G116-M2_CGATGT_BC72YLANXX_L008_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G116-M2_CGATGT_BC72YLANXX_L008_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	26637024
Sequences flagged as poor quality	0
Sequence length	50
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	565117	2.1215470617138013	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGCGTCG	65790	43.660667	10
GCGTCGT	65895	43.641163	11
CGTCGTG	66065	43.632236	12
GTCGCCG	64400	43.62129	44
GATCGGA	66715	43.55293	1
GAGCGTC	66165	43.3567	9
ATCGGAA	66985	43.27739	2
TGGTCGC	64835	43.18981	42
GTCGTGT	67100	43.175472	13
GGTCGCC	65035	43.10935	43
GTGGTCG	65485	43.081158	41
TCGTGTA	66640	43.028667	14
TCGGAAG	67600	42.97923	3
GATCTCG	66535	42.9688	34
AGAGCGT	67230	42.94788	8
CGTGTAG	67140	42.92173	15
AAGAGCG	67335	42.87389	7
TCGGTGG	67325	42.817623	38
CGGTGGT	66845	42.736603	39
CGGAAGA	67395	42.722363	4