G129-M1_ATCACG_AC8VLWANXX_L007_001.R2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G129-M1_ATCACG_AC8VLWANXX_L007_001.R2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17441727
Sequences flagged as poor quality	0
Sequence length	50
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	816254	4.679892077200842	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCGTCGT	99315	43.339493	11
CGTCGTG	99365	43.25323	12
TCGTGTA	98060	43.223137	14
GTCGTGT	100550	43.11979	13
AGCGTCG	98725	43.095028	10
CGTGTAG	98415	43.073807	15
ATCGGAA	98040	43.0402	2
GATCGGA	98790	43.025597	1
GATCTCG	98195	42.97029	34
TCTCGGT	99275	42.960796	36
AGAGCGT	99660	42.939583	8
GTAGGGA	96705	42.878387	18
TGTAGGG	100260	42.852253	17
GTAGATC	99225	42.82601	31
GTCGCCG	96830	42.805656	44
TGGTCGC	96905	42.736877	42
GAGCGTC	99475	42.70618	9
GTGGTCG	98345	42.69175	41
ATCTCGG	99085	42.6846	35
GTGTAGG	100885	42.592823	16