G116-M13_GAGTGG_BC72YLANXX_L008_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G116-M13_GAGTGG_BC72YLANXX_L008_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27630660
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGTGGATATCTCGTAT	733362	2.654160269787258	TruSeq Adapter, Index 7 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	92420	43.46477	1
ATCGGAA	93110	43.09891	2
TCGGAAG	94200	42.767693	3
CGTCTGA	94880	42.606983	16
CTCGTAT	86905	42.594402	44
ACACGTC	94980	42.580647	13
ACGTCTG	95590	42.47688	15
GTCACGA	92545	42.43435	29
ACGAGTG	91565	42.38171	32
CGGAAGA	94595	42.368004	4
TCTCGTA	81840	42.299046	43
TATCTCG	81750	42.275482	41
CACGAGT	91970	42.25725	31
CGAGTGG	91695	42.254463	33
TCACGAG	92765	42.193832	30
AGTCACG	94260	42.16393	28
CACGTCT	96195	42.111416	14
GCACACG	96480	41.94827	11
ATCTCGT	82475	41.925243	42
CACACGT	96900	41.82773	12