FastQCFastQC Report
Fri 2 Jun 2017
G111C_M11.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG111C_M11.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22039079
Sequences flagged as poor quality0
Sequence length40
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC2100.018.6144716
CACGACG2800.013.35391815
CGACGCT2900.012.893146517
GATCGGA6100.011.1453821
ATCGGAA8150.08.1330992
ACACGAC7100.07.18136514
TACACGA7700.06.842488313
CGTCTGA10850.06.57902716
ACACGTC11700.06.101077613
CTACACG8954.7293724E-115.886633412
TCGGAAG11350.05.8400663
ACGTCTG12150.05.595356515
GACGCTC7807.9708116E-85.447254718
Produced by FastQC (version 0.11.2)