G128-M2-B_CGATGT_AC8WFRANXX_L001_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M2-B_CGATGT_AC8WFRANXX_L001_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12534690
Sequences flagged as poor quality	0
Sequence length	50
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	333288	2.6589249514746673	Illumina Single End PCR Primer 1 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	80598	0.6429995476553468	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	25241	0.2013691603063179	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	43265	43.161144	1
AGAGCGT	44545	43.044563	8
TCGTGTA	43695	43.010918	14
ATCGGAA	43185	42.955814	2
CGTCGTG	44780	42.877625	12
GTCGTGT	45210	42.868813	13
CGTGTAG	43870	42.75911	15
GCGTCGT	45075	42.650517	11
GATCTCG	43620	42.61199	34
GTGGTCG	43470	42.60966	41
ATCTCGG	43645	42.59766	35
TCTCGGT	44290	42.533627	36
AAGAGCG	44150	42.30357	7
GGTCGCC	43150	42.289486	43
GAGCGTC	44870	42.227795	9
CTCGGTG	44315	42.17206	37
TCGGTGG	45210	42.14195	38
GTAGATC	44295	42.133778	31
AGCGTCG	45130	42.08184	10
TCGGAAG	44375	42.05176	3