FastQCFastQC Report
Tue 27 Jun 2017
G155-M3-Index20_GTGGCC-_ACB6A7ANXX_L008_001.R1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG155-M3-Index20_GTGGCC-_ACB6A7ANXX_L008_001.R1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21336241
Sequences flagged as poor quality0
Sequence length50
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA6400.010.3127591
ATCGGAA7850.08.1277072
CTCGTAT6554.1836756E-118.06062944
TCTCGTA6951.2532837E-97.28026443
CGTCTGA11851.4551915E-115.940785416
ACACGTC12152.7284841E-115.79397713
ATCTCGT11953.6543497E-95.338896342
ACGTCTG16903.6379788E-125.07675315
Produced by FastQC (version 0.11.2)