G121_M4M5M6.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G121_M4M5M6.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	79802776
Sequences flagged as poor quality	0
Sequence length	50
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGC	826050	1.0351143674500747	TruSeq Adapter, Index 4 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	287680	43.422337	1
ATCGGAA	288740	43.15084	2
CGTCTGA	293295	42.795013	16
CGTATGC	289075	42.728382	44
ACACGTC	294425	42.722607	13
ACGTCTG	295095	42.640575	15
TCGGAAG	292890	42.640453	3
CTCGTAT	280840	42.596397	42
TCGTATG	290255	42.546062	43
TCTCGTA	264730	42.533897	41
CGGAAGA	293765	42.44557	4
ATCTCGT	265615	42.302074	40
CACGTCT	297625	42.298748	14
CGCCAAT	108600	42.10007	33
GCACACG	300985	41.809837	11
CACACGT	301370	41.803104	12
TATCTCG	102770	41.71156	39
GTCACGC	112000	41.663815	29
ACGCCAA	110725	41.50303	32
AATCTCG	95030	41.344017	39