G121_M1M2M3.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G121_M1M2M3.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	82778347
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC	97926	0.11829905228718811	TruSeq Adapter, Index 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	238340	43.19468	1
ATCGGAA	239170	42.891865	2
CGTATGC	239055	42.512474	44
ACACGTC	243930	42.485733	13
CGTCTGA	243475	42.476643	16
CTCGTAT	234360	42.41189	42
TCGTATG	239775	42.39845	43
TCTCGTA	220770	42.38322	41
TCGGAAG	243215	42.299423	3
ACGTCTG	245085	42.29354	15
CGATGTA	158225	42.13208	34
CGGAAGA	244455	42.080727	4
ATCTCGT	222585	41.990253	40
CACGTCT	247405	41.92901	14
CACCGAT	161290	41.880474	31
TATCTCG	150365	41.80864	39
ACCGATG	161175	41.761543	32
CCGATGT	160520	41.687714	33
CACACGT	251245	41.32578	12
TCACCGA	164800	41.31178	30