G121_M1-M6.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G121_M1-M6.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	162581123
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	3361279	2.0674472767665653	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	512120	43.35574	11
CGTCGTG	513515	43.3464	12
AGCGTCG	510795	43.34053	10
GTCGCCG	389310	43.24966	44
GATCGGA	514830	43.2313	1
ATCGGAA	515410	43.092384	2
TCGTGTA	517285	42.965427	14
GTCGTGT	519745	42.95258	13
GAGCGTC	515880	42.88288	9
TGGTCGC	388375	42.851288	42
CGTGTAG	519510	42.824608	15
GATCTCG	431080	42.73867	34
GTGGTCG	401775	42.677597	41
GGTCGCC	394570	42.639034	43
AGAGCGT	521220	42.6143	8
ATCTCGG	438580	42.552605	35
TCGGAAG	523145	42.530373	3
AAGAGCG	520575	42.440918	7
TCGGTGG	447035	42.30458	38
TCTCGGT	432640	42.277348	36