G128-M6_GCCAAT_BC8GTYANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M6_GCCAAT_BC8GTYANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12121107
Sequences flagged as poor quality	0
Sequence length	50
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	482353	3.979446761752041	Illumina Single End PCR Primer 1 (100% over 50bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	61020	0.5034193659044508	No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40320	0.3326428848454188	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	13796	0.11381798708649302	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	54840	42.789833	1
GATCTCG	54590	42.775593	34
TCGTGTA	53845	42.756454	14
ATCTCGG	54775	42.631645	35
ATCGGAA	54775	42.615555	2
CGTGTAG	54255	42.59554	15
TCTCGGT	54950	42.58393	36
GTGGTCG	54715	42.538055	41
AGAGCGT	54885	42.532993	8
GTCGTGT	54640	42.477116	13
GTAGATC	55175	42.46995	31
CGTCGTG	54695	42.431076	12
CTCGGTG	55220	42.284283	37
GCGTCGT	54895	42.2758	11
TGGTCGC	54865	42.271854	42
GTAGGGA	54705	42.229763	18
GGTCGCC	54885	42.19774	43
TCGGTGG	55475	42.18921	38
AAGAGCG	55550	42.111366	7
CGGTGGT	55430	42.104073	39