G115_M1-M4.R2.fastq FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	G115_M1-M4.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	194406697
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTCGTG	7470	0.0	9.983031	12
GCGTCGT	7800	0.0	9.955507	11
AGCGTCG	9665	0.0	8.079969	10
TCGTGTA	10995	0.0	7.262643	14
GTGGTCG	11240	0.0	6.968202	41
GATCGGA	12080	0.0	6.8652754	1
TGGTCGC	11710	0.0	6.650274	42
CGTGTAG	12525	0.0	6.480858	15
GTCGTGT	12380	0.0	6.379067	13
GATCTCG	13135	0.0	6.248267	34
ATCGGAA	14325	0.0	6.004346	2
ATCTCGG	15675	0.0	5.348082	35
GAGCGTC	16020	0.0	5.2866607	9
GTCGCCG	15680	0.0	5.1487722	44
TCGGTGG	17460	0.0	5.0911145	38
AGAGCGT	17295	0.0	5.074994	8
TCTCGGT	17200	0.0	5.0146203	36