G128-M2_CGATGT_BC8GTYANXX_L001_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M2_CGATGT_BC8GTYANXX_L001_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13755278
Sequences flagged as poor quality	0
Sequence length	50
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC	403529	2.933630276320115	TruSeq Adapter, Index 2 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	83729	0.6087045278183401	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	53060	43.360332	1
ATCGGAA	53480	42.988266	2
CGTATGC	53080	42.808456	44
ACACGTC	54340	42.771984	13
ACGTCTG	54555	42.73364	15
CGTCTGA	54450	42.680603	16
CTCGTAT	52290	42.554764	42
CCGATGT	52450	42.533726	33
TCACCGA	52670	42.523464	30
TCGTATG	53635	42.504482	43
CGATGTA	52330	42.48959	34
CACGTCT	54970	42.44148	14
CACCGAT	52570	42.41261	31
TCGGAAG	54660	42.31758	3
CACACGT	54520	42.30376	12
ACCGATG	53115	42.30036	32
TATCTCG	48425	42.263504	39
CGGAAGA	54130	42.232018	4
TCTCGTA	48995	42.133762	41
GTCACCG	53545	42.127445	29