G118-M11_ACTGAT-_AC6PMVANXX_L003_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G118-M11_ACTGAT-_AC6PMVANXX_L003_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3560036
Sequences flagged as poor quality	0
Sequence length	125
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTCTTTGTCTCCCATTTGAGCATTTCAGTGTGGGCCTTGGCATGGAAGCA	3056922	85.86772718028695	No Hit
CTCTTTGTCTCCCATTAACCATACTTACCAGATCGGAAGAGCGTCGTGTA	33362	0.9371253549121413	Illumina Single End PCR Primer 1 (100% over 21bp)
CTCTTTGTCTCCCATTTTAGCATTTCAGTGTGGGCCTTGGCATGGAAGCA	5297	0.14879063020711028	No Hit
CTCTTTGTCTCCCCTTTGAGCATTTCAGTGTGGGCCTTGGCATGGAAGCA	4836	0.13584132295291396	No Hit
CTCTTTTTCTCCCATTTGAGCATTTCAGTGTGGGCCTTGGCATGGAAGCA	4199	0.11794824546718066	No Hit
CTCTTTGTCTCCCGTTTGAGCATTTCAGTGTGGGCCTTGGCATGGAAGCA	3944	0.1107853965521697	No Hit
CTCTTTGTCTCCCATTTGAGCATTTCAGTGTGGGCCTTGGCATGGCAGCA	3599	0.10109448331421368	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTCCC	332305	118.89078	7
TGTCTCC	333680	118.86805	6
CTTTGTC	335235	118.863335	3
TCTTTGT	336380	118.85143	2
TTGTCTC	335030	118.84727	5
CTCCCAT	331275	118.84015	9
TCTCCCA	331490	118.82948	8
CTCTTTG	335525	118.81202	1
TTTGTCT	336400	118.697556	4
GTCTCCT	755	106.39073	7
TCTCGCA	310	105.56451	8
GTATCCC	485	104.27836	7
CTCCCGT	820	102.310974	9
TGTCTCG	350	101.99999	6
CTCCGAT	240	101.64583	9
TCGCCCA	160	100.40626	8
GTCTACC	575	100.37392	7
TGTCTAC	615	99.650406	6
TCTCCCG	895	98.39105	8
TCTCCCC	1335	98.05244	8