G129-M4_TGACCA_AC8VLWANXX_L007_001.R1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	G129-M4_TGACCA_AC8VLWANXX_L007_001.R1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	15829129
Sequences flagged as poor quality	0
Sequence length	50
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGACCAATCTCGTATGC	743785	4.698837188072698	TruSeq Adapter, Index 4 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	87320	43.560177	1
ATCGGAA	87555	43.25362	2
ACACGTC	88795	42.81063	13
CGTATGC	87975	42.782265	44
CGTCTGA	88960	42.70897	16
ACGTCTG	89325	42.667442	15
CACACGT	89510	42.5129	12
CTCGTAT	85590	42.48707	42
TCGTATG	88800	42.47213	43
CACGTCT	89700	42.4719	14
TCTCGTA	82095	42.27149	41
AATCTCG	81370	42.255657	39
CGGAAGA	89400	42.11244	4
TCGGAAG	89950	42.08973	3
ATCTCGT	82310	42.05709	40
GCACACG	90230	42.0542	11
GACCAAT	83230	42.03972	35
ACCAATC	81430	41.828922	36
ACTGACC	89420	41.60141	32
TGACCAA	89180	41.326477	34