G116-M14_ACTGAT_BC72YLANXX_L008_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G116-M14_ACTGAT_BC72YLANXX_L008_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22578374
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	488576	2.1639113604903524	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	55435	43.61448	44
CGTCGTG	57460	43.429768	12
AGCGTCG	57135	43.40696	10
GCGTCGT	57280	43.397297	11
GATCGGA	58265	43.25871	1
TGGTCGC	55840	43.183666	42
GGTCGCC	56025	43.1021	43
GTGGTCG	56235	43.084682	41
ATCGGAA	58435	43.067604	2
GAGCGTC	57720	42.963215	9
GTCGTGT	58270	42.94317	13
TCGTGTA	57800	42.908886	14
GATCTCG	57180	42.890717	34
CGTGTAG	58235	42.784958	15
TCGGTGG	57455	42.77353	38
CGGTGGT	57045	42.764606	39
TCGGAAG	58910	42.76283	3
TCTCGGT	57310	42.697426	36
AGAGCGT	58395	42.68853	8
AAGAGCG	58435	42.677464	7