G129-M1_ATCACG_AC8VLWANXX_L007_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G129-M1_ATCACG_AC8VLWANXX_L007_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17441727
Sequences flagged as poor quality	0
Sequence length	50
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATCTCGTATGC	861361	4.938507522792897	TruSeq Adapter, Index 1 (100% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATCACGATATCGTATGC	19250	0.11036751119886236	TruSeq Adapter, Index 1 (98% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	102740	43.542942	1
ATCGGAA	103495	43.094093	2
CGTATGC	103175	42.880974	44
ACACGTC	104680	42.872902	13
ACGTCTG	105055	42.803627	15
CGTCTGA	104645	42.784233	16
CTCGTAT	100290	42.593258	42
TCGTATG	104145	42.574833	43
TCGGAAG	104785	42.563564	3
CACACGT	105490	42.562473	12
CACGTCT	105735	42.513783	14
ATCACGA	102455	42.39771	34
ACGATCT	94225	42.39671	37
TCACGAT	96800	42.386314	35
CGGAAGA	105060	42.252983	4
CACGATC	94385	42.224373	36
TCTCGTA	96015	42.19095	41
GCACACG	106260	42.146393	11
CGATCTC	95895	41.953934	38
GATCTCG	96125	41.935947	39