FastQCFastQC Report
Fri 2 Jun 2017
G102C_T1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG102C_T1.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences94597992
Sequences flagged as poor quality0
Sequence length40
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA52150.014.9362911
ATCGGAA55550.013.8034452
CGTCTGA63850.011.76748316
ACACGTC69200.011.00519713
ACGTCTG78400.09.822115
TCGGAAG92600.08.4825413
CACGTCT97200.08.18475114
CGGAAGA111100.07.085364
CACACGT120650.06.88981312
GCACACG135550.06.282960411
Produced by FastQC (version 0.11.2)