G117-M2_CGATGT_BC72YLANXX_L007_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G117-M2_CGATGT_BC72YLANXX_L007_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23186862
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	359469	1.5503132765442775	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCGCCG	41835	43.47368	44
AGCGTCG	43460	43.39802	10
GCGTCGT	43330	43.381203	11
CGTCGTG	43440	43.33202	12
GATCGGA	44645	42.996754	1
GTCGTGT	43980	42.900276	13
TGGTCGC	42090	42.895588	42
GTGGTCG	42570	42.890614	41
GGTCGCC	42340	42.83804	43
GAGCGTC	44110	42.713364	9
TCGTGTA	43690	42.707043	14
ATCGGAA	44845	42.703125	2
GATCTCG	44250	42.694218	34
CGTGTAG	44360	42.483837	15
TCGGTGG	44385	42.431133	38
ATCTCGG	44585	42.349384	35
TCTCGGT	44350	42.281025	36
CGGTGGT	43905	42.25345	39
AGAGCGT	44925	42.17349	8
TCGGAAG	45575	42.16161	3