FastQCFastQC Report
Fri 2 Jun 2017
G102C_T2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG102C_T2.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences53862078
Sequences flagged as poor quality0
Sequence length40
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA68100.026.3466151
ATCGGAA71050.025.0534632
CGTCTGA74650.023.5684416
ACACGTC79650.022.38791313
ACGTCTG82850.021.44094815
TCGGAAG91500.019.5469863
CACGTCT94750.019.08913814
CGGAAGA100750.017.819854
CACACGT110800.016.40067912
GCACACG116450.015.53200911
CCTTGTA148050.011.7228633
CTTGTAA158150.010.93724434
GAACTCC175300.010.69698621
ACCTTGT172150.010.14097232
AGTCACC177400.09.87918928
TCTGAAC189550.09.86561618
TCCAGTC193750.09.5987725
CACCTTG182500.09.58448331
GTCACCT186500.09.4427229
GTCTGAA200950.09.32245617
Produced by FastQC (version 0.11.2)