G116-M9_GATCAG_BC72YLANXX_L008_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G116-M9_GATCAG_BC72YLANXX_L008_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23459568
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	603916	2.574284402850044	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	67420	43.570354	44
AGCGTCG	69740	43.475132	10
GCGTCGT	69800	43.450554	11
CGTCGTG	70065	43.443172	12
GATCGGA	70775	43.366302	1
GAGCGTC	70010	43.184944	9
ATCGGAA	70970	43.168423	2
TGGTCGC	67915	43.12678	42
GTGGTCG	68385	43.107574	41
GTCGTGT	70900	43.04641	13
TCGTGTA	70235	43.00975	14
GATCTCG	69395	43.00487	34
GGTCGCC	68190	42.96375	43
TCGGAAG	71665	42.864784	3
AGAGCGT	70955	42.8452	8
CGTGTAG	70740	42.840256	15
CGGTGGT	69510	42.826084	39
TCGGTGG	70020	42.781296	38
AAGAGCG	71070	42.75411	7
TCTCGGT	69710	42.728466	36