G113-M6_CGATGTAT_AC67REANXX_L002_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G113-M6_CGATGTAT_AC67REANXX_L002_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	250000
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	2924	1.1696	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ATCTCGG	380	43.42105	35
GTCGTGT	375	43.413334	13
CGTCGTG	365	43.397263	12
GGTCGCC	360	43.38889	43
AGCGTCG	355	43.38028	10
GCGTCGT	355	43.38028	11
GTCGCCG	365	42.79452	44
AAGAGCG	355	42.760563	7
GATCGGA	395	42.329113	1
TCGTGTA	390	42.307693	14
CTCGGTG	390	42.307693	37
GATCTCG	390	42.307693	34
CGTGTAG	380	42.263157	15
GAGCGTC	355	42.140846	9
TCGGTGG	410	41.853657	38
TCTCGGT	395	41.772152	36
GTGGTCG	385	41.714287	41
TGGTCGC	380	41.68421	42
ATCGGAA	405	41.28395	2
CGGTGGT	420	40.857143	39