FastQCFastQC Report
Fri 24 Jun 2016
G74A_M1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG74A_M1.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences26280201
Sequences flagged as poor quality0
Sequence length40
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA10650.07.6651842
GATCGGA9350.07.64381461
CGGTTCA11350.06.438974412
AGCGGTT13700.06.20263510
ATGCCGA11250.06.044043525
AGACCGC12550.05.556007431
GACCGCT13200.05.41125532
GAGCGGT15700.05.30426079
CGAGACC14550.05.25998629
Produced by FastQC (version 0.11.2)