.narrowPeak [2024-01-05 01:58:05,655] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_summits.bed [2024-01-05 01:58:05,701] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_broad_MACS2_peaks.broadPeak.bed [2024-01-05 01:58:05,745] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_read_MACS2_peaks.out1 [2024-01-05 01:58:05,748] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_read_MACS2_peaks.out1 [2024-01-05 01:58:05,749] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_read_MACS2_peaks.out1 [2024-01-05 01:58:05,757] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6_read_MACS2_peaks.out1 [2024-01-05 01:58:05,757] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_read_MACS2_peaks.out1 [2024-01-05 01:58:05,823] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_read_MACS2_peaks.out1 [2024-01-05 01:58:05,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak_unique.bed [2024-01-05 01:58:05,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:05,828] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak_common.bed [2024-01-05 01:58:05,833] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:05,836] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:05,856] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_Union.bed [2024-01-05 01:58:05,856] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:05,856] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6_narrow_MACS2_peaks.narrowPeak_mm9-blacklist_merged_common.bed [2024-01-05 01:58:05,951] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6-W400.graph [2024-01-05 01:58:05,955] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6-W400.graph [2024-01-05 01:58:05,956] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6-W400.graph [2024-01-05 01:58:05,963] multiqc [DEBUG ] File ignored by vep/vep_txt because it exceeded search pattern filesize limit: G219M6-W400.graph [2024-01-05 01:58:05,963] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6-W400.graph [2024-01-05 01:58:06,100] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6-W400.graph [2024-01-05 01:58:06,131] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:06,135] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:06,136] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:06,142] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:06,286] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100-islandfiltered-normalized.wig [2024-01-05 01:58:06,305] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-W400-G2400-E100-islandfiltered.bed [2024-01-05 01:58:06,315] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:06,319] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:06,320] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:06,325] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:06,332] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland.bb [2024-01-05 01:58:06,342] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland [2024-01-05 01:58:06,344] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland [2024-01-05 01:58:06,345] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland [2024-01-05 01:58:06,350] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland [2024-01-05 01:58:06,411] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6-W400-G2400-E100.scoreisland [2024-01-05 01:58:06,438] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6_read_SICER.out1 [2024-01-05 01:58:06,442] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6_read_SICER.out1 [2024-01-05 01:58:06,442] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6_read_SICER.out1 [2024-01-05 01:58:06,448] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6_read_SICER.out1 [2024-01-05 01:58:06,524] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6_read_SICER.out1 [2024-01-05 01:58:06,598] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: G219M6-W400-normalized.wig [2024-01-05 01:58:06,603] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: G219M6-W400-normalized.wig [2024-01-05 01:58:06,603] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: G219M6-W400-normalized.wig [2024-01-05 01:58:06,612] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: G219M6-W400-normalized.wig [2024-01-05 01:58:06,753] multiqc [DEBUG ] File ignored by nanostat because it exceeded search pattern filesize limit: G219M6-W400-normalized.wig [2024-01-05 01:58:06,770] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-1-removed.bed [2024-01-05 01:58:06,770] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_common.bed [2024-01-05 01:58:06,771] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-W400-G2400-E100.scoreisland_common.bed [2024-01-05 01:58:06,778] multiqc [DEBUG ] File ignored by ccs/v4 because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:06,782] multiqc [DEBUG ] File ignored by lima/summary because it exceeded search pattern filesize limit: Overlap_Summary.txt [2024-01-05 01:58:06,796] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-W400-G2400-E100.scoreisland_mm9-blacklist_Union.bed [2024-01-05 01:58:06,796] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-W400-G2400-E100.scoreisland_mm9-blacklist_merged_common.bed [2024-01-05 01:58:06,796] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: G219M6-W400-G2400-E100.scoreisland_unique.bed [2024-01-05 01:58:06,796] multiqc [DEBUG ] Ignoring file as matched an ignore pattern: mm9-blacklist_unique.bed [2024-01-05 01:58:07,530] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.1.2 [2024-01-05 01:58:09,858] multiqc.modules.macs2.macs2 [INFO ] Found 100 logs [2024-01-05 01:58:09,871] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.1.2 [2024-01-05 01:58:09,980] multiqc.modules.picard.picard [INFO ] Found 50 InsertSizeMetrics reports [2024-01-05 01:58:10,033] multiqc.modules.samtools.samtools [INFO ] Found 50 flagstat reports [2024-01-05 01:58:10,045] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M7_idxstats [2024-01-05 01:58:10,045] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M44_idxstats [2024-01-05 01:58:10,045] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M34_idxstats [2024-01-05 01:58:10,046] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M37_idxstats [2024-01-05 01:58:10,046] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M4_idxstats [2024-01-05 01:58:10,046] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M42_idxstats [2024-01-05 01:58:10,046] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M25_idxstats [2024-01-05 01:58:10,047] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M46_idxstats [2024-01-05 01:58:10,047] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M21_idxstats [2024-01-05 01:58:10,047] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M16_idxstats [2024-01-05 01:58:10,048] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M11_idxstats [2024-01-05 01:58:10,048] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M45_idxstats [2024-01-05 01:58:10,048] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M48_idxstats [2024-01-05 01:58:10,048] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M22_idxstats [2024-01-05 01:58:10,049] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M2_idxstats [2024-01-05 01:58:10,049] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M3_idxstats [2024-01-05 01:58:10,049] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M27_idxstats [2024-01-05 01:58:10,049] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M39_idxstats [2024-01-05 01:58:10,050] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M1_idxstats [2024-01-05 01:58:10,051] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M13_idxstats [2024-01-05 01:58:10,051] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M33_idxstats [2024-01-05 01:58:10,051] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M31_idxstats [2024-01-05 01:58:10,052] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M38_idxstats [2024-01-05 01:58:10,052] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M9_idxstats [2024-01-05 01:58:10,052] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M10_idxstats [2024-01-05 01:58:10,052] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M28_idxstats [2024-01-05 01:58:10,053] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M5_idxstats [2024-01-05 01:58:10,053] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M19_idxstats [2024-01-05 01:58:10,053] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M14_idxstats [2024-01-05 01:58:10,054] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M8_idxstats [2024-01-05 01:58:10,055] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M36_idxstats [2024-01-05 01:58:10,056] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M15_idxstats [2024-01-05 01:58:10,056] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M23_idxstats [2024-01-05 01:58:10,057] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M47_idxstats [2024-01-05 01:58:10,057] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M32_idxstats [2024-01-05 01:58:10,058] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M40_idxstats [2024-01-05 01:58:10,059] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M50_idxstats [2024-01-05 01:58:10,059] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M17_idxstats [2024-01-05 01:58:10,060] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M20_idxstats [2024-01-05 01:58:10,060] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M24_idxstats [2024-01-05 01:58:10,060] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M43_idxstats [2024-01-05 01:58:10,061] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M49_idxstats [2024-01-05 01:58:10,062] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M26_idxstats [2024-01-05 01:58:10,062] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M35_idxstats [2024-01-05 01:58:10,063] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M12_idxstats [2024-01-05 01:58:10,063] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M7_idxstats [2024-01-05 01:58:10,064] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M44_idxstats [2024-01-05 01:58:10,064] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M34_idxstats [2024-01-05 01:58:10,064] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M37_idxstats [2024-01-05 01:58:10,065] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M4_idxstats [2024-01-05 01:58:10,065] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M42_idxstats [2024-01-05 01:58:10,065] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M25_idxstats [2024-01-05 01:58:10,066] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M46_idxstats [2024-01-05 01:58:10,066] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M21_idxstats [2024-01-05 01:58:10,066] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M16_idxstats [2024-01-05 01:58:10,066] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M11_idxstats [2024-01-05 01:58:10,067] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M45_idxstats [2024-01-05 01:58:10,067] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M48_idxstats [2024-01-05 01:58:10,067] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M22_idxstats [2024-01-05 01:58:10,067] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M2_idxstats [2024-01-05 01:58:10,068] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M3_idxstats [2024-01-05 01:58:10,068] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M27_idxstats [2024-01-05 01:58:10,068] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M39_idxstats [2024-01-05 01:58:10,068] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M1_idxstats [2024-01-05 01:58:10,069] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M6_idxstats [2024-01-05 01:58:10,069] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M29_idxstats [2024-01-05 01:58:10,069] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M13_idxstats [2024-01-05 01:58:10,070] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M33_idxstats [2024-01-05 01:58:10,071] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M31_idxstats [2024-01-05 01:58:10,071] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M38_idxstats [2024-01-05 01:58:10,071] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M9_idxstats [2024-01-05 01:58:10,072] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M10_idxstats [2024-01-05 01:58:10,072] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M28_idxstats [2024-01-05 01:58:10,072] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M5_idxstats [2024-01-05 01:58:10,072] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M30_idxstats [2024-01-05 01:58:10,073] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M19_idxstats [2024-01-05 01:58:10,073] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M14_idxstats [2024-01-05 01:58:10,073] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M8_idxstats [2024-01-05 01:58:10,073] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M41_idxstats [2024-01-05 01:58:10,074] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M36_idxstats [2024-01-05 01:58:10,074] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M15_idxstats [2024-01-05 01:58:10,074] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M23_idxstats [2024-01-05 01:58:10,074] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M47_idxstats [2024-01-05 01:58:10,075] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M32_idxstats [2024-01-05 01:58:10,075] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M40_idxstats [2024-01-05 01:58:10,075] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M50_idxstats [2024-01-05 01:58:10,075] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M17_idxstats [2024-01-05 01:58:10,076] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M20_idxstats [2024-01-05 01:58:10,076] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M24_idxstats [2024-01-05 01:58:10,076] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M43_idxstats [2024-01-05 01:58:10,076] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M49_idxstats [2024-01-05 01:58:10,077] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M26_idxstats [2024-01-05 01:58:10,077] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M35_idxstats [2024-01-05 01:58:10,077] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M18_idxstats [2024-01-05 01:58:10,077] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M12_idxstats [2024-01-05 01:58:10,078] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M41_idxstats [2024-01-05 01:58:10,078] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M30_idxstats [2024-01-05 01:58:10,078] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M29_idxstats [2024-01-05 01:58:10,078] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M18_idxstats [2024-01-05 01:58:10,079] multiqc.modules.samtools.idxstats [DEBUG ] Duplicate sample name found! Overwriting: G219M6_idxstats [2024-01-05 01:58:10,090] multiqc.modules.samtools.samtools [INFO ] Found 50 idxstats reports [2024-01-05 01:58:10,097] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M12_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,100] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M9_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,101] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M45_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,102] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M49_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,103] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M38_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,105] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M50_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,106] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M33_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,107] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M40_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,109] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M30_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,110] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M42_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,111] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M10_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,113] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M16_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,114] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M17_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,116] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M6_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,118] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M32_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,120] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M47_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,121] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M2_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,123] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M36_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,125] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M4_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,126] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M11_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,127] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M34_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,128] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M14_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,129] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M37_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,131] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M28_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,132] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M35_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,134] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M41_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,135] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M20_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,136] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M44_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,139] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M48_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,141] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M21_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,142] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M5_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,143] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M31_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,144] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M8_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,146] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M27_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,148] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M23_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,149] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M25_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,150] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M15_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,151] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M46_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,153] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M13_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,154] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M26_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,155] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M39_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,157] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M3_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,159] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M18_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,160] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M22_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,161] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M19_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,163] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M24_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,164] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M43_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,165] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M7_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,167] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M29_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,168] multiqc.modules.bowtie2.bowtie2 [DEBUG ] Found a bowtie2 command, updating sample name to 'G219M1_CKDL230043734-1A_22GGGVLT3_L8_R1' [2024-01-05 01:58:10,169] multiqc.modules.bowtie2.bowtie2 [INFO ] Found 51 reports [2024-01-05 01:58:15,697] multiqc.modules.fastqc.fastqc [INFO ] Found 100 reports [2024-01-05 01:58:18,690] multiqc [INFO ] Compressing plot data [2024-01-05 01:58:20,833] multiqc [INFO ] Report : Job_Summary/G219_MULTIQC/multiqc_report.html [2024-01-05 01:58:20,842] multiqc [INFO ] Data : Job_Summary/G219_MULTIQC/multiqc_data [2024-01-05 01:58:20,842] multiqc [DEBUG ] Moving data file from '/scratch/tmpufrhw21v/multiqc_data' to 'Job_Summary/G219_MULTIQC/multiqc_data' [2024-01-05 01:58:20,991] multiqc [INFO ] MultiQC complete