G128-M6-B_GCCAAT_AC8WFRANXX_L001_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G128-M6-B_GCCAAT_AC8WFRANXX_L001_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11260734
Sequences flagged as poor quality	0
Sequence length	50
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCCAATATCTCGTATGC	416133	3.695434063179185	TruSeq Adapter, Index 6 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	54649	0.4853058424077862	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	48115	43.698948	1
ATCGGAA	48515	43.126312	2
ACACGTC	48345	42.736477	13
CGTATGC	48450	42.7044	44
CGTCTGA	48480	42.703686	16
CGCCAAT	48305	42.6673	33
ACGTCTG	48640	42.631054	15
TCGGAAG	49210	42.557465	3
ACGCCAA	48725	42.517384	32
CTCGTAT	48295	42.50893	42
GTCACGC	49170	42.449535	29
CACACGT	48870	42.44392	12
CACGTCT	48720	42.430107	14
TCGTATG	49105	42.403576	43
TATCTCG	46645	42.30438	39
AGTCACG	49455	42.22139	28
CGGAAGA	49400	42.215656	4
TCTCGTA	47350	41.898438	41
CCAATAT	47820	41.464928	35
GCCAATA	49540	41.451538	34