FastQCFastQC Report
Fri 14 Dec 2018
Male_Hi_combined.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameMale_Hi_combined.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences175671072
Sequences flagged as poor quality0
Sequence length40
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.7)