FastQCFastQC Report
Fri 24 Jun 2016
G74A_M2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameG74A_M2.fastq
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences16357624
Sequences flagged as poor quality0
Sequence length40
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA5452.1282176E-107.49338441
ATCGGAA6605.456968E-127.21558332
CGGTTCA6702.8412614E-96.34182812
ATGCCGA6551.1610609E-86.22854925
GCGGTTC9702.2646418E-95.256123511
AGCGGTT9056.949813E-85.070271510
AGACCGT7455.5073924E-65.022298331
Produced by FastQC (version 0.11.2)