G116-M13_GAGTGG_BC72YLANXX_L008_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G116-M13_GAGTGG_BC72YLANXX_L008_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27630660
Sequences flagged as poor quality	0
Sequence length	50
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	776370	2.8098134463671878	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	87230	43.604572	44
GCGTCGT	89745	43.541992	11
CGTCGTG	89980	43.528492	12
AGCGTCG	89605	43.524036	10
GATCGGA	90530	43.512203	1
ATCGGAA	90795	43.30185	2
GAGCGTC	90045	43.28449	9
TGGTCGC	87845	43.207245	42
GGTCGCC	87895	43.188843	43
TCGTGTA	90105	43.124714	14
GTCGTGT	90940	43.117516	13
GTGGTCG	88565	43.095528	41
AGAGCGT	91045	42.999523	8
GATCTCG	89940	42.99595	34
CGTGTAG	90915	42.92748	15
TCGGAAG	91780	42.92038	3
CGGTGGT	89985	42.87173	39
TCGGTGG	90775	42.82834	38
AAGAGCG	91250	42.82315	7
ATCTCGG	90330	42.798134	35